RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 CLTAP09496 248 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 TMEM253P0C7T8 217 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 XRCC5P13010 732 aaKnown RBP8.36□□□□□ -1.07
CPSF7-216ENST00000536548 RPL13P26373 211 aaKnown RBP8.36□□□□□ -1.07
CPSF7-216ENST00000536548 HIBADHP31937 336 aaKnown RBP8.36□□□□□ -1.07
CPSF7-216ENST00000536548 CHRNA3P32297 505 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 STAT1P42224 750 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 ATP11AP98196 1134 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 POU5F1Q01860 360 aaKnown RBP8.36□□□□□ -1.07
CPSF7-216ENST00000536548 KCNH2Q12809 1159 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 MYO1EQ12965 1108 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 LRRC41Q15345 812 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 EXOC3L4Q17RC7 722 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 DUPD1Q68J44 220 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 ZNF571Q7Z3V5 609 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-216ENST00000536548 IRF2BP2Q7Z5L9 587 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 DAAM2Q86T65 1068 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 LRRC34Q8IZ02 419 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 NSMCE1Q8WV22 266 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 RFFLQ8WZ73 363 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 VTI1AQ96AJ9 217 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 DNAJC19Q96DA6 116 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 RAB3IPQ96QF0 476 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-216ENST00000536548 NUDT12Q9BQG2 462 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 TMEM47Q9BQJ4 181 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 PBX4Q9BYU1 374 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 GOPCQ9HD26 462 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 IL17RBQ9NRM6 502 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 SPATS2LQ9NUQ6 558 aaKnown RBP8.36□□□□□ -1.07
CPSF7-216ENST00000536548 ARMCX3Q9UH62 379 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-216ENST00000536548 USP15Q9Y4E8 981 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-216ENST00000536548 GBF1Q92538 1859 aa8.36□□□□□ -1.07
CPSF7-216ENST00000536548 DOCK1Q14185 1865 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 GTPBP10A4D1E9 387 aaKnown RBP8.35□□□□□ -1.07
CPSF7-216ENST00000536548 ABLIM1O14639 778 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 OPLAHO14841 1288 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 NKRFO15226 690 aaKnown RBP eCLIP8.35□□□□□ -1.07
CPSF7-216ENST00000536548 PHF2O75151 1096 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 CAND2O75155 1236 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 ATP5HO75947 161 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 ANP32DO95626 131 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 MYCNP04198 464 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-216ENST00000536548 KRT18P05783 430 aaKnown RBP8.35□□□□□ -1.07
CPSF7-216ENST00000536548 RPSAP08865 295 aaKnown RBP8.35□□□□□ -1.07
CPSF7-216ENST00000536548 UCHL3P15374 230 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 PAX7P23759 505 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 CNGA1P29973 690 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 GCKP35557 465 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 SKIV2L2P42285 1042 aaKnown RBP8.35□□□□□ -1.07
CPSF7-216ENST00000536548 GCLCP48506 637 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-216ENST00000536548 SARNPP82979 210 aaKnown RBP8.35□□□□□ -1.07
CPSF7-216ENST00000536548 GRIK3Q13003 919 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 ADAM9Q13443 819 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 ENOX2Q16206 610 aaKnown RBP8.35□□□□□ -1.07
CPSF7-216ENST00000536548 SPRED3Q2MJR0 410 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 KIAA1755Q5JYT7 1200 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 MFSD5Q6N075 450 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 TBC1D1Q86TI0 1168 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-216ENST00000536548 GPIHBP1Q8IV16 184 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 NEDD1Q8NHV4 660 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 MORC4Q8TE76 937 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 ATP8B4Q8TF62 1192 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 DYDC1Q8WWB3 177 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 CTNNBL1Q8WYA6 563 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-216ENST00000536548 USP6NLQ92738 828 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 GRAMD1AQ96CP6 724 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 TBC1D31Q96DN5 1066 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 STAMBPL1Q96FJ0 436 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 PHOX2BQ99453 314 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 SH3GL3Q99963 347 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 ELAC2Q9BQ52 826 aaKnown RBP8.35□□□□□ -1.07
CPSF7-216ENST00000536548 GLT8D2Q9H1C3 349 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 ASCC2Q9H1I8 757 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-216ENST00000536548 AZI2Q9H6S1 392 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 CD320Q9NPF0 282 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 EMILIN3Q9NT22 766 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 ZDHHC18Q9NUE0 388 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 FLRT1Q9NZU1 646 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 FAM198AQ9UFP1 575 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 PNMA3Q9UL41 463 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 CORO1CQ9ULV4 474 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-216ENST00000536548 STX8Q9UNK0 236 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 TRAF3IP3Q9Y228 551 aa8.35□□□□□ -1.07
CPSF7-216ENST00000536548 LRRC37A2A6NM11 1700 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 DNAH14Q0VDD8 3507 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 SPDYE3A6NKU9 549 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 E7ENQ6 273 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 PDXKO00764 312 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 SNX3O60493 162 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 OAS1P00973 400 aaKnown RBP8.34□□□□□ -1.07
CPSF7-216ENST00000536548 FGGP02679 453 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 PLA2G4BP0C869 781 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 ITGA4P13612 1032 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 IBSPP21815 317 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-216ENST00000536548 NR2F2P24468 414 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 FLT3P36888 993 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 CCNG1P51959 295 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 HADHBP55084 474 aaKnown RBP8.34□□□□□ -1.07
CPSF7-216ENST00000536548 PPP4CP60510 307 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 COPS2P61201 443 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms