RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 MRPL10Q7Z7H8 261 aaKnown RBP12.59□□□□□ -0.39
SNHG1-206ENST00000537925 TMEM139Q8IV31 216 aa12.59□□□□□ -0.39
SNHG1-206ENST00000537925 CMTR2Q8IYT2 770 aaKnown RBP12.59□□□□□ -0.39
SNHG1-206ENST00000537925 IQUBQ8NA54 791 aa12.59□□□□□ -0.39
SNHG1-206ENST00000537925 ZNF397Q8NF99 534 aaPredicted RBP12.59□□□□□ -0.39
SNHG1-206ENST00000537925 DDX12PQ92771 950 aa12.59□□□□□ -0.39
SNHG1-206ENST00000537925 DNAJC19Q96DA6 116 aa12.59□□□□□ -0.39
SNHG1-206ENST00000537925 CPB2Q96IY4 423 aa12.59□□□□□ -0.39
SNHG1-206ENST00000537925 FAM161BQ96MY7 647 aa12.59□□□□□ -0.39
SNHG1-206ENST00000537925 PARVGQ9HBI0 331 aa12.59□□□□□ -0.39
SNHG1-206ENST00000537925 KBTBD4Q9NVX7 518 aa12.59□□□□□ -0.39
SNHG1-206ENST00000537925 TRMT1Q9NXH9 659 aaKnown RBP12.59□□□□□ -0.39
SNHG1-206ENST00000537925 NFE2L3Q9Y4A8 694 aa12.59□□□□□ -0.39
SNHG1-206ENST00000537925 PCDHB2Q9Y5E7 798 aa12.59□□□□□ -0.39
SNHG1-206ENST00000537925 SLC16A4O15374 487 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 FAM13AO94988 1023 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 LINC00271P0C7V0 271 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 PRR29P0C7W0 189 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 FGFR1P11362 822 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 IBSPP21815 317 aaPredicted RBP12.58□□□□□ -0.4
SNHG1-206ENST00000537925 SMTNP53814 917 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 NCKAP1LP55160 1127 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 ERVK-21P61565 698 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 PRPF4BQ13523 1007 aaKnown RBP12.58□□□□□ -0.4
SNHG1-206ENST00000537925 BTG3Q14201 252 aaPredicted RBP12.58□□□□□ -0.4
SNHG1-206ENST00000537925 GRIN2CQ14957 1233 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 SPATA1Q5VX52 437 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 ISM2Q6H9L7 571 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 SLC27A1Q6PCB7 646 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 DYMQ7RTS9 669 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 TAS1R3Q7RTX0 852 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 FIBCD1Q8N539 461 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 TMEM161BQ8NDZ6 487 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 ZNF592Q92610 1267 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 CLP1Q92989 425 aaKnown RBP12.58□□□□□ -0.4
SNHG1-206ENST00000537925 DHX58Q96C10 678 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 GUCD1Q96NT3 240 aa12.58□□□□□ -0.4
SNHG1-206ENST00000537925 TGS1Q96RS0 853 aaKnown RBP12.58□□□□□ -0.4
SNHG1-206ENST00000537925 EIF2AQ9BY44 585 aaKnown RBP12.58□□□□□ -0.4
SNHG1-206ENST00000537925 ANK1P16157 1881 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 REV3LO60673 3130 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 HOXA2O43364 376 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 TBCAO75347 108 aaKnown RBP12.57□□□□□ -0.4
SNHG1-206ENST00000537925 MAPTP10636 758 aaKnown RBP12.57□□□□□ -0.4
SNHG1-206ENST00000537925 DPYDQ12882 1025 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 CUL4BQ13620 913 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 NR1I3Q14994 352 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 CLLU1OSQ5K130 101 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 CDR2LQ86X02 465 aaPredicted RBP12.57□□□□□ -0.4
SNHG1-206ENST00000537925 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNHG1-206ENST00000537925 MYCT1Q8N699 235 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 RNF169Q8NCN4 708 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 SMG8Q8ND04 991 aaKnown RBP12.57□□□□□ -0.4
SNHG1-206ENST00000537925 PGBD4Q96DM1 585 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 PAGE5Q96GU1 130 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 SAMD11Q96NU1 681 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 CASD1Q96PB1 797 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 FIZ1Q96SL8 496 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 NAA15Q9BXJ9 866 aaKnown RBP12.57□□□□□ -0.4
SNHG1-206ENST00000537925 TMEM117Q9H0C3 514 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 MAGEF1Q9HAY2 307 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 OGFRQ9NZT2 677 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 USP20Q9Y2K6 914 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 PRRC2BQ5JSZ5 2229 aaKnown RBP12.57□□□□□ -0.4
SNHG1-206ENST00000537925 EYSQ5T1H1 3165 aa12.57□□□□□ -0.4
SNHG1-206ENST00000537925 ITIH6Q6UXX5 1313 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 FRMD3A2A2Y4 597 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 MEIS3P2A8K0S8 358 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 H0YCG3 227 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 N4BP3O15049 544 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 SCP2P22307 547 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 PAN2Q504Q3 1202 aaKnown RBP12.56□□□□□ -0.4
SNHG1-206ENST00000537925 CDKAL1Q5VV42 579 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 CNNM4Q6P4Q7 775 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 AGMOQ6ZNB7 445 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 HAUS6Q7Z4H7 955 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 REXO1L1PQ8IX06 675 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 RSPH1Q8WYR4 309 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 STAMQ92783 540 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 LPPQ93052 612 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 PANX2Q96RD6 677 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 CDX2Q99626 313 aaPredicted RBP12.56□□□□□ -0.4
SNHG1-206ENST00000537925 C17orf80Q9BSJ5 609 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 LRRC27Q9C0I9 530 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 PRDM12Q9H4Q4 367 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 PDZD7Q9H5P4 517 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 CERS4Q9HA82 394 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 SEL1LQ9UBV2 794 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 IPPQ9Y573 584 aa12.56□□□□□ -0.4
SNHG1-206ENST00000537925 MRPL42Q9Y6G3 142 aaKnown RBP12.56□□□□□ -0.4
SNHG1-206ENST00000537925 MYO7AQ13402 2215 aa12.55□□□□□ -0.4
SNHG1-206ENST00000537925 EPOPA6NHQ4 379 aa12.55□□□□□ -0.4
SNHG1-206ENST00000537925 TBKBP1A7MCY6 615 aa12.55□□□□□ -0.4
SNHG1-206ENST00000537925 NPTXRO95502 500 aa12.55□□□□□ -0.4
SNHG1-206ENST00000537925 MYL1P05976 194 aa12.55□□□□□ -0.4
SNHG1-206ENST00000537925 GAP43P17677 238 aa12.55□□□□□ -0.4
SNHG1-206ENST00000537925 CDK11BP21127 795 aaKnown RBP12.55□□□□□ -0.4
SNHG1-206ENST00000537925 FECHP22830 423 aa12.55□□□□□ -0.4
SNHG1-206ENST00000537925 AMPD3Q01432 767 aa12.55□□□□□ -0.4
SNHG1-206ENST00000537925 EPC2Q52LR7 807 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms