RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 CDK5RAP3Q96JB5 506 aa15.73■□□□□ 0.11
RTN3P1-201ENST00000536295 PNMA5Q96PV4 448 aa15.73■□□□□ 0.11
RTN3P1-201ENST00000536295 GPR62Q9BZJ7 368 aa15.73■□□□□ 0.11
RTN3P1-201ENST00000536295 SFXN1Q9H9B4 322 aa15.73■□□□□ 0.11
RTN3P1-201ENST00000536295 ADAM28Q9UKQ2 775 aa15.73■□□□□ 0.11
RTN3P1-201ENST00000536295 NR2E1Q9Y466 385 aa15.73■□□□□ 0.11
RTN3P1-201ENST00000536295 ZMYM2Q9UBW7 1377 aa15.73■□□□□ 0.11
RTN3P1-201ENST00000536295 PHLPP2Q6ZVD8 1323 aa15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 C2CD4DB7Z1M9 353 aa15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 EFEMP2O95967 443 aa15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 THP07101 528 aa15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 ADH1AP07327 375 aa15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 ZXDAP98168 799 aa15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 DSG1Q02413 1049 aa15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 TUSC3Q13454 348 aa15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 HSP90AA2PQ14568 343 aaPredicted RBP15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 KIAA0319Q5VV43 1072 aa15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 C1orf186Q6ZWK4 172 aa15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 GLYCTKQ8IVS8 523 aa15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 FAM122AQ96E09 287 aa15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 DRC1Q96MC2 740 aa15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 KMT5AQ9NQR1 393 aa15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 MAN1C1Q9NR34 630 aa15.72■□□□□ 0.11
RTN3P1-201ENST00000536295 VPS37CA5D8V6 355 aaPredicted RBP15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 TMEM221A6NGB7 291 aa15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 M0R296 226 aa15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 KIF4AO95239 1232 aa15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 SPATA31D3P0C874 917 aa15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 PLA2G5P39877 138 aa15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 MAPK7Q13164 816 aa15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 PTPN21Q16825 1174 aa15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 USP41Q3LFD5 358 aa15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 GLRA4Q5JXX5 417 aa15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 ARL6IP4Q66PJ3 421 aaKnown RBP15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 TRIM67Q6ZTA4 783 aa15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 SPATA31D4Q6ZUB0 917 aa15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 PALB2Q86YC2 1186 aa15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 RIN2Q8WYP3 895 aaPredicted RBP15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 NT5C3AQ9H0P0 336 aa15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 CHST7Q9NS84 486 aa15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 TNFSF13BQ9Y275 285 aa15.71■□□□□ 0.11
RTN3P1-201ENST00000536295 SF3B1O75533 1304 aaKnown RBP eCLIP15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 SLC16A4O15374 487 aa15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 GLUD1P00367 558 aa15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 PLA2G4BP0C869 781 aa15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 RPL17P18621 184 aaKnown RBP15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 OSTNP61366 133 aa15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 ZNF568Q3ZCX4 644 aa15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 HYIQ5T013 277 aa15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 PRSS55Q6UWB4 352 aaPredicted RBP15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 TAS1R3Q7RTX0 852 aa15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 APBB1IPQ7Z5R6 666 aaPredicted RBP15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 GPR149Q86SP6 731 aa15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 CEP57Q86XR8 500 aa15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 CEP120Q8N960 986 aa15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 TDRD5Q8NAT2 981 aaKnown RBP15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 ACO2Q99798 780 aaKnown RBP15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 TARS2Q9BW92 718 aaKnown RBP15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 MRPL4Q9BYD3 311 aaKnown RBP15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 TMEM134Q9H6X4 195 aa15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 RXFP1Q9HBX9 757 aa15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 ARHGAP28Q9P2N2 729 aa15.7■□□□□ 0.1
RTN3P1-201ENST00000536295 NPHP3-ACAD11A0A0J9YXS1 232 aa15.69■□□□□ 0.1
RTN3P1-201ENST00000536295 HARSP12081 509 aaKnown RBP15.69■□□□□ 0.1
RTN3P1-201ENST00000536295 GUCY2CP25092 1073 aa15.69■□□□□ 0.1
RTN3P1-201ENST00000536295 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
RTN3P1-201ENST00000536295 NAB2Q15742 525 aa15.69■□□□□ 0.1
RTN3P1-201ENST00000536295 RTP2Q5QGT7 225 aa15.69■□□□□ 0.1
RTN3P1-201ENST00000536295 FAM171A1Q5VUB5 890 aa15.69■□□□□ 0.1
RTN3P1-201ENST00000536295 SYT2Q8N9I0 419 aaPredicted RBP15.69■□□□□ 0.1
RTN3P1-201ENST00000536295 PBXIP1Q96AQ6 731 aa15.69■□□□□ 0.1
RTN3P1-201ENST00000536295 TCHPQ9BT92 498 aa15.69■□□□□ 0.1
RTN3P1-201ENST00000536295 TIPINQ9BVW5 301 aa15.69■□□□□ 0.1
RTN3P1-201ENST00000536295 CDT1Q9H211 546 aa15.69■□□□□ 0.1
RTN3P1-201ENST00000536295 RBM19Q9Y4C8 960 aaKnown RBP15.69■□□□□ 0.1
RTN3P1-201ENST00000536295 CCDC195A0A1B0GUA6 201 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 TGM5O43548 720 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 ASGR2P07307 311 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 PLS3P13797 630 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 UBA7P41226 1012 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 YARSP54577 528 aaKnown RBP15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 SLC12A3P55017 1021 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 SIGLEC14Q08ET2 396 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 STRN3Q13033 797 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 CUL4AQ13619 759 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 DHX8Q14562 1220 aaKnown RBP15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 SF3A1Q15459 793 aaKnown RBP15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 TMEM119Q4V9L6 283 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 ELMSAN1Q6PJG2 1045 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 CCDC149Q6ZUS6 474 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 BRAPQ7Z569 592 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 KREMEN2Q8NCW0 462 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 RASSF8Q8NHQ8 419 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 MFSD14AQ96MC6 490 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 CCDC94Q9BW85 323 aaPredicted RBP15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 C17orf75Q9HAS0 396 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 GOLGA2P5Q9HBQ8 144 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 LIMD1Q9UGP4 676 aa15.68■□□□□ 0.1
RTN3P1-201ENST00000536295 DPP7Q9UHL4 492 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms