RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 KIZQ2M2Z5 673 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 C6orf118Q5T5N4 469 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 LDHDQ86WU2 507 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 CPA5Q8WXQ8 436 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 TBC1D22BQ9NU19 505 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 PIN4Q9Y237 131 aaKnown RBP13.37□□□□□ -0.27
SPG11-203ENST00000535302 ZNF521Q96K83 1311 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 NBNO60934 754 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 GRIK1P39086 918 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
SPG11-203ENST00000535302 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.37□□□□□ -0.27
SPG11-203ENST00000535302 SKIP12755 728 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 IFNA8P32881 189 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 PAPOLAP51003 745 aaKnown RBP13.36□□□□□ -0.27
SPG11-203ENST00000535302 PCSK7Q16549 785 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 SHC4Q6S5L8 630 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 MCPH1Q8NEM0 835 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 HSPBP1Q9NZL4 362 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 ZNF185O15231 689 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 FGFR4P22455 802 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 ABCD1P33897 745 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 RANBP1P43487 201 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 RFX3P48380 749 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 OR6J1Q8NGC5 347 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 BTBD6Q96KE9 485 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 IL1RL2Q9HB29 575 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 C6orf203Q9P0P8 240 aaPredicted RBP13.36□□□□□ -0.27
SPG11-203ENST00000535302 PLIN5Q00G26 463 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 LRRC31Q6UY01 552 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 TTC8Q8TAM2 541 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 MS4A14Q96JA4 679 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 ECT2Q9H8V3 914 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 YWHABP31946 246 aaKnown RBP13.36□□□□□ -0.27
SPG11-203ENST00000535302 PMS2P54278 862 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 FMR1NBQ8N0W7 255 aaPredicted RBP13.36□□□□□ -0.27
SPG11-203ENST00000535302 NDUFAF2Q8N183 169 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 ACAD9Q9H845 621 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 ARHGEF37A1IGU5 675 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 ADCY2Q08462 1091 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 MAP3K4Q9Y6R4 1608 aa13.36□□□□□ -0.27
SPG11-203ENST00000535302 ARHGEF5Q12774 1597 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 EPB42P16452 691 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 GPD1LQ8N335 351 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 ASZ1Q8WWH4 475 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 FAM167AQ96KS9 214 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 MAGEB10Q96LZ2 347 aaPredicted RBP13.35□□□□□ -0.27
SPG11-203ENST00000535302 MRPL4Q9BYD3 311 aaKnown RBP13.35□□□□□ -0.27
SPG11-203ENST00000535302 SLC9A2Q9UBY0 812 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 PRAMEP78395 509 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 KRT76Q01546 638 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 MFSD4BQ5TF39 518 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 DTX3LQ8TDB6 740 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 CNOT10Q9H9A5 744 aaKnown RBP13.35□□□□□ -0.27
SPG11-203ENST00000535302 AGO2Q9UKV8 859 aaKnown RBP13.35□□□□□ -0.27
SPG11-203ENST00000535302 ATP1A1P05023 1023 aaKnown RBP13.35□□□□□ -0.27
SPG11-203ENST00000535302 ROR1Q01973 937 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 STOX1Q6ZVD7 989 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 RBM41Q96IZ5 413 aaKnown RBP13.35□□□□□ -0.27
SPG11-203ENST00000535302 PNMA8BQ9ULN7 279 aaPredicted RBP13.35□□□□□ -0.27
SPG11-203ENST00000535302 TTC26A0AVF1 554 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 PPARGP37231 505 aaPredicted RBP13.35□□□□□ -0.27
SPG11-203ENST00000535302 HEATR6Q6AI08 1181 aaKnown RBP13.35□□□□□ -0.27
SPG11-203ENST00000535302 GIMAP8Q8ND71 665 aaPredicted RBP13.35□□□□□ -0.27
SPG11-203ENST00000535302 AK9Q5TCS8 1911 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 TXNP10599 105 aaKnown RBP13.35□□□□□ -0.27
SPG11-203ENST00000535302 CUL3Q13618 768 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 PODNQ7Z5L7 613 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 OSBPL9Q96SU4 736 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 DOLKQ9UPQ8 538 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 LMNAP02545 664 aaKnown RBP13.35□□□□□ -0.27
SPG11-203ENST00000535302 PDGFRBP09619 1106 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 IMPDH2P12268 514 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 SPARCL1Q14515 664 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 CCDC142Q17RM4 750 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 TMA16Q96EY4 203 aaKnown RBP13.35□□□□□ -0.27
SPG11-203ENST00000535302 VPS39Q96JC1 886 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 MAP10Q9P2G4 905 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 SEL1LQ9UBV2 794 aa13.35□□□□□ -0.27
SPG11-203ENST00000535302 LINC00854A0A1B0GVQ3 168 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 ARHGEF9O43307 516 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 GRAP2O75791 330 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 SULT1E1P49888 294 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 ALS2CLQ60I27 953 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 PPP1R2P3Q6NXS1 205 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 GCOM2Q9BZD3 368 aaPredicted RBP13.34□□□□□ -0.27
SPG11-203ENST00000535302 DYRK4Q9NR20 520 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 PTCH1Q13635 1447 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 PRDM15P57071 1507 aaPredicted RBP13.34□□□□□ -0.27
SPG11-203ENST00000535302 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 CUL1Q13616 776 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 DEPDC1Q5TB30 811 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 NBPF15Q8N660 670 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 ICA1LQ8NDH6 482 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 CALB1P05937 261 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 ENO1P06733 434 aaKnown RBP13.34□□□□□ -0.27
SPG11-203ENST00000535302 HNRNPCP07910 306 aaKnown RBP eCLIP13.34□□□□□ -0.277e-10■■■■■ 30.9
SPG11-203ENST00000535302 MDM2Q00987 491 aaPredicted RBP13.34□□□□□ -0.27
SPG11-203ENST00000535302 NCAPHQ15003 741 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 PLA2G4FQ68DD2 849 aa13.34□□□□□ -0.27
SPG11-203ENST00000535302 FBXO40Q9UH90 709 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms