RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 CCDC134Q9H6E4 229 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 MIF4GDA9UHW6 222 aaKnown RBP14.34□□□□□ -0.11
HDAC4-214ENST00000535493 NDUFB10O96000 172 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 HLA-DOAP06340 250 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 ADCY8P40145 1251 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 ICA1Q05084 483 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 DNAJC3Q13217 504 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 MTM1Q13496 603 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 APOBEC3HQ6NTF7 200 aaKnown RBP14.34□□□□□ -0.11
HDAC4-214ENST00000535493 CRELD2Q6UXH1 353 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-214ENST00000535493 CD101Q93033 1021 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 UTP4Q969X6 686 aaKnown RBP14.34□□□□□ -0.11
HDAC4-214ENST00000535493 DMAC2Q9NW81 257 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 IGLV3-22A0A075B6J6 115 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 ARP10275 920 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 ALAS1P13196 640 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 AP3B2Q13367 1082 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 RIPK1Q13546 671 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 ANKRD20A2Q5SQ80 823 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 ANKRD20A1Q5TYW2 823 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 ANKRD20A3Q5VUR7 823 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 ZNF449Q6P9G9 518 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 DAW1Q8N136 415 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 TBC1D22AQ8WUA7 517 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 KREMEN1Q96MU8 473 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 POLR3CQ9BUI4 534 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-214ENST00000535493 PARP2Q9UGN5 583 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 HAO1Q9UJM8 370 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 NAALADL1Q9UQQ1 740 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 ARL2BPQ9Y2Y0 163 aa14.34□□□□□ -0.11
HDAC4-214ENST00000535493 MYH11P35749 1972 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 EME2A4GXA9 379 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-214ENST00000535493 GAP43P17677 238 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 FAM182AQ5T1J6 154 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 C11orf63Q6NUN7 778 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 CKAP2Q8WWK9 683 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 SEMA4DQ92854 862 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 ARHGEF3Q9NR81 526 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 TOPORSQ9NS56 1045 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-214ENST00000535493 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-214ENST00000535493 NHSQ6T4R5 1651 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 EIF3DO15371 548 aaKnown RBP eCLIP14.33□□□□□ -0.126e-11■■■□□ 14.9
HDAC4-214ENST00000535493 GAS7O60861 476 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 ABL2P42684 1182 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 VAMP7P51809 220 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 RWDD2BP57060 319 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 TMED2Q15363 201 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 C1orf220Q5T0J3 134 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 TMEM63BQ5T3F8 832 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 MFSD5Q6N075 450 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 BTNL9Q6UXG8 535 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 ERP27Q96DN0 273 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 SAAL1Q96ER3 474 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 PITPNM3Q9BZ71 974 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 STMN4Q9H169 189 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-214ENST00000535493 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.33□□□□□ -0.121e-6■■■■□ 26.1
HDAC4-214ENST00000535493 SLC5A4Q9NY91 659 aa14.33□□□□□ -0.12
HDAC4-214ENST00000535493 GSTTP1A0A1W2PQM5 241 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 TBX3O15119 743 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 TTC4O95801 387 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 FMO1Q01740 532 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 ZYXQ15942 572 aaKnown RBP14.32□□□□□ -0.12
HDAC4-214ENST00000535493 SYDE2Q5VT97 1194 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 LXNQ9BS40 222 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 PI4K2AQ9BTU6 479 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 YIPF3Q9GZM5 350 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 RXFP1Q9HBX9 757 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 GPRC5CQ9NQ84 441 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 KLHL11Q9NVR0 708 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 KLHL14Q9P2G3 628 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 ANAPC7Q9UJX3 599 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 ATP2A2P16615 1042 aaKnown RBP14.32□□□□□ -0.12
HDAC4-214ENST00000535493 RRM1P23921 792 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 KIFC3Q9BVG8 833 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 TMEM117Q9H0C3 514 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 WNT8AQ9H1J5 351 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 MYLK2Q9H1R3 596 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 UNC45AQ9H3U1 944 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 NINJ2Q9NZG7 142 aa14.32□□□□□ -0.12
HDAC4-214ENST00000535493 NOCTQ9UK39 431 aaKnown RBP14.32□□□□□ -0.12
HDAC4-214ENST00000535493 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.32□□□□□ -0.12
HDAC4-214ENST00000535493 COL14A1Q05707 1796 aaKnown RBP14.31□□□□□ -0.12
HDAC4-214ENST00000535493 A0A1W2PRG0 241 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 BMP3P12645 472 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 ALADP13716 330 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 GM2AP17900 193 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 IVDP26440 423 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 ECE1P42892 770 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 WDR4P57081 412 aaKnown RBP14.31□□□□□ -0.12
HDAC4-214ENST00000535493 RASA3Q14644 834 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 ASRGL1Q7L266 308 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 SH3BP5LQ7L8J4 393 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 VSIG1Q86XK7 387 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 CBWD2Q8IUF1 395 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 C4orf33Q8N1A6 199 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 MAB21L3Q8N8X9 362 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 CPA5Q8WXQ8 436 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 RUNDC3BQ96NL0 473 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 MKNK1Q9BUB5 465 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 TMEM109Q9BVC6 243 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms