RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 MYCLP12524 364 aaPredicted RBP17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 COILP38432 576 aaPredicted RBP17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 FNTAP49354 379 aa17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 PDE6CP51160 858 aa17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 ENPEPQ07075 957 aa17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 IFT88Q13099 833 aa17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 DRP2Q13474 957 aa17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 SLC29A2Q14542 456 aa17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 SLMAPQ14BN4 828 aa17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 C6orf118Q5T5N4 469 aa17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 CYFIP1Q7L576 1253 aa17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 OTUD6AQ7L8S5 288 aa17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 CCDC105Q8IYK2 499 aa17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 BBXQ8WY36 941 aaPredicted RBP17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 RNF25Q96BH1 459 aaPredicted RBP17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 PDCD2LQ9BRP1 358 aa17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 PLVAPQ9BX97 442 aa17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 ZNF277Q9NRM2 450 aaPredicted RBP17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 DDX20Q9UHI6 824 aaKnown RBP17.21■□□□□ 0.34
CHMP1A-202ENST00000535997 DENND3A2RUS2 1198 aa17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 C5orf60A6NFR6 353 aa17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 WNT10BO00744 389 aa17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 GRIN3BO60391 1043 aa17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 SHBGP04278 402 aa17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 ACAD10Q6JQN1 1059 aa17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 XRRA1Q6P2D8 792 aa17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 ANO5Q75V66 913 aa17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 TRMT1LQ7Z2T5 733 aaKnown RBP17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 C12orf50Q8NA57 414 aaPredicted RBP17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 DDX1Q92499 740 aaKnown RBP17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 ZNF653Q96CK0 615 aa17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 SAAL1Q96ER3 474 aa17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 POP1Q99575 1024 aaKnown RBP17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 TMEM109Q9BVC6 243 aa17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 KMT5AQ9NQR1 393 aa17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 PXMP2Q9NR77 195 aa17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 ZNRF3Q9ULT6 936 aa17.2■□□□□ 0.34
CHMP1A-202ENST00000535997 MAFGO15525 162 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 ATMINO43313 823 aaPredicted RBP17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 RARGP13631 454 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 ERMARDQ5T6L9 678 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 PLA2G4FQ68DD2 849 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 MMS22LQ6ZRQ5 1243 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 ENOSF1Q7L5Y1 443 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 KAT2BQ92831 832 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 MOV10L1Q9BXT6 1211 aaKnown RBP17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 SEMA4AQ9H3S1 761 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 LRRC19Q9H756 370 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 LRRC4CQ9HCJ2 640 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 GINM1Q9NU53 330 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 PCDHA10Q9Y5I2 948 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 CAPN7Q9Y6W3 813 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 RARAP10276 462 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 SIX1Q15475 284 aaPredicted RBP17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 NBPF9Q3BBW0 867 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 RNF207Q6ZRF8 634 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 SV2AQ7L0J3 742 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 TAS1R2Q8TE23 839 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 ART4Q93070 314 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 FAM81BQ96LP2 452 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 SENP7Q9BQF6 1050 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.19■□□□□ 0.342e-6■■■■■ 131.4
CHMP1A-202ENST00000535997 PASKQ96RG2 1323 aa17.19■□□□□ 0.34
CHMP1A-202ENST00000535997 FDX1P10109 184 aa17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 MMP13P45452 471 aa17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 GCNT1Q02742 428 aa17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 ADCY2Q08462 1091 aa17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 RNF187Q5TA31 235 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 ARHGEF16Q5VV41 709 aa17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 BTBD6Q96KE9 485 aa17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 CTDP1Q9Y5B0 961 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 TCRBV7S2A1N4TA0A589 114 aa17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 TESPA1A2RU30 521 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 FSCN2O14926 492 aa17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 ZBED4O75132 1171 aa17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 ZC3H11AO75152 810 aaKnown RBP eCLIP17.18■□□□□ 0.342e-6■■■■■ 37.4
CHMP1A-202ENST00000535997 CYP24A1Q07973 514 aa17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 BRDTQ58F21 947 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 SUGP1Q8IWZ8 645 aaKnown RBP17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 CNPY4Q8N129 248 aa17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 POMGNT1Q8WZA1 660 aa17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 SLCO2A1Q92959 643 aa17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 SEC16BQ96JE7 1060 aa17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 CABS1Q96KC9 395 aa17.18■□□□□ 0.34
CHMP1A-202ENST00000535997 H0YHG0 523 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 RGS16O15492 202 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 DKC1O60832 514 aaKnown RBP eCLIP17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 AGTP01019 485 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 GKAP1Q5VSY0 366 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 CPLX4Q7Z7G2 160 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 NLRX1Q86UT6 975 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 VSIG10LQ86VR7 867 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 TATDN2Q93075 761 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 XPO6Q96QU8 1125 aaKnown RBP17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 KIFC3Q9BVG8 833 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 STMN4Q9H169 189 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 TLDC2A0PJX2 215 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 ECEL1O95672 775 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 GARTP22102 1010 aa17.17■□□□□ 0.34
CHMP1A-202ENST00000535997 RTP1P59025 263 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms