RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 FMO1Q01740 532 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 FAM153CQ494X1 144 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 EEPD1Q7L9B9 569 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 USP37Q86T82 979 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 RHOT2Q8IXI1 618 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 CASKIN2Q8WXE0 1202 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 DHX38Q92620 1227 aaKnown RBP14.4□□□□□ -0.1
VPS33B-202ENST00000535906 CALR3Q96L12 384 aaKnown RBP14.4□□□□□ -0.1
VPS33B-202ENST00000535906 NT5C1BQ96P26 610 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 ZIM3Q96PE6 472 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 HAPLN2Q9GZV7 340 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 FAM153AQ9UHL3 310 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 A0A0G2JLL6 359 aaPredicted RBP14.4□□□□□ -0.1
VPS33B-202ENST00000535906 H0YCG3 227 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 KRIT1O00522 736 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 SART1O43290 800 aaKnown RBP14.4□□□□□ -0.1
VPS33B-202ENST00000535906 CYP11B1P15538 503 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 KCTD19Q17RG1 926 aaPredicted RBP14.4□□□□□ -0.1
VPS33B-202ENST00000535906 LMBRD2Q68DH5 695 aaPredicted RBP14.4□□□□□ -0.1
VPS33B-202ENST00000535906 FOXR1Q6PIV2 292 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 MOB2Q70IA6 237 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 PRRT2Q7Z6L0 340 aaPredicted RBP14.4□□□□□ -0.1
VPS33B-202ENST00000535906 SRLQ86TD4 932 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 WHAMMQ8TF30 809 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.4□□□□□ -0.1
VPS33B-202ENST00000535906 NIFKQ9BYG3 293 aaKnown RBP14.4□□□□□ -0.1
VPS33B-202ENST00000535906 DDX47Q9H0S4 455 aaKnown RBP14.4□□□□□ -0.1
VPS33B-202ENST00000535906 CTTNBP2NLQ9P2B4 639 aa14.4□□□□□ -0.1
VPS33B-202ENST00000535906 LRRIQ4A6NIV6 560 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 EXTL3O43909 919 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 PPFIA4O75335 1185 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 ARL2P36404 184 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 ACOT2P49753 483 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 HADHBP55084 474 aaKnown RBP14.39□□□□□ -0.11
VPS33B-202ENST00000535906 NLRP11P59045 1033 aaKnown RBP14.39□□□□□ -0.11
VPS33B-202ENST00000535906 GPC5P78333 572 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 IRX3P78415 501 aaPredicted RBP14.39□□□□□ -0.11
VPS33B-202ENST00000535906 IQCKQ8N0W5 287 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 EIF1ADQ8N9N8 165 aaKnown RBP14.39□□□□□ -0.11
VPS33B-202ENST00000535906 SLC7A3Q8WY07 619 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 ZBTB45Q96K62 511 aaPredicted RBP14.39□□□□□ -0.11
VPS33B-202ENST00000535906 ASCC2Q9H1I8 757 aaPredicted RBP14.39□□□□□ -0.11
VPS33B-202ENST00000535906 ALG6Q9Y672 507 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 STYXL1Q9Y6J8 313 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 ZNFX1Q9P2E3 1918 aaKnown RBP14.39□□□□□ -0.11
VPS33B-202ENST00000535906 ATMINO43313 823 aaPredicted RBP14.39□□□□□ -0.11
VPS33B-202ENST00000535906 CNMDO75829 334 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 GZMAP12544 262 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 NAMPTP43490 491 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 STRN3Q13033 797 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 LY6KQ17RY6 165 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 C15orf39Q6ZRI6 1047 aa14.39□□□□□ -0.11
VPS33B-202ENST00000535906 PSPC1Q8WXF1 523 aaKnown RBP14.39□□□□□ -0.11
VPS33B-202ENST00000535906 K7ERI5 159 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 CALCAP01258 141 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 FGGP02679 453 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 EDN1P05305 212 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 ABCD1P33897 745 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 IREB2P48200 963 aaKnown RBP14.38□□□□□ -0.11
VPS33B-202ENST00000535906 ERVK-9P63128 1117 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 CLDN10P78369 228 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 IRX5P78411 483 aaPredicted RBP14.38□□□□□ -0.11
VPS33B-202ENST00000535906 TCEAL1Q15170 157 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 TARBP2Q15633 366 aaKnown RBP14.38□□□□□ -0.11
VPS33B-202ENST00000535906 TTMPQ5BVD1 217 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 CFAP58Q5T655 872 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 CRELD2Q6UXH1 353 aaPredicted RBP14.38□□□□□ -0.11
VPS33B-202ENST00000535906 DEPTORQ8TB45 409 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 DDX1Q92499 740 aaKnown RBP14.38□□□□□ -0.11
VPS33B-202ENST00000535906 ALG3Q92685 438 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 ARL8AQ96BM9 186 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 RNF181Q9P0P0 153 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 KCNG1Q9UIX4 513 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 AGO2Q9UKV8 859 aaKnown RBP14.38□□□□□ -0.11
VPS33B-202ENST00000535906 TTC7AQ9ULT0 858 aaPredicted RBP14.38□□□□□ -0.11
VPS33B-202ENST00000535906 RRP15Q9Y3B9 282 aaKnown RBP14.38□□□□□ -0.11
VPS33B-202ENST00000535906 NR2E1Q9Y466 385 aa14.38□□□□□ -0.11
VPS33B-202ENST00000535906 CCDC188H7C350 402 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 TCF7P36402 384 aaPredicted RBP14.37□□□□□ -0.11
VPS33B-202ENST00000535906 STAT5BP51692 787 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 CDR2Q01850 454 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 ENPEPQ07075 957 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 DRP2Q13474 957 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 PSMD6Q15008 389 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 CAPS2Q9BXY5 557 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 TAF1DQ9H5J8 278 aaPredicted RBP14.37□□□□□ -0.11
VPS33B-202ENST00000535906 KIAA1586Q9HCI6 787 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 TXNRD2Q9NNW7 524 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 AMACRQ9UHK6 382 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 LCMT1Q9UIC8 334 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 PTPRJQ12913 1337 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 MYO1CO00159 1063 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 GRIN3BO60391 1043 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 GGPS1O95749 300 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 PGK2P07205 417 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 TNNI1P19237 187 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 PDE6CP51160 858 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 IRAK1P51617 712 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 GUCY2FP51841 1108 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 GCNT1Q02742 428 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms