RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 FTLP02792 175 aaPredicted RBP14.61□□□□□ -0.07
SMG6-203ENST00000536871 EPHX2P34913 555 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 TCF7P36402 384 aaPredicted RBP14.61□□□□□ -0.07
SMG6-203ENST00000536871 MATR3P43243 847 aaKnown RBP eCLIP14.61□□□□□ -0.07
SMG6-203ENST00000536871 SNAPC2Q13487 334 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 ZACNQ401N2 412 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 MAATS1Q7Z4T9 603 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 ZBTB8OSQ8IWT0 167 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 METTL13Q8N6R0 699 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 CCDC26Q8TAB7 109 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 KREMEN1Q96MU8 473 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 GTF3C4Q9UKN8 822 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 SLC45A1Q9Y2W3 748 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 KIAA1217Q5T5P2 1943 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 GOLGA6L10A0A0M3HER8 536 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 BUB1BO60566 1050 aaPredicted RBP14.61□□□□□ -0.07
SMG6-203ENST00000536871 MYBL1P10243 752 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 DLATP10515 647 aaKnown RBP14.61□□□□□ -0.07
SMG6-203ENST00000536871 CYP11B1P15538 503 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 TBXAS1P24557 533 aaPredicted RBP14.61□□□□□ -0.07
SMG6-203ENST00000536871 USP8P40818 1118 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 CUL1Q13616 776 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 CELF3Q5SZQ8 465 aaKnown RBP14.61□□□□□ -0.07
SMG6-203ENST00000536871 ALS2CLQ60I27 953 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 TAS1R2Q8TE23 839 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 WHAMMQ8TF30 809 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 ATP8B4Q8TF62 1192 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 SEMA4DQ92854 862 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 MS4A14Q96JA4 679 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 MRPL4Q9BYD3 311 aaKnown RBP14.61□□□□□ -0.07
SMG6-203ENST00000536871 PDE11AQ9HCR9 933 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 PSD3Q9NYI0 1048 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 CTTNBP2NLQ9P2B4 639 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 A0A0B4J269 797 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 ASAP2O43150 1006 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 POTEJP0CG39 1038 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 ABCB4P21439 1286 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 TFDP1Q14186 410 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 TRIM72Q6ZMU5 477 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 PNMA8AQ86V59 439 aaPredicted RBP14.6□□□□□ -0.07
SMG6-203ENST00000536871 ASAP3Q8TDY4 903 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 CNKSR2Q8WXI2 1034 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 TMEM143Q96AN5 459 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 OPTNQ96CV9 577 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 PCYT2Q99447 389 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 CGRRF1Q99675 332 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 MSTO1Q9BUK6 570 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 THAP2Q9H0W7 228 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 SMARCAD1Q9H4L7 1026 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 RBPJLQ9UBG7 517 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 DMGDHQ9UI17 866 aaKnown RBP14.6□□□□□ -0.07
SMG6-203ENST00000536871 HPCAL4Q9UM19 191 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 PCDHB2Q9Y5E7 798 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 OTOFQ9HC10 1997 aa14.6□□□□□ -0.07
SMG6-203ENST00000536871 TNNI1P19237 187 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 SOX10P56693 466 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 TTLL4Q14679 1199 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 LDLRAD1Q5T700 205 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 CDCA2Q69YH5 1023 aaPredicted RBP14.59□□□□□ -0.07
SMG6-203ENST00000536871 ZSWIM2Q8NEG5 633 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 GLG1Q92896 1179 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 CCDC102AQ96A19 550 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 EXOC4Q96A65 974 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 RUNDC3BQ96NL0 473 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 GPR20Q99678 358 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 PLVAPQ9BX97 442 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 IMPG2Q9BZV3 1241 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 WNT8AQ9H1J5 351 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 RBAKQ9NYW8 714 aaPredicted RBP14.59□□□□□ -0.07
SMG6-203ENST00000536871 PACSIN2Q9UNF0 486 aaPredicted RBP14.59□□□□□ -0.07
SMG6-203ENST00000536871 NOC2LQ9Y3T9 749 aaKnown RBP14.59□□□□□ -0.07
SMG6-203ENST00000536871 LCTP09848 1927 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 IGKV6-21A0A0C4DH24 114 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 CYP26A1O43174 497 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 OPA1O60313 960 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 TOM1L1O75674 476 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 HEXIM1O94992 359 aaKnown RBP14.59□□□□□ -0.07
SMG6-203ENST00000536871 SGPL1O95470 568 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 C4BPAP04003 597 aaKnown RBP14.59□□□□□ -0.07
SMG6-203ENST00000536871 CYP1A2P05177 515 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 ZBTB48P10074 688 aaPredicted RBP14.59□□□□□ -0.07
SMG6-203ENST00000536871 NOP9Q86U38 636 aaKnown RBP14.59□□□□□ -0.07
SMG6-203ENST00000536871 DHX37Q8IY37 1157 aaKnown RBP14.59□□□□□ -0.07
SMG6-203ENST00000536871 SLC20A1Q8WUM9 679 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 KRT12Q99456 494 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 SYT17Q9BSW7 474 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 YY1AP1Q9H869 796 aa14.59□□□□□ -0.07
SMG6-203ENST00000536871 MYH10P35580 1976 aa14.58□□□□□ -0.07
SMG6-203ENST00000536871 KRIT1O00522 736 aa14.58□□□□□ -0.08
SMG6-203ENST00000536871 CLDN3O15551 220 aa14.58□□□□□ -0.08
SMG6-203ENST00000536871 HBP1O60381 514 aa14.58□□□□□ -0.08
SMG6-203ENST00000536871 PIK3CAP42336 1068 aa14.58□□□□□ -0.08
SMG6-203ENST00000536871 FMO1Q01740 532 aa14.58□□□□□ -0.08
SMG6-203ENST00000536871 POU5F1Q01860 360 aaKnown RBP14.58□□□□□ -0.08
SMG6-203ENST00000536871 MOGSQ13724 837 aa14.58□□□□□ -0.08
SMG6-203ENST00000536871 ACAD10Q6JQN1 1059 aa14.58□□□□□ -0.08
SMG6-203ENST00000536871 ABRAQ8N0Z2 381 aa14.58□□□□□ -0.08
SMG6-203ENST00000536871 MREGQ8N565 214 aa14.58□□□□□ -0.08
SMG6-203ENST00000536871 ZNF526Q8TF50 670 aaPredicted RBP14.58□□□□□ -0.08
SMG6-203ENST00000536871 CLMNQ96JQ2 1002 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms