RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 PALB2Q86YC2 1186 aa21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 TMEM105Q8N8V8 129 aa21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 RIN2Q8WYP3 895 aaPredicted RBP21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 RABGGTAQ92696 567 aa21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 PLEKHA4Q9H4M7 779 aa21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 KCNK12Q9HB15 430 aa21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 WDR6Q9NNW5 1121 aaKnown RBP21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 FNIP2Q9P278 1114 aa21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 IGSF9Q9P2J2 1179 aa21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 H0Y858 1186 aa21.74■■□□□ 1.07
TNFRSF1B-204ENST00000536782 RFPL2O75678 378 aa21.74■■□□□ 1.07
TNFRSF1B-204ENST00000536782 CYP11B2P19099 503 aa21.74■■□□□ 1.07
TNFRSF1B-204ENST00000536782 GBP2P32456 591 aaPredicted RBP21.74■■□□□ 1.07
TNFRSF1B-204ENST00000536782 TUSC3Q13454 348 aa21.74■■□□□ 1.07
TNFRSF1B-204ENST00000536782 PRPF4BQ13523 1007 aaKnown RBP21.74■■□□□ 1.07
TNFRSF1B-204ENST00000536782 HSP90AA2PQ14568 343 aaPredicted RBP21.74■■□□□ 1.07
TNFRSF1B-204ENST00000536782 MAPK6Q16659 721 aa21.74■■□□□ 1.07
TNFRSF1B-204ENST00000536782 HAUS3Q68CZ6 603 aa21.74■■□□□ 1.07
TNFRSF1B-204ENST00000536782 BSNDQ8WZ55 320 aa21.74■■□□□ 1.07
TNFRSF1B-204ENST00000536782 SMG7Q92540 1137 aaKnown RBP21.74■■□□□ 1.07
TNFRSF1B-204ENST00000536782 PDZD7Q9H5P4 517 aa21.74■■□□□ 1.07
TNFRSF1B-204ENST00000536782 TTLL13PA6NNM8 815 aa21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 TGM5O43548 720 aa21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 PRKCBP05771 671 aa21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 MUTP22033 750 aa21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 NAMPTP43490 491 aa21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 RBM25P49756 843 aaKnown RBP21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 GNL2Q13823 731 aaKnown RBP21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 PPP2R5AQ15172 486 aa21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 TTC38Q5R3I4 469 aa21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 GLYCTKQ8IVS8 523 aa21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 FBXO18Q8NFZ0 1043 aa21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 DEPTORQ8TB45 409 aa21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 ADPGKQ9BRR6 497 aa21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 PIDD1Q9HB75 910 aa21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 SNTG2Q9NY99 539 aa21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 DUSP12Q9UNI6 340 aa21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 CLUHO75153 1309 aa21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 SF3B1O75533 1304 aaKnown RBP eCLIP21.73■■□□□ 1.07
TNFRSF1B-204ENST00000536782 ACKR2O00590 384 aa21.72■■□□□ 1.07
TNFRSF1B-204ENST00000536782 N4BP1O75113 896 aaKnown RBP21.72■■□□□ 1.07
TNFRSF1B-204ENST00000536782 LIG1P18858 919 aa21.72■■□□□ 1.07
TNFRSF1B-204ENST00000536782 CLCN5P51795 746 aa21.72■■□□□ 1.07
TNFRSF1B-204ENST00000536782 HMGN5P82970 282 aaKnown RBP21.72■■□□□ 1.07
TNFRSF1B-204ENST00000536782 NOSTRINQ8IVI9 506 aa21.72■■□□□ 1.07
TNFRSF1B-204ENST00000536782 ZNF707Q96C28 371 aaPredicted RBP21.72■■□□□ 1.07
TNFRSF1B-204ENST00000536782 PAAF1Q9BRP4 392 aa21.72■■□□□ 1.07
TNFRSF1B-204ENST00000536782 CCDC113Q9H0I3 377 aa21.72■■□□□ 1.07
TNFRSF1B-204ENST00000536782 NT5C3AQ9H0P0 336 aa21.72■■□□□ 1.07
TNFRSF1B-204ENST00000536782 ZDHHC7Q9NXF8 308 aa21.72■■□□□ 1.07
TNFRSF1B-204ENST00000536782 CACNG4Q9UBN1 327 aa21.72■■□□□ 1.07
TNFRSF1B-204ENST00000536782 CASTOR2A6NHX0 329 aa21.71■■□□□ 1.07
TNFRSF1B-204ENST00000536782 PAPLNO95428 1278 aa21.71■■□□□ 1.07
TNFRSF1B-204ENST00000536782 THP07101 528 aa21.71■■□□□ 1.07
TNFRSF1B-204ENST00000536782 RPL17P18621 184 aaKnown RBP21.71■■□□□ 1.07
TNFRSF1B-204ENST00000536782 CCT6AP40227 531 aaKnown RBP21.71■■□□□ 1.07
TNFRSF1B-204ENST00000536782 TRAPPC10P48553 1259 aa21.71■■□□□ 1.07
TNFRSF1B-204ENST00000536782 LILRA6Q6PI73 481 aa21.71■■□□□ 1.07
TNFRSF1B-204ENST00000536782 FAM184AQ8NB25 1140 aa21.71■■□□□ 1.07
TNFRSF1B-204ENST00000536782 FLCNQ8NFG4 579 aa21.71■■□□□ 1.07
TNFRSF1B-204ENST00000536782 ZSCAN31Q96LW9 406 aaPredicted RBP21.71■■□□□ 1.07
TNFRSF1B-204ENST00000536782 FBXL21Q9UKT6 434 aa21.71■■□□□ 1.07
TNFRSF1B-204ENST00000536782 NOL7Q9UMY1 257 aaKnown RBP21.71■■□□□ 1.07
TNFRSF1B-204ENST00000536782 PTGESO14684 152 aa21.7■■□□□ 1.06
TNFRSF1B-204ENST00000536782 RECQL4O94761 1208 aa21.7■■□□□ 1.06
TNFRSF1B-204ENST00000536782 FXR2P51116 673 aaKnown RBP eCLIP21.7■■□□□ 1.06
TNFRSF1B-204ENST00000536782 RTP2Q5QGT7 225 aa21.7■■□□□ 1.06
TNFRSF1B-204ENST00000536782 PRSS55Q6UWB4 352 aaPredicted RBP21.7■■□□□ 1.06
TNFRSF1B-204ENST00000536782 HASPINQ8TF76 798 aa21.7■■□□□ 1.06
TNFRSF1B-204ENST00000536782 IFT74Q96LB3 600 aa21.7■■□□□ 1.06
TNFRSF1B-204ENST00000536782 TTPALQ9BTX7 342 aa21.7■■□□□ 1.06
TNFRSF1B-204ENST00000536782 PRKD2Q9BZL6 878 aa21.7■■□□□ 1.06
TNFRSF1B-204ENST00000536782 EPS15L1Q9UBC2 864 aa21.7■■□□□ 1.06
TNFRSF1B-204ENST00000536782 DAXXQ9UER7 740 aaPredicted RBP21.7■■□□□ 1.06
TNFRSF1B-204ENST00000536782 LRWD1Q9UFC0 647 aa21.7■■□□□ 1.06
TNFRSF1B-204ENST00000536782 USP20Q9Y2K6 914 aa21.7■■□□□ 1.06
TNFRSF1B-204ENST00000536782 GVINP1Q7Z2Y8 2422 aa21.7■■□□□ 1.06
TNFRSF1B-204ENST00000536782 ST18O60284 1047 aa21.69■■□□□ 1.06
TNFRSF1B-204ENST00000536782 GFRA3O60609 400 aa21.69■■□□□ 1.06
TNFRSF1B-204ENST00000536782 KIF4AO95239 1232 aa21.69■■□□□ 1.06
TNFRSF1B-204ENST00000536782 EFNA5P52803 228 aa21.69■■□□□ 1.06
TNFRSF1B-204ENST00000536782 FAM171A1Q5VUB5 890 aa21.69■■□□□ 1.06
TNFRSF1B-204ENST00000536782 CEP57Q86XR8 500 aa21.69■■□□□ 1.06
TNFRSF1B-204ENST00000536782 KIFAP3Q92845 792 aa21.69■■□□□ 1.06
TNFRSF1B-204ENST00000536782 MYADMQ96S97 322 aa21.69■■□□□ 1.06
TNFRSF1B-204ENST00000536782 BHMT2Q9H2M3 363 aa21.69■■□□□ 1.06
TNFRSF1B-204ENST00000536782 SH2B1Q9NRF2 756 aaPredicted RBP21.69■■□□□ 1.06
TNFRSF1B-204ENST00000536782 ZMYND10O75800 440 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 EDN1P05305 212 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 ELAVL2Q12926 359 aaKnown RBP21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 NAB2Q15742 525 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 ECM1Q16610 540 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 DCAF4L1Q3SXM0 396 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 EEF1DP3Q658K8 133 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 CWF19L1Q69YN2 538 aaKnown RBP21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 SIX5Q8N196 739 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 C4orf32Q8N8J7 132 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 RSAD2Q8WXG1 361 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 PIK3R5Q8WYR1 880 aa21.68■■□□□ 1.06
TNFRSF1B-204ENST00000536782 NXPE3Q969Y0 559 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms