RNA–Protein interactions for RNA: ENST00000534446.1

LONRF1-209, Transcript of LON peptidase N-terminal domain and ring finger 1, human

TSL 3

Gene LONRF1, Length 679 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LONRF1-209	ENST00000534446	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	KLHL23	Q8NBE8	558 aa		10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	KIAA0895	Q8NCT3	520 aa		10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	ZNF507	Q8TCN5	953 aa		10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	URGCP	Q8TCY9	931 aa		10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	SCFD1	Q8WVM8	642 aa		10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	P2RX5	Q93086	422 aa		10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	BICD1	Q96G01	975 aa		10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	ACCS	Q96QU6	501 aa		10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	TMEM206	Q9H813	350 aa		10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	KLK14	Q9P0G3	267 aa		10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	KANSL3	Q9P2N6	904 aa		10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	ANKFY1	Q9P2R3	1169 aa		10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	PCDHB13	Q9Y5F0	798 aa		10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	MYO9B	Q13459	2157 aa		10.84	□□□□□ -0.67
LONRF1-209	ENST00000534446	CHD9	Q3L8U1	2897 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	GBF1	Q92538	1859 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	CLDN3	O15551	220 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	RHOBTB3	O94955	611 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	RPN1	P04843	607 aa	Known RBP	10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	GALT	P07902	379 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	HARS	P12081	509 aa	Known RBP	10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	PBX3	P40426	434 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	SLC11A1	P49279	550 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	BCAR1	P56945	870 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	PLCB3	Q01970	1234 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	GRIK3	Q13003	919 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	STK4	Q13043	487 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	GPM6B	Q13491	265 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	POSTN	Q15063	836 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	NAB2	Q15742	525 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	BMT2	Q1RMZ1	405 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	SEZ6	Q53EL9	994 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	ZBTB41	Q5SVQ8	909 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	SPOUT1	Q5T280	376 aa	Known RBP	10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	SLFN12L	Q6IEE8	588 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	KANK3	Q6NY19	840 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	KCNT2	Q6UVM3	1135 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	TMEM173	Q86WV6	379 aa	Predicted RBP	10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	COLGALT2	Q8IYK4	626 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	THNSL1	Q8IYQ7	743 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	SLC39A11	Q8N1S5	342 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	SPATA20	Q8TB22	786 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	SNX27	Q96L92	541 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	ACAP3	Q96P50	834 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	TMEM175	Q9BSA9	504 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	TCHP	Q9BT92	498 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	C11orf84	Q9BUA3	381 aa	Predicted RBP	10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	CCDC94	Q9BW85	323 aa	Predicted RBP	10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	SLC39A2	Q9NP94	309 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	AAAS	Q9NRG9	546 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	EXOC1	Q9NV70	894 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	CNTN3	Q9P232	1028 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	DNAJB4	Q9UDY4	337 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	EXOC7	Q9UPT5	735 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	GDA	Q9Y2T3	454 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	UBE4B	O95155	1302 aa		10.83	□□□□□ -0.68
LONRF1-209	ENST00000534446	OGT	O15294	1046 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	GRM6	O15303	877 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	PRPF40A	O75400	957 aa	Known RBP	10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	FGF18	O76093	207 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	ADRB2	P07550	413 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	CLTA	P09496	248 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	KCNE1	P15382	129 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	FOSL2	P15408	326 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	DNAJB1	P25685	340 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	TNFSF9	P41273	254 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	OSTN	P61366	133 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	PSMD2	Q13200	908 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	PNOC	Q13519	176 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	CAMK1	Q14012	370 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	KCNB1	Q14721	858 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	SLC10A6	Q3KNW5	377 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	STXBP4	Q6ZWJ1	553 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	SPPL3	Q8TCT6	385 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	BCL7C	Q8WUZ0	217 aa	Predicted RBP	10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	ZNF558	Q96NG5	402 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	PPP1R10	Q96QC0	940 aa	Known RBP	10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	RPS6KC1	Q96S38	1066 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	GAS2L1	Q99501	681 aa	Predicted RBP	10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	MARCH5	Q9NX47	278 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	CPSF3	Q9UKF6	684 aa	Known RBP	10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	STXBP5L	Q9Y2K9	1186 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	PCDHB12	Q9Y5F1	795 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	MTCH2	Q9Y6C9	303 aa		10.82	□□□□□ -0.68
LONRF1-209	ENST00000534446	SPTBN5	Q9NRC6	3674 aa	Known RBP	10.81	□□□□□ -0.68
LONRF1-209	ENST00000534446	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.81	□□□□□ -0.68
LONRF1-209	ENST00000534446	SMIM28	A0A1B0GU29	152 aa		10.81	□□□□□ -0.68
LONRF1-209	ENST00000534446	CARNS1	A5YM72	827 aa		10.81	□□□□□ -0.68
LONRF1-209	ENST00000534446	NT5C1B-RDH14	C9J2C7	533 aa		10.81	□□□□□ -0.68
LONRF1-209	ENST00000534446	TGFB1I1	O43294	461 aa		10.81	□□□□□ -0.68
LONRF1-209	ENST00000534446	EFEMP2	O95967	443 aa		10.81	□□□□□ -0.68
LONRF1-209	ENST00000534446	CXCL8	P10145	99 aa		10.81	□□□□□ -0.68
LONRF1-209	ENST00000534446	GART	P22102	1010 aa		10.81	□□□□□ -0.68
LONRF1-209	ENST00000534446	PPM1A	P35813	382 aa		10.81	□□□□□ -0.68
LONRF1-209	ENST00000534446	MATR3	P43243	847 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
LONRF1-209	ENST00000534446	YARS	P54577	528 aa	Known RBP	10.81	□□□□□ -0.68
LONRF1-209	ENST00000534446	UBE3A	Q05086	875 aa		10.81	□□□□□ -0.68

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