RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CLCN5P51795 746 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 TDGQ13569 410 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 PPP2R5AQ15172 486 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 C15orf39Q6ZRI6 1047 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 C1orf186Q6ZWK4 172 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 ASCL5Q7RTU5 278 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 KCNN1Q92952 543 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 GAD1Q99259 594 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 NTPCRQ9BSD7 190 aaKnown RBP13.74□□□□□ -0.21
PRKDC-207ENST00000536483 TIPINQ9BVW5 301 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 EIF2AQ9BY44 585 aaKnown RBP13.74□□□□□ -0.21
PRKDC-207ENST00000536483 CCDC113Q9H0I3 377 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 NT5C3AQ9H0P0 336 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 C2orf40Q9H1Z8 148 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 C17orf75Q9HAS0 396 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 KCNK12Q9HB15 430 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 PRMT7Q9NVM4 692 aaPredicted RBP13.74□□□□□ -0.21
PRKDC-207ENST00000536483 IPPQ9Y573 584 aa13.74□□□□□ -0.21
PRKDC-207ENST00000536483 PP2D1A8MPX8 630 aa13.73□□□□□ -0.21
PRKDC-207ENST00000536483 PDIA4P13667 645 aaKnown RBP13.73□□□□□ -0.21
PRKDC-207ENST00000536483 EFNA5P52803 228 aa13.73□□□□□ -0.21
PRKDC-207ENST00000536483 CWF19L1Q69YN2 538 aaKnown RBP13.73□□□□□ -0.21
PRKDC-207ENST00000536483 COLGALT2Q8IYK4 626 aa13.73□□□□□ -0.21
PRKDC-207ENST00000536483 DAW1Q8N136 415 aa13.73□□□□□ -0.21
PRKDC-207ENST00000536483 BSNDQ8WZ55 320 aa13.73□□□□□ -0.21
PRKDC-207ENST00000536483 CPB2Q96IY4 423 aa13.73□□□□□ -0.21
PRKDC-207ENST00000536483 PNMA5Q96PV4 448 aa13.73□□□□□ -0.21
PRKDC-207ENST00000536483 RPS6KC1Q96S38 1066 aa13.73□□□□□ -0.21
PRKDC-207ENST00000536483 HERC2P3Q9BVR0 1158 aa13.73□□□□□ -0.21
PRKDC-207ENST00000536483 MAN1C1Q9NR34 630 aa13.73□□□□□ -0.21
PRKDC-207ENST00000536483 MIOSQ9NXC5 875 aa13.73□□□□□ -0.21
PRKDC-207ENST00000536483 KCND2Q9NZV8 630 aa13.73□□□□□ -0.21
PRKDC-207ENST00000536483 HES2Q9Y543 173 aa13.73□□□□□ -0.21
PRKDC-207ENST00000536483 PLXNA3P51805 1871 aa13.73□□□□□ -0.21
PRKDC-207ENST00000536483 RIF1Q5UIP0 2472 aaKnown RBP13.73□□□□□ -0.21
PRKDC-207ENST00000536483 DENND4AQ7Z401 1863 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 CCDC195A0A1B0GUA6 201 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 ARL5CA6NH57 179 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 E9PMD0 336 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 F8W810 466 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 ACKR2O00590 384 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 TEX28O15482 410 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 PI15O43692 258 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 NPR3P17342 541 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 GUCY2CP25092 1073 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 CDC25AP30304 524 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 LONP1P36776 959 aaKnown RBP13.72□□□□□ -0.21
PRKDC-207ENST00000536483 MLH1P40692 756 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 NBL1P41271 181 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 RESTQ13127 1097 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 PTPAQ15257 358 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 TMEM119Q4V9L6 283 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 RINT1Q6NUQ1 792 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 SLC27A1Q6PCB7 646 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 KCNK18Q7Z418 384 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 ZBTB8OSQ8IWT0 167 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 SYT2Q8N9I0 419 aaPredicted RBP13.72□□□□□ -0.21
PRKDC-207ENST00000536483 CMASQ8NFW8 434 aaPredicted RBP13.72□□□□□ -0.21
PRKDC-207ENST00000536483 SNX27Q96L92 541 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 ZFP42Q96MM3 310 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 APOL6Q9BWW8 343 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 KCNG1Q9UIX4 513 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 DUSP12Q9UNI6 340 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 SSX2IPQ9Y2D8 614 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 GIT1Q9Y2X7 761 aa13.72□□□□□ -0.21
PRKDC-207ENST00000536483 PHLPP2Q6ZVD8 1323 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 VWA3AA6NCI4 1184 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 PRR23AA6NEV1 266 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 LRRIQ4A6NIV6 560 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 NARSO43776 548 aaKnown RBP13.71□□□□□ -0.21
PRKDC-207ENST00000536483 N4BP1O75113 896 aaKnown RBP13.71□□□□□ -0.21
PRKDC-207ENST00000536483 RFPL2O75678 378 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 EFEMP2O95967 443 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 GLUD1P00367 558 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 ADH1AP07327 375 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 GLUD2P49448 558 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 SCNN1GP51170 649 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 DSC1Q08554 894 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 MAPK7Q13164 816 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 MAPK6Q16659 721 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 KIAA0319Q5VV43 1072 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 FRMD5Q7Z6J6 570 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 RNF168Q8IYW5 571 aaPredicted RBP13.71□□□□□ -0.21
PRKDC-207ENST00000536483 RSAD2Q8WXG1 361 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 IFT74Q96LB3 600 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 ZSCAN16Q9H4T2 348 aaPredicted RBP13.71□□□□□ -0.21
PRKDC-207ENST00000536483 RXFP1Q9HBX9 757 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 ARHGAP28Q9P2N2 729 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 FBXL21Q9UKT6 434 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 MTMR6Q9Y217 621 aa13.71□□□□□ -0.21
PRKDC-207ENST00000536483 C2orf16Q68DN1 1984 aa13.71□□□□□ -0.22
PRKDC-207ENST00000536483 FAM186AA6NE01 2351 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 B4GALT5O43286 388 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 SPATA31D3P0C874 917 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 AOC1P19801 751 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 GBP2P32456 591 aaPredicted RBP13.7□□□□□ -0.22
PRKDC-207ENST00000536483 SLC12A3P55017 1021 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 DSG1Q02413 1049 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 SF3A1Q15459 793 aaKnown RBP13.7□□□□□ -0.22
PRKDC-207ENST00000536483 SPATA31D4Q6ZUB0 917 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms