RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 NCALDP61601 193 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 POU5F1Q01860 360 aaKnown RBP7.31□□□□□ -1.24
RAG1-203ENST00000534663 ZBTB16Q05516 673 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 GABPAQ06546 454 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 FAM182AQ5T1J6 154 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 SYCP2LQ5T4T6 812 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 EMC10Q5UCC4 262 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 MIGA2Q7L4E1 593 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 EPM2AIP1Q7L775 607 aaPredicted RBP7.31□□□□□ -1.24
RAG1-203ENST00000534663 COL23A1Q86Y22 540 aaPredicted RBP7.31□□□□□ -1.24
RAG1-203ENST00000534663 CBWD2Q8IUF1 395 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 FMNL3Q8IVF7 1028 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 SPOCK2Q92563 424 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 ACSF2Q96CM8 615 aaPredicted RBP7.31□□□□□ -1.24
RAG1-203ENST00000534663 RMDN2Q96LZ7 410 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 CSRNP1Q96S65 589 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 ADAM7Q9H2U9 754 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 EPB41L4BQ9H329 900 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 SAYSD1Q9NPB0 183 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 PI4KBQ9UBF8 816 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 HAO1Q9UJM8 370 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 ARL2BPQ9Y2Y0 163 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 CTDP1Q9Y5B0 961 aaPredicted RBP7.31□□□□□ -1.24
RAG1-203ENST00000534663 LRP5O75197 1615 aa7.31□□□□□ -1.24
RAG1-203ENST00000534663 IPO5O00410 1097 aaKnown RBP7.3□□□□□ -1.24
RAG1-203ENST00000534663 RTN2O75298 545 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 HSPA6P17066 643 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 MSH2P43246 934 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 PRELPP51888 382 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 DYNLT1P63172 113 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 RASA3Q14644 834 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 HHATQ5VTY9 493 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 ARHGEF18Q6ZSZ5 1173 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 CROCCP2Q86T23 111 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 FITM2Q8N6M3 262 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 XXYLT1Q8NBI6 393 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 KLF6Q99612 283 aaPredicted RBP7.3□□□□□ -1.24
RAG1-203ENST00000534663 C11orf70Q9BRQ4 267 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 WDR18Q9BV38 432 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 TMEM117Q9H0C3 514 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 ATP6V0A4Q9HBG4 840 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 SLCO1B3Q9NPD5 702 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 HSPBP1Q9NZL4 362 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 PRR12Q9ULL5 1215 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 C15orf41Q9Y2V0 281 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 PAPPAQ13219 1627 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 BBOX1O75936 387 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 GJB6O95452 261 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 PAEPP09466 180 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 GHRP10912 638 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 IL1R1P14778 569 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 ATP2A2P16615 1042 aaKnown RBP7.3□□□□□ -1.24
RAG1-203ENST00000534663 TNNI1P19237 187 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 PTGIRP43119 386 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 STAT2P52630 851 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 SOX10P56693 466 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 ITIH4Q14624 930 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 LACTB2Q53H82 288 aaPredicted RBP7.3□□□□□ -1.24
RAG1-203ENST00000534663 XKR9Q5GH70 373 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 C1orf186Q6ZWK4 172 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 CYP4X1Q8N118 509 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 POMGNT1Q8WZA1 660 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 LENG9Q96B70 501 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 TEKT3Q9BXF9 490 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 WNT8AQ9H1J5 351 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 KIF9Q9HAQ2 790 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 A1CFQ9NQ94 594 aaKnown RBP7.3□□□□□ -1.24
RAG1-203ENST00000534663 FBXO28Q9NVF7 368 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 WRAP73Q9P2S5 460 aaPredicted RBP7.3□□□□□ -1.24
RAG1-203ENST00000534663 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.3□□□□□ -1.24
RAG1-203ENST00000534663 MYH11P35749 1972 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 CFAP73A6NFT4 308 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 HOXA7P31268 230 aaPredicted RBP7.3□□□□□ -1.24
RAG1-203ENST00000534663 SREBF1P36956 1147 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 RAD23BP54727 409 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 MFAP3P55082 362 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 IL9RQ01113 521 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 IZUMO3Q5VZ72 239 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 OTOP1Q7RTM1 612 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 KIFAP3Q92845 792 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 NT5C1BQ96P26 610 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 UNC45AQ9H3U1 944 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 OLFML3Q9NRN5 406 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 CNTNAP4Q9C0A0 1308 aa7.3□□□□□ -1.24
RAG1-203ENST00000534663 GTPBP10A4D1E9 387 aaKnown RBP7.29□□□□□ -1.24
RAG1-203ENST00000534663 SRRM3A6NNA2 597 aaPredicted RBP7.29□□□□□ -1.24
RAG1-203ENST00000534663 RALAP11233 206 aa7.29□□□□□ -1.24
RAG1-203ENST00000534663 RRP1BQ14684 758 aaKnown RBP7.29□□□□□ -1.24
RAG1-203ENST00000534663 CEP55Q53EZ4 464 aa7.29□□□□□ -1.24
RAG1-203ENST00000534663 WLSQ5T9L3 541 aa7.29□□□□□ -1.24
RAG1-203ENST00000534663 PLA2G4FQ68DD2 849 aa7.29□□□□□ -1.24
RAG1-203ENST00000534663 CAPRIN2Q6IMN6 1127 aaKnown RBP7.29□□□□□ -1.24
RAG1-203ENST00000534663 DPY19L2P1Q6NXN4 242 aa7.29□□□□□ -1.24
RAG1-203ENST00000534663 HAUS6Q7Z4H7 955 aa7.29□□□□□ -1.24
RAG1-203ENST00000534663 PIGWQ7Z7B1 504 aa7.29□□□□□ -1.24
RAG1-203ENST00000534663 ANKMY2Q8IV38 441 aa7.29□□□□□ -1.24
RAG1-203ENST00000534663 ACER1Q8TDN7 264 aa7.29□□□□□ -1.24
RAG1-203ENST00000534663 LRRC8CQ8TDW0 803 aa7.29□□□□□ -1.24
RAG1-203ENST00000534663 EPS8L1Q8TE68 723 aa7.29□□□□□ -1.24
RAG1-203ENST00000534663 DCAF4Q8WV16 495 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms