RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 STX1AQ16623 288 aa19.03■□□□□ 0.64
NXF1-216ENST00000533499 PRPF38BQ5VTL8 546 aaKnown RBP19.03■□□□□ 0.64
NXF1-216ENST00000533499 CEP135Q66GS9 1140 aa19.03■□□□□ 0.64
NXF1-216ENST00000533499 GLB1LQ6UWU2 654 aa19.03■□□□□ 0.64
NXF1-216ENST00000533499 MRPL10Q7Z7H8 261 aaKnown RBP19.03■□□□□ 0.64
NXF1-216ENST00000533499 ZSWIM2Q8NEG5 633 aa19.03■□□□□ 0.64
NXF1-216ENST00000533499 RPS6KC1Q96S38 1066 aa19.03■□□□□ 0.64
NXF1-216ENST00000533499 GAD1Q99259 594 aa19.03■□□□□ 0.64
NXF1-216ENST00000533499 ELAC1Q9H777 363 aaKnown RBP19.03■□□□□ 0.64
NXF1-216ENST00000533499 RPF1Q9H9Y2 349 aaKnown RBP19.03■□□□□ 0.64
NXF1-216ENST00000533499 ANO10Q9NW15 660 aa19.03■□□□□ 0.64
NXF1-216ENST00000533499 CGNQ9P2M7 1197 aaKnown RBP19.03■□□□□ 0.64
NXF1-216ENST00000533499 COLQQ9Y215 455 aaPredicted RBP19.03■□□□□ 0.64
NXF1-216ENST00000533499 HOXA2O43364 376 aa19.02■□□□□ 0.64
NXF1-216ENST00000533499 TLL1O43897 1013 aa19.02■□□□□ 0.64
NXF1-216ENST00000533499 CLTAP09496 248 aa19.02■□□□□ 0.64
NXF1-216ENST00000533499 CCNE1P24864 410 aa19.02■□□□□ 0.64
NXF1-216ENST00000533499 MLH1P40692 756 aa19.02■□□□□ 0.64
NXF1-216ENST00000533499 SNRPFP62306 86 aaKnown RBP19.02■□□□□ 0.64
NXF1-216ENST00000533499 TYRO3Q06418 890 aa19.02■□□□□ 0.64
NXF1-216ENST00000533499 RASIP1Q5U651 963 aa19.02■□□□□ 0.64
NXF1-216ENST00000533499 ANKRD40Q6AI12 368 aa19.02■□□□□ 0.64
NXF1-216ENST00000533499 FAM109BQ6ICB4 259 aaPredicted RBP19.02■□□□□ 0.64
NXF1-216ENST00000533499 AGMOQ6ZNB7 445 aa19.02■□□□□ 0.64
NXF1-216ENST00000533499 ZNF598Q86UK7 904 aaKnown RBP19.02■□□□□ 0.64
NXF1-216ENST00000533499 GPD1LQ8N335 351 aa19.02■□□□□ 0.64
NXF1-216ENST00000533499 PHOSPHO2Q8TCD6 241 aa19.02■□□□□ 0.64
NXF1-216ENST00000533499 URGCPQ8TCY9 931 aa19.02■□□□□ 0.64
NXF1-216ENST00000533499 EEF2KMTQ96G04 330 aa19.02■□□□□ 0.64
NXF1-216ENST00000533499 TOPORSQ9NS56 1045 aaPredicted RBP19.02■□□□□ 0.64
NXF1-216ENST00000533499 STYXL1Q9Y6J8 313 aa19.02■□□□□ 0.64
NXF1-216ENST00000533499 PTPRSQ13332 1948 aa19.02■□□□□ 0.63
NXF1-216ENST00000533499 BICDL2A1A5D9 508 aa19.01■□□□□ 0.63
NXF1-216ENST00000533499 EXTL3O43909 919 aa19.01■□□□□ 0.63
NXF1-216ENST00000533499 GJB5O95377 273 aa19.01■□□□□ 0.63
NXF1-216ENST00000533499 LDHAP00338 332 aaKnown RBP19.01■□□□□ 0.63
NXF1-216ENST00000533499 CXCL8P10145 99 aa19.01■□□□□ 0.63
NXF1-216ENST00000533499 NR2F2P24468 414 aa19.01■□□□□ 0.63
NXF1-216ENST00000533499 RPL13P26373 211 aaKnown RBP19.01■□□□□ 0.63
NXF1-216ENST00000533499 PMS1P54277 932 aaKnown RBP19.01■□□□□ 0.63
NXF1-216ENST00000533499 RNASELQ05823 741 aaKnown RBP19.01■□□□□ 0.63
NXF1-216ENST00000533499 BTG3Q14201 252 aaPredicted RBP19.01■□□□□ 0.63
NXF1-216ENST00000533499 KYAT1Q16773 422 aa19.01■□□□□ 0.63
NXF1-216ENST00000533499 TPD52L1Q16890 204 aaPredicted RBP19.01■□□□□ 0.63
NXF1-216ENST00000533499 ZSCAN23Q3MJ62 389 aa19.01■□□□□ 0.63
NXF1-216ENST00000533499 COBLL1Q53SF7 1204 aa19.01■□□□□ 0.63
NXF1-216ENST00000533499 CLLU1OSQ5K130 101 aa19.01■□□□□ 0.63
NXF1-216ENST00000533499 SPOUT1Q5T280 376 aaKnown RBP19.01■□□□□ 0.63
NXF1-216ENST00000533499 XXYLT1Q8NBI6 393 aa19.01■□□□□ 0.63
NXF1-216ENST00000533499 ZFP42Q96MM3 310 aa19.01■□□□□ 0.63
NXF1-216ENST00000533499 UBN1Q9NPG3 1134 aa19.01■□□□□ 0.63
NXF1-216ENST00000533499 ARL5CA6NH57 179 aa19■□□□□ 0.63
NXF1-216ENST00000533499 POMCP01189 267 aa19■□□□□ 0.63
NXF1-216ENST00000533499 CCDC192P0DO97 292 aa19■□□□□ 0.63
NXF1-216ENST00000533499 SCNN1GP51170 649 aa19■□□□□ 0.63
NXF1-216ENST00000533499 SPAG1Q07617 926 aa19■□□□□ 0.63
NXF1-216ENST00000533499 ADAM9Q13443 819 aa19■□□□□ 0.63
NXF1-216ENST00000533499 GLRA4Q5JXX5 417 aa19■□□□□ 0.63
NXF1-216ENST00000533499 CENPPQ6IPU0 288 aa19■□□□□ 0.63
NXF1-216ENST00000533499 CBWD2Q8IUF1 395 aa19■□□□□ 0.63
NXF1-216ENST00000533499 TMEM117Q9H0C3 514 aa19■□□□□ 0.63
NXF1-216ENST00000533499 TRAF3IP3Q9Y228 551 aa19■□□□□ 0.63
NXF1-216ENST00000533499 GIT1Q9Y2X7 761 aa19■□□□□ 0.63
NXF1-216ENST00000533499 CITO14578 2027 aa19■□□□□ 0.63
NXF1-216ENST00000533499 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.99■□□□□ 0.63
NXF1-216ENST00000533499 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.99■□□□□ 0.63
NXF1-216ENST00000533499 ZNF233A6NK53 670 aa18.99■□□□□ 0.63
NXF1-216ENST00000533499 KIAA0391O15091 583 aaKnown RBP18.99■□□□□ 0.63
NXF1-216ENST00000533499 CETN3O15182 167 aa18.99■□□□□ 0.63
NXF1-216ENST00000533499 OFD1O75665 1012 aa18.99■□□□□ 0.63
NXF1-216ENST00000533499 DGKIO75912 1065 aa18.99■□□□□ 0.63
NXF1-216ENST00000533499 MYOGP15173 224 aa18.99■□□□□ 0.63
NXF1-216ENST00000533499 LRRC63Q05C16 580 aa18.99■□□□□ 0.63
NXF1-216ENST00000533499 PPP2R3AQ06190 1150 aa18.99■□□□□ 0.63
NXF1-216ENST00000533499 ENOX2Q16206 610 aaKnown RBP18.99■□□□□ 0.63
NXF1-216ENST00000533499 NOMO2Q5JPE7 1267 aa18.99■□□□□ 0.63
NXF1-216ENST00000533499 CREBRFQ8IUR6 639 aa18.99■□□□□ 0.63
NXF1-216ENST00000533499 FAM193BQ96PV7 902 aaPredicted RBP18.99■□□□□ 0.63
NXF1-216ENST00000533499 RAD9AQ99638 391 aa18.99■□□□□ 0.63
NXF1-216ENST00000533499 DNAJC25Q9H1X3 360 aa18.99■□□□□ 0.63
NXF1-216ENST00000533499 RBAKQ9NYW8 714 aaPredicted RBP18.99■□□□□ 0.63
NXF1-216ENST00000533499 CPSF3Q9UKF6 684 aaKnown RBP18.99■□□□□ 0.63
NXF1-216ENST00000533499 FRMD4BQ9Y2L6 1034 aa18.99■□□□□ 0.63
NXF1-216ENST00000533499 LACTBL1A8MY62 500 aa18.98■□□□□ 0.63
NXF1-216ENST00000533499 CASP4P49662 377 aa18.98■□□□□ 0.63
NXF1-216ENST00000533499 AFF1P51825 1210 aaKnown RBP18.98■□□□□ 0.63
NXF1-216ENST00000533499 SNRNP35Q16560 246 aaKnown RBP18.98■□□□□ 0.63
NXF1-216ENST00000533499 EDRF1Q3B7T1 1238 aa18.98■□□□□ 0.63
NXF1-216ENST00000533499 SLC10A6Q3KNW5 377 aa18.98■□□□□ 0.63
NXF1-216ENST00000533499 ANO6Q4KMQ2 910 aa18.98■□□□□ 0.63
NXF1-216ENST00000533499 ZCWPW2Q504Y3 356 aa18.98■□□□□ 0.63
NXF1-216ENST00000533499 C11orf57Q6ZUT1 292 aaPredicted RBP18.98■□□□□ 0.63
NXF1-216ENST00000533499 C12orf56Q8IXR9 622 aa18.98■□□□□ 0.63
NXF1-216ENST00000533499 CSGALNACT2Q8N6G5 542 aa18.98■□□□□ 0.63
NXF1-216ENST00000533499 CCDC127Q96BQ5 260 aa18.98■□□□□ 0.63
NXF1-216ENST00000533499 SNX27Q96L92 541 aa18.98■□□□□ 0.63
NXF1-216ENST00000533499 CXCL16Q9H2A7 254 aa18.98■□□□□ 0.63
NXF1-216ENST00000533499 KIAA1586Q9HCI6 787 aa18.98■□□□□ 0.63
NXF1-216ENST00000533499 RWDD2AQ9UIY3 292 aa18.98■□□□□ 0.63
NXF1-216ENST00000533499 MSRAQ9UJ68 235 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms