RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 TMEM253P0C7T8 217 aa24.5■■□□□ 1.51
HMGA2-206ENST00000536545 TNFAIP3P21580 790 aa24.5■■□□□ 1.51
HMGA2-206ENST00000536545 PRPF4BQ13523 1007 aaKnown RBP24.5■■□□□ 1.51
HMGA2-206ENST00000536545 CST9Q5W186 159 aa24.5■■□□□ 1.51
HMGA2-206ENST00000536545 ZBTB8OSQ8IWT0 167 aa24.5■■□□□ 1.51
HMGA2-206ENST00000536545 RNF149Q8NC42 400 aa24.5■■□□□ 1.51
HMGA2-206ENST00000536545 EPS8L1Q8TE68 723 aa24.5■■□□□ 1.51
HMGA2-206ENST00000536545 FNBP1Q96RU3 617 aa24.5■■□□□ 1.51
HMGA2-206ENST00000536545 PDE11AQ9HCR9 933 aa24.5■■□□□ 1.51
HMGA2-206ENST00000536545 RAB21Q9UL25 225 aa24.5■■□□□ 1.51
HMGA2-206ENST00000536545 ZSWIM8A7E2V4 1837 aa24.5■■□□□ 1.51
HMGA2-206ENST00000536545 FAM189A1O60320 539 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 C22orf31O95567 290 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 ADCYAP1R1P41586 468 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 TDRD10Q5VZ19 366 aaKnown RBP24.49■■□□□ 1.51
HMGA2-206ENST00000536545 PLEKHH3Q7Z736 793 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 TPCN2Q8NHX9 752 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 MAML3Q96JK9 1138 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 PNKPQ96T60 521 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 CGRRF1Q99675 332 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 TAS2R14Q9NYV8 317 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 CNTNAP2Q9UHC6 1331 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 TULP1O00294 542 aaPredicted RBP24.49■■□□□ 1.51
HMGA2-206ENST00000536545 TOM1L1O75674 476 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 C4BPAP04003 597 aaKnown RBP24.49■■□□□ 1.51
HMGA2-206ENST00000536545 PRKCBP05771 671 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 SRGAP2CP0DJJ0 459 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 MAPK4P31152 587 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 MATR3P43243 847 aaKnown RBP eCLIP24.49■■□□□ 1.511e-6■■■□□ 16.6
HMGA2-206ENST00000536545 GCNT1Q02742 428 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 ITIH3Q06033 890 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 LMBRD2Q68DH5 695 aaPredicted RBP24.49■■□□□ 1.51
HMGA2-206ENST00000536545 RNPEPQ9H4A4 650 aa24.49■■□□□ 1.51
HMGA2-206ENST00000536545 ABLIM1O14639 778 aa24.48■■□□□ 1.51
HMGA2-206ENST00000536545 ZNF484Q5JVG2 852 aa24.48■■□□□ 1.51
HMGA2-206ENST00000536545 ENOSF1Q7L5Y1 443 aa24.48■■□□□ 1.51
HMGA2-206ENST00000536545 NOP9Q86U38 636 aaKnown RBP24.48■■□□□ 1.51
HMGA2-206ENST00000536545 AFG1LQ8WV93 481 aa24.48■■□□□ 1.51
HMGA2-206ENST00000536545 RFFLQ8WZ73 363 aa24.48■■□□□ 1.51
HMGA2-206ENST00000536545 ACO2Q99798 780 aaKnown RBP24.48■■□□□ 1.51
HMGA2-206ENST00000536545 ZRANB2O95218 330 aaKnown RBP eCLIP24.47■■□□□ 1.51
HMGA2-206ENST00000536545 SGPL1O95470 568 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 HLA-DRAP01903 254 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 RHOXF2BP0C7M4 288 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 CHRNB2P17787 502 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 TFDP1Q14186 410 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 MAPK6Q16659 721 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 TMCO3Q6UWJ1 677 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 DPP9Q86TI2 863 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 RHPN2Q8IUC4 686 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 BRSK2Q8IWQ3 736 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 RPUSD2Q8IZ73 545 aaKnown RBP24.47■■□□□ 1.51
HMGA2-206ENST00000536545 TATDN2Q93075 761 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 PSMB7Q99436 277 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 RHOXF2Q9BQY4 288 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 PI4K2AQ9BTU6 479 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 C1orf112Q9NSG2 853 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 SEPT11Q9NVA2 429 aaKnown RBP24.47■■□□□ 1.51
HMGA2-206ENST00000536545 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.47■■□□□ 1.51
HMGA2-206ENST00000536545 CCDC151A5D8V7 595 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 TMCO5BA8MYB1 307 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 CLDN3O15551 220 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 CYP26A1O43174 497 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 TNNI1P19237 187 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 CXCR5P32302 372 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 USP8P40818 1118 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 NOP2P46087 812 aaKnown RBP24.47■■□□□ 1.51
HMGA2-206ENST00000536545 CLCN3P51790 818 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 BRD3Q15059 726 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 SLFN11Q7Z7L1 901 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 LINC01465Q8N7H1 131 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 ZBTB10Q96DT7 871 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 FAM81BQ96LP2 452 aa24.47■■□□□ 1.51
HMGA2-206ENST00000536545 TRPM7Q96QT4 1865 aa24.46■■□□□ 1.51
HMGA2-206ENST00000536545 VNN1O95497 513 aa24.46■■□□□ 1.51
HMGA2-206ENST00000536545 GJB1P08034 283 aa24.46■■□□□ 1.51
HMGA2-206ENST00000536545 HARSP12081 509 aaKnown RBP24.46■■□□□ 1.51
HMGA2-206ENST00000536545 PIK3CAP42336 1068 aa24.46■■□□□ 1.51
HMGA2-206ENST00000536545 MCL1Q07820 350 aa24.46■■□□□ 1.51
HMGA2-206ENST00000536545 EFCAB12Q6NXP0 572 aa24.46■■□□□ 1.51
HMGA2-206ENST00000536545 CC2D1AQ6P1N0 951 aaPredicted RBP24.46■■□□□ 1.51
HMGA2-206ENST00000536545 SLC47A2Q86VL8 602 aa24.46■■□□□ 1.51
HMGA2-206ENST00000536545 CTNNBL1Q8WYA6 563 aaPredicted RBP24.46■■□□□ 1.51
HMGA2-206ENST00000536545 ELMO3Q96BJ8 720 aa24.46■■□□□ 1.51
HMGA2-206ENST00000536545 COL1A2P08123 1366 aa24.45■■□□□ 1.5
HMGA2-206ENST00000536545 SLC15A5A6NIM6 579 aa24.45■■□□□ 1.5
HMGA2-206ENST00000536545 ZNF286BP0CG31 522 aa24.45■■□□□ 1.5
HMGA2-206ENST00000536545 HOXD8P13378 290 aaPredicted RBP24.45■■□□□ 1.5
HMGA2-206ENST00000536545 INSRRP14616 1297 aa24.45■■□□□ 1.5
HMGA2-206ENST00000536545 PROZP22891 400 aa24.45■■□□□ 1.5
HMGA2-206ENST00000536545 HUNKP57058 714 aa24.45■■□□□ 1.5
HMGA2-206ENST00000536545 C2orf54Q08AI8 447 aa24.45■■□□□ 1.5
HMGA2-206ENST00000536545 RASAL3Q86YV0 1011 aa24.45■■□□□ 1.5
HMGA2-206ENST00000536545 DHX38Q92620 1227 aaKnown RBP24.45■■□□□ 1.5
HMGA2-206ENST00000536545 NLRP4Q96MN2 994 aa24.45■■□□□ 1.5
HMGA2-206ENST00000536545 ARID3AQ99856 593 aa24.45■■□□□ 1.5
HMGA2-206ENST00000536545 TINF2Q9BSI4 451 aa24.45■■□□□ 1.5
HMGA2-206ENST00000536545 ISCUQ9H1K1 167 aa24.45■■□□□ 1.5
HMGA2-206ENST00000536545 FZD8Q9H461 694 aa24.45■■□□□ 1.5
HMGA2-206ENST00000536545 PACSIN2Q9UNF0 486 aaPredicted RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms