RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 FERP16591 822 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 CHRNB2P17787 502 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 CAP1Q01518 475 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 HIC1Q14526 733 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 SLC9C1Q4G0N8 1177 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 SLFN12LQ6IEE8 588 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 TRIM50Q86XT4 487 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 BRSK2Q8IWQ3 736 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 PRPF31Q8WWY3 499 aaKnown RBP8.66□□□□□ -1.02
COL21A1-212ENST00000535941 SLC7A3Q8WY07 619 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 IFT74Q96LB3 600 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 ISCUQ9H1K1 167 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 C2orf40Q9H1Z8 148 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 NAGPAQ9UK23 515 aa8.66□□□□□ -1.02
COL21A1-212ENST00000535941 TDRD15B5MCY1 1934 aaKnown RBP8.66□□□□□ -1.02
COL21A1-212ENST00000535941 EXOC3O60645 756 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 ADCYAP1R1P41586 468 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 NLRP11P59045 1033 aaKnown RBP8.65□□□□□ -1.02
COL21A1-212ENST00000535941 GFPT1Q06210 699 aaPredicted RBP8.65□□□□□ -1.02
COL21A1-212ENST00000535941 PRPF4BQ13523 1007 aaKnown RBP8.65□□□□□ -1.02
COL21A1-212ENST00000535941 KRT39Q6A163 491 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 GJB7Q6PEY0 223 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 MTHFD1LQ6UB35 978 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 SLC35F6Q8N357 371 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 EVI5O60447 810 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 GPR32O75388 356 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 H2AFXP16104 143 aaPredicted RBP8.65□□□□□ -1.02
COL21A1-212ENST00000535941 TTC31Q49AM3 519 aaPredicted RBP8.65□□□□□ -1.02
COL21A1-212ENST00000535941 TDRD10Q5VZ19 366 aaKnown RBP8.65□□□□□ -1.02
COL21A1-212ENST00000535941 TRPV1Q8NER1 839 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 SOCS4Q8WXH5 440 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 APBA2Q99767 749 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 VRTNQ9H8Y1 702 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 MLXIPQ9HAP2 919 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 ARGLU1Q9NWB6 273 aaPredicted RBP8.65□□□□□ -1.02
COL21A1-212ENST00000535941 TNFSF13BQ9Y275 285 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 CEP83Q9Y592 693 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 CAPN6Q9Y6Q1 641 aa8.65□□□□□ -1.02
COL21A1-212ENST00000535941 ACKR2O00590 384 aa8.65□□□□□ -1.03
COL21A1-212ENST00000535941 TOM1L1O75674 476 aa8.65□□□□□ -1.03
COL21A1-212ENST00000535941 SLU7O95391 586 aaKnown RBP8.65□□□□□ -1.03
COL21A1-212ENST00000535941 STAU1O95793 577 aaKnown RBP8.65□□□□□ -1.03
COL21A1-212ENST00000535941 LDHAP00338 332 aaKnown RBP8.65□□□□□ -1.03
COL21A1-212ENST00000535941 CYBAP13498 195 aa8.65□□□□□ -1.03
COL21A1-212ENST00000535941 ASIC2Q16515 512 aa8.65□□□□□ -1.03
COL21A1-212ENST00000535941 MAEAQ7L5Y9 396 aa8.65□□□□□ -1.03
COL21A1-212ENST00000535941 RNF217Q8TC41 542 aa8.65□□□□□ -1.03
COL21A1-212ENST00000535941 CALR3Q96L12 384 aaKnown RBP8.65□□□□□ -1.03
COL21A1-212ENST00000535941 MINDY3Q9H8M7 445 aa8.65□□□□□ -1.03
COL21A1-212ENST00000535941 DNAJC12Q9UKB3 198 aa8.65□□□□□ -1.03
COL21A1-212ENST00000535941 TFR2Q9UP52 801 aa8.65□□□□□ -1.03
COL21A1-212ENST00000535941 CLEC11AQ9Y240 323 aa8.65□□□□□ -1.03
COL21A1-212ENST00000535941 DUSP10Q9Y6W6 482 aa8.65□□□□□ -1.03
COL21A1-212ENST00000535941 MAGEB2O15479 319 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 B4GALT4O60513 344 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 CCDC172P0C7W6 258 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 DRAP1Q14919 205 aaPredicted RBP8.64□□□□□ -1.03
COL21A1-212ENST00000535941 PCBP1Q15365 356 aaKnown RBP eCLIP8.64□□□□□ -1.03
COL21A1-212ENST00000535941 DCAF17Q5H9S7 520 aaPredicted RBP8.64□□□□□ -1.03
COL21A1-212ENST00000535941 ZBTB41Q5SVQ8 909 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 FAM81BQ96LP2 452 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 CRACR2AQ9BSW2 395 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 PCIF1Q9H4Z3 704 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 FAM124BQ9H5Z6 455 aaPredicted RBP8.64□□□□□ -1.03
COL21A1-212ENST00000535941 CDC23Q9UJX2 597 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 EFCAB8A8MWE9 144 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 STAT1P42224 750 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 HUNKP57058 714 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 CCSAPQ6IQ19 270 aaPredicted RBP8.64□□□□□ -1.03
COL21A1-212ENST00000535941 TMCO3Q6UWJ1 677 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 SV2AQ7L0J3 742 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 ENOSF1Q7L5Y1 443 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 SESTD1Q86VW0 696 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 WDR49Q8IV35 697 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 MSANTD4Q8NCY6 345 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 AP3M2P53677 418 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 XKR4Q5GH76 650 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 MEI1Q5TIA1 1274 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 ALKAL1Q6UXT8 129 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 RPAINQ86UA6 219 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 ZNF410Q86VK4 478 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 SYCP3Q8IZU3 236 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 EPS8L1Q8TE68 723 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 SAAL1Q96ER3 474 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 CCDC42Q96M95 316 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 IFIH1Q9BYX4 1025 aaKnown RBP8.64□□□□□ -1.03
COL21A1-212ENST00000535941 AZI2Q9H6S1 392 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 NLRC4Q9NPP4 1024 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 LCMT1Q9UIC8 334 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 TMEM59LQ9UK28 342 aa8.64□□□□□ -1.03
COL21A1-212ENST00000535941 AGO2Q9UKV8 859 aaKnown RBP8.64□□□□□ -1.03
COL21A1-212ENST00000535941 SCN1AP35498 2009 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 CA12O43570 354 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 KRT86O43790 486 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 INSRRP14616 1297 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 MXI1P50539 228 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 WHAMMP3Q1A5X7 153 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 LIMS2Q7Z4I7 341 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 FBXL13Q8NEE6 735 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 AFG1LQ8WV93 481 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms