RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 RNF149Q8NC42 400 aa12.44□□□□□ -0.42
CLPB-208ENST00000538021 SLC7A14Q8TBB6 771 aa12.44□□□□□ -0.42
CLPB-208ENST00000538021 HASPINQ8TF76 798 aa12.44□□□□□ -0.42
CLPB-208ENST00000538021 PSPC1Q8WXF1 523 aaKnown RBP12.44□□□□□ -0.42
CLPB-208ENST00000538021 CPB2Q96IY4 423 aa12.44□□□□□ -0.42
CLPB-208ENST00000538021 CLSTN3Q9BQT9 956 aa12.44□□□□□ -0.42
CLPB-208ENST00000538021 PLA2G2FQ9BZM2 168 aa12.44□□□□□ -0.42
CLPB-208ENST00000538021 TRIM6Q9C030 488 aaPredicted RBP12.44□□□□□ -0.42
CLPB-208ENST00000538021 LSG1Q9H089 658 aaKnown RBP12.44□□□□□ -0.42
CLPB-208ENST00000538021 CHRDQ9H2X0 955 aa12.44□□□□□ -0.42
CLPB-208ENST00000538021 CACNG4Q9UBN1 327 aa12.44□□□□□ -0.42
CLPB-208ENST00000538021 MRPS23Q9Y3D9 190 aaKnown RBP12.44□□□□□ -0.42
CLPB-208ENST00000538021 FAM208BQ5VWN6 2430 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 EDIL3O43854 480 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 ECI2O75521 394 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 HOXB3P14651 431 aaPredicted RBP12.43□□□□□ -0.42
CLPB-208ENST00000538021 AKAP5P24588 427 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 PMLP29590 882 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 HOXA9P31269 272 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 ADD1P35611 737 aaKnown RBP12.43□□□□□ -0.42
CLPB-208ENST00000538021 CCR3P51677 355 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 PSMC5P62195 406 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 NCBP1Q09161 790 aaKnown RBP12.43□□□□□ -0.42
CLPB-208ENST00000538021 AXDND1Q5T1B0 1012 aaPredicted RBP12.43□□□□□ -0.42
CLPB-208ENST00000538021 FAM171A1Q5VUB5 890 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 HACE1Q8IYU2 909 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 BICD2Q8TD16 824 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 CEP170P1Q96L14 293 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 TTPALQ9BTX7 342 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 LMAN1LQ9HAT1 526 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 KLK14Q9P0G3 267 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 DNMT3BQ9UBC3 853 aaKnown RBP12.43□□□□□ -0.42
CLPB-208ENST00000538021 KCNH3Q9ULD8 1083 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 GIT1Q9Y2X7 761 aa12.43□□□□□ -0.42
CLPB-208ENST00000538021 RALGAPA1Q6GYQ0 2036 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 SHISA7A6NL88 538 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 MAN2B1O00754 1011 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 ADAM12O43184 909 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 TSPAN1O60635 241 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 AXLP30530 894 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 USP11P51784 963 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 SRSF5Q13243 272 aaKnown RBP12.42□□□□□ -0.42
CLPB-208ENST00000538021 GRM2Q14416 872 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 HSP90AA2PQ14568 343 aaPredicted RBP12.42□□□□□ -0.42
CLPB-208ENST00000538021 ACAP1Q15027 740 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 NECTIN1Q15223 517 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 AASDHQ4L235 1098 aaPredicted RBP12.42□□□□□ -0.42
CLPB-208ENST00000538021 TANGO2Q6ICL3 276 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 ZNF579Q8NAF0 562 aaKnown RBP12.42□□□□□ -0.42
CLPB-208ENST00000538021 GSTCDQ8NEC7 633 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 LNX1Q8TBB1 728 aaPredicted RBP12.42□□□□□ -0.42
CLPB-208ENST00000538021 CCDC51Q96ER9 411 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 PAAF1Q9BRP4 392 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 CSRNP2Q9H175 543 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 NXF3Q9H4D5 531 aaKnown RBP12.42□□□□□ -0.42
CLPB-208ENST00000538021 BRD9Q9H8M2 597 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 PARP2Q9UGN5 583 aa12.42□□□□□ -0.42
CLPB-208ENST00000538021 CNOT1A5YKK6 2376 aaKnown RBP12.42□□□□□ -0.42
CLPB-208ENST00000538021 SPEGQ15772 3267 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 CASTOR2A6NHX0 329 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 CHURC1-FNTBB4DL54 471 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 INO80B-WBP1J3KQ70 363 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 HRO43593 1189 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 FOXD2O60548 495 aaPredicted RBP12.41□□□□□ -0.42
CLPB-208ENST00000538021 TDP2O95551 362 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 CXCL12P48061 93 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 FNTBP49356 437 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 EXOSC10Q01780 885 aaKnown RBP12.41□□□□□ -0.42
CLPB-208ENST00000538021 SATB1Q01826 763 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 AKAP17AQ02040 695 aaKnown RBP12.41□□□□□ -0.42
CLPB-208ENST00000538021 GRIK3Q13003 919 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 Q4G0T1 1027 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 B3GNT9Q6UX72 402 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 DHX32Q7L7V1 743 aaKnown RBP12.41□□□□□ -0.42
CLPB-208ENST00000538021 FERMT3Q86UX7 667 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 EXOC8Q8IYI6 725 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 PIK3R5Q8WYR1 880 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 FAM3CQ92520 227 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 DNASE1L2Q92874 299 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 SLKQ9H2G2 1235 aaPredicted RBP12.41□□□□□ -0.42
CLPB-208ENST00000538021 DHX33Q9H6R0 707 aaKnown RBP12.41□□□□□ -0.42
CLPB-208ENST00000538021 GDE1Q9NZC3 331 aa12.41□□□□□ -0.42
CLPB-208ENST00000538021 CCDC196A0A1B0GTZ2 297 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 ASAP2O43150 1006 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 PRPF3O43395 683 aaKnown RBP12.4□□□□□ -0.42
CLPB-208ENST00000538021 PROS1P07225 676 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 OR1D2P34982 312 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 RFC5P40937 340 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 QARSP47897 775 aaKnown RBP12.4□□□□□ -0.42
CLPB-208ENST00000538021 SHC2P98077 582 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 FGD1P98174 961 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 SLC5A9Q2M3M2 681 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 UVSSAQ2YD98 709 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 HEATR6Q6AI08 1181 aaKnown RBP12.4□□□□□ -0.42
CLPB-208ENST00000538021 MAMSTRQ6ZN01 415 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 CEP68Q76N32 757 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 CDR2LQ86X02 465 aaPredicted RBP12.4□□□□□ -0.42
CLPB-208ENST00000538021 ZNF687Q8N1G0 1237 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 CCDC148Q8NFR7 591 aa12.4□□□□□ -0.42
CLPB-208ENST00000538021 TBCKQ8TEA7 893 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms