RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 ZNF512BQ96KM6 892 aaPredicted RBP6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 KRT82Q9NSB4 513 aa6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 SH3BP1Q9Y3L3 701 aa6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 CD163L1Q9NR16 1453 aa6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 SPECC1L-ADORA2AF8WAN1 911 aa6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 CD4P01730 458 aa6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 VEGFAP15692 232 aaPredicted RBP6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 RASA1P20936 1047 aa6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 THPOP40225 353 aa6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 LIG3P49916 1009 aa6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 LBRQ14739 615 aaKnown RBP6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 SMAD1Q15797 465 aaKnown RBP6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 GLE1Q53GS7 698 aaKnown RBP6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 PID1Q7Z2X4 250 aa6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 SERPINI1Q99574 410 aa6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 ALDH8A1Q9H2A2 487 aaPredicted RBP6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 PRG3Q9Y2Y8 225 aaPredicted RBP6.77□□□□□ -1.33
UBQLN1-206ENST00000533705 CLTCL1P53675 1640 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 HBP1O60381 514 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 ZNF189O75820 626 aaPredicted RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 ALDH7A1P49419 539 aaKnown RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 ARL4DP49703 201 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 ATN1P54259 1190 aaPredicted RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 TPI1P60174 286 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 COPS2P61201 443 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 PRKCEQ02156 737 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 ZNF211Q13398 564 aaPredicted RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 LAMC2Q13753 1193 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 SNX17Q15036 470 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 TSGA10IPQ3SY00 556 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 SDE2Q6IQ49 451 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 SARM1Q6SZW1 724 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 KLHL29Q96CT2 875 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 C18orf8Q96DM3 657 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 DCUN1D1Q96GG9 259 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 PARD6BQ9BYG5 372 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 UPF3AQ9H1J1 476 aaKnown RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 AAASQ9NRG9 546 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 GTSE1Q9NYZ3 720 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 IQSEC2Q5JU85 1478 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 RRN3P2A6NIE6 340 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 PDHBP11177 359 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 RGS7P49802 495 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 SULT1E1P49888 294 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 SPARCL1Q14515 664 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 KCNB1Q14721 858 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 ZBTB41Q5SVQ8 909 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 ACBD5Q5T8D3 534 aaPredicted RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 PLA2G4FQ68DD2 849 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 XRRA1Q6P2D8 792 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 PPM1NQ8N819 430 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 STKLD1Q8NE28 680 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 CCSER1Q9C0I3 900 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 ANO9A1A5B4 782 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 CYP26A1O43174 497 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 PPFIA2O75334 1257 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 ESRRAP11474 423 aaPredicted RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 SLC8A1P32418 973 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 ALDH1A3P47895 512 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 STOX1Q6ZVD7 989 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 DCP1BQ8IZD4 617 aaKnown RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 CCNYL1Q8N7R7 359 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 CCDC138Q96M89 665 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 MOV10L1Q9BXT6 1211 aaKnown RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 WNT8AQ9H1J5 351 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 TXLNGQ9NUQ3 528 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 KCND2Q9NZV8 630 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 IQGAP3Q86VI3 1631 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 RNF17Q9BXT8 1623 aaKnown RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 C17orf102A2RUQ5 167 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 ZNF197O14709 1029 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 APOL1O14791 398 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 SLC16A3O15427 465 aaKnown RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 ANP32DO95626 131 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 NR1D1P20393 614 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 HDLBPQ00341 1268 aaKnown RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 GPS1Q13098 491 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 TBCCQ15814 346 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 SGSM1Q2NKQ1 1148 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 PLEKHH3Q7Z736 793 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 NCLNQ969V3 563 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 TMEM169Q96HH4 297 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 BPIFA3Q9BQP9 254 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 MXRA8Q9BRK3 442 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 TRIM9Q9C026 710 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 RRAGCQ9HB90 399 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 PRMT7Q9NVM4 692 aaPredicted RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 PPP1R9AQ9ULJ8 1098 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 PDS5AQ29RF7 1337 aaKnown RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 PNPLA6Q8IY17 1366 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 GPR75-ASB3A0A0A6YYF3 556 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 RASA4BC9J798 803 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 RASA4O43374 803 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 MRPS25P82663 173 aaKnown RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 EXOSC10Q01780 885 aaKnown RBP6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 NCOA4Q13772 614 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 ANKRD40Q6AI12 368 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 SHC4Q6S5L8 630 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 TRIM59Q8IWR1 403 aa6.76□□□□□ -1.33
UBQLN1-206ENST00000533705 RAB42Q8N4Z0 105 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms