RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 LRRC37A2A6NM11 1700 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 RPTORQ8N122 1335 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 SCO2A0A1W2PP80 73 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 IQCA1LA6NCM1 817 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 TBX3O15119 743 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 FOXN1O15353 648 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 SLC26A4O43511 780 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 DYRK3O43781 588 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 USP2O75604 605 aaPredicted RBP6.37□□□□□ -1.39
CHKA-208ENST00000533910 CYP3A4P08684 503 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 TAL1P17542 331 aaPredicted RBP6.37□□□□□ -1.39
CHKA-208ENST00000533910 ASPAP45381 313 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 SARSP49591 514 aaKnown RBP6.37□□□□□ -1.39
CHKA-208ENST00000533910 HSD17B4P51659 736 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 GYS2P54840 703 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 IGBP1P78318 339 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 SLC7A5Q01650 507 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 SPP2Q13103 211 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 VGLL4Q14135 290 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 IQCB1Q15051 598 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 GPR162Q16538 588 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 CALCRLQ16602 461 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 SLC10A6Q3KNW5 377 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 Q4G0T1 1027 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 FOXB2Q5VYV0 432 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 CCDC174Q6PII3 467 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 KRT26Q7Z3Y9 468 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 FILIP1Q7Z7B0 1213 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 LDHDQ86WU2 507 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 DTWD1Q8N5C7 304 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 SAMD3Q8N6K7 520 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 PDILTQ8N807 584 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 TRIML1Q8N9V2 468 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 IQUBQ8NA54 791 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 REPS2Q8NFH8 660 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 RIN3Q8TB24 985 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 HAS1Q92839 578 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 ERCC4Q92889 916 aaPredicted RBP6.37□□□□□ -1.39
CHKA-208ENST00000533910 LENG9Q96B70 501 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 DHX58Q96C10 678 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 CDCA5Q96FF9 252 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 PAGE5Q96GU1 130 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 CCDC34Q96HJ3 373 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 MMTAG2Q9BU76 263 aaKnown RBP6.37□□□□□ -1.39
CHKA-208ENST00000533910 BRINP2Q9C0B6 783 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 CUEDC2Q9H467 287 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 TAF1DQ9H5J8 278 aaPredicted RBP6.37□□□□□ -1.39
CHKA-208ENST00000533910 RPAP3Q9H6T3 665 aaPredicted RBP6.37□□□□□ -1.39
CHKA-208ENST00000533910 MAGEF1Q9HAY2 307 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 SSU72Q9NP77 194 aaKnown RBP6.37□□□□□ -1.39
CHKA-208ENST00000533910 KCNMB3Q9NPA1 279 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 DDX25Q9UHL0 483 aaKnown RBP6.37□□□□□ -1.39
CHKA-208ENST00000533910 ADAMTS5Q9UNA0 930 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 MRPL11Q9Y3B7 192 aaKnown RBP6.37□□□□□ -1.39
CHKA-208ENST00000533910 AFG3L2Q9Y4W6 797 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 PCDHA5Q9Y5H7 936 aa6.37□□□□□ -1.39
CHKA-208ENST00000533910 MEGF11A6BM72 1044 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 PP2D1A8MPX8 630 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 GCOM1H8Y6P7 765 aaPredicted RBP6.36□□□□□ -1.39
CHKA-208ENST00000533910 ATP2A1O14983 1001 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 FLOT1O75955 427 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 ASMTLO95671 621 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 MYL1P05976 194 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 POLR2MP0CAP2 368 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 GBP1P32455 592 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 UBA7P41226 1012 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 STAT6P42226 847 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 IREB2P48200 963 aaKnown RBP6.36□□□□□ -1.39
CHKA-208ENST00000533910 OAZ1P54368 228 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 YARSP54577 528 aaKnown RBP6.36□□□□□ -1.39
CHKA-208ENST00000533910 HMGCS2P54868 508 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 MORC3Q14149 939 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 ADGRE1Q14246 886 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 PDIA5Q14554 519 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 KARSQ15046 597 aaKnown RBP6.36□□□□□ -1.39
CHKA-208ENST00000533910 TMEM266Q2M3C6 531 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 C2orf27AQ580R0 203 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 PLEKHG4Q58EX7 1191 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 SLC6A19Q695T7 634 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 EEPD1Q7L9B9 569 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.36□□□□□ -1.39
CHKA-208ENST00000533910 LUZP1Q86V48 1076 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 DHX40Q8IX18 779 aaKnown RBP6.36□□□□□ -1.39
CHKA-208ENST00000533910 MRPL41Q8IXM3 137 aaKnown RBP6.36□□□□□ -1.39
CHKA-208ENST00000533910 GRAMD1CQ8IYS0 662 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 C2CD4AQ8NCU7 369 aaPredicted RBP6.36□□□□□ -1.39
CHKA-208ENST00000533910 SMG8Q8ND04 991 aaKnown RBP6.36□□□□□ -1.39
CHKA-208ENST00000533910 ETNPPLQ8TBG4 499 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 THAP3Q8WTV1 239 aaPredicted RBP6.36□□□□□ -1.39
CHKA-208ENST00000533910 CLEC4DQ8WXI8 215 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 ANP32BQ92688 251 aaKnown RBP6.36□□□□□ -1.39
CHKA-208ENST00000533910 FGD4Q96M96 766 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 RAB34Q9BZG1 259 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 MAF1Q9H063 256 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 NAT10Q9H0A0 1025 aaKnown RBP6.36□□□□□ -1.39
CHKA-208ENST00000533910 RNF208Q9H0X6 261 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 ATXN3LQ9H3M9 355 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 PIDD1Q9HB75 910 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 CYP4F12Q9HCS2 524 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 MAP3K20Q9NYL2 800 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms