RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ACVR2BQ13705 512 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 KIR3DS1Q14943 382 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 GPNMBQ14956 572 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 ZXDCQ2QGD7 858 aaPredicted RBP3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 SPATS1Q496A3 300 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 NAA16Q6N069 864 aaPredicted RBP3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 ABRAQ8N0Z2 381 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 ZGPATQ8N5A5 531 aaKnown RBP3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 LINC01356Q8N9X3 169 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 RGS22Q8NE09 1264 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 NEK9Q8TD19 979 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 EDAQ92838 391 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 DYNLL2Q96FJ2 89 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 ZNF512BQ96KM6 892 aaPredicted RBP3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 FGD4Q96M96 766 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 TMEM74Q96NL1 305 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 GPR20Q99678 358 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 C17orf80Q9BSJ5 609 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 KCNH6Q9H252 994 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 MTIF3Q9H2K0 278 aaKnown RBP3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 TMPRSS5Q9H3S3 457 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 EPB41L4AQ9HCS5 686 aaPredicted RBP3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 MRS2Q9HD23 443 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 LUC7LQ9NQ29 371 aaKnown RBP3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 KLHL14Q9P2G3 628 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 NRBP1Q9UHY1 535 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 ZNF281Q9Y2X9 895 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 EP300Q09472 2414 aaPredicted RBP3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 GVINP1Q7Z2Y8 2422 aa3.61□□□□□ -1.83
CHMP4A-208ENST00000534106 ZNF292O60281 2723 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 SPTBN2O15020 2390 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 SMCHD1A6NHR9 2005 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 TMEM82A0PJX8 343 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 LINC01553A4QN01 128 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 FADS2P1A8MWK0 482 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 KIF28PB7ZC32 967 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 E9PSI1 815 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 VWA5AO00534 786 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 DNAJA2O60884 412 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 CIAO1O76071 339 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 BAG3O95817 575 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 EFEMP2O95967 443 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 HLA-DOAP06340 250 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 IQCF3P0C7M6 154 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 INSRRP14616 1297 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 PFKLP17858 780 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 ENDOUP21128 410 aaKnown RBP3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 CST5P28325 142 aaPredicted RBP3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 IL15P40933 162 aaPredicted RBP3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 ID4P47928 161 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 ERVK-21P61565 698 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 DAB2P98082 770 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 RAD51AP2Q09MP3 1159 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 BBS9Q3SYG4 887 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 TCEAL5Q5H9L2 206 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 GORABQ5T7V8 394 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 EEPD1Q7L9B9 569 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 REC114Q7Z4M0 266 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 FRMD5Q7Z6J6 570 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 RIOX2Q8IUF8 465 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 IGDCC3Q8IVU1 814 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 ADHFE1Q8IWW8 467 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 CPXCR1Q8N123 301 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 NAT16Q8N8M0 369 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 PCSK9Q8NBP7 692 aaKnown RBP3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 REPS2Q8NFH8 660 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 CHMP4CQ96CF2 233 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 DDX11Q96FC9 970 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 EAF1Q96JC9 268 aaPredicted RBP3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 NUP88Q99567 741 aaPredicted RBP3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 MKRN2Q9H000 416 aaKnown RBP3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 KATNBL1Q9H079 304 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 UPF3AQ9H1J1 476 aaKnown RBP3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 ALDH8A1Q9H2A2 487 aaPredicted RBP3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 CABP5Q9NP86 173 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 CHST7Q9NS84 486 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 ADAMTS5Q9UNA0 930 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 PCDHB14Q9Y5E9 798 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 ZNF536O15090 1300 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 MROH7Q68CQ1 1323 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 KMT2BQ9UMN6 2715 aaPredicted RBP3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 ACACBO00763 2458 aa3.6□□□□□ -1.83
CHMP4A-208ENST00000534106 TECTAO75443 2155 aa3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 ZNF318Q5VUA4 2279 aa3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 CYP2D7A0A087X1C5 515 aa3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 LINC01565O15544 149 aa3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 SIGLEC6O43699 453 aa3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 PRKAB2O43741 272 aa3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 CLEC3AO75596 197 aa3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 UBOX5O94941 541 aa3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 MAP4K4O95819 1239 aaPredicted RBP3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 SLC25A27O95847 323 aa3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 MYL3P08590 195 aa3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 AKR1B1P15121 316 aa3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 AVPR2P30518 371 aa3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 POLR2BP30876 1174 aaKnown RBP3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 LIMS1P48059 325 aa3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 SNAP25P60880 206 aa3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 WDR5P61964 334 aaKnown RBP3.59□□□□□ -1.83
CHMP4A-208ENST00000534106 ZXDAP98168 799 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms