RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 MTA2O94776 668 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 DR1Q01658 176 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 CDR2Q01850 454 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 MTERF2Q49AM1 385 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 CYFIP1Q7L576 1253 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 SRLQ86TD4 932 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 MCPH1Q8NEM0 835 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 ATP6V1G3Q96LB4 118 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 POLR3FQ9H1D9 316 aaPredicted RBP16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 ACAD9Q9H845 621 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 RLFQ13129 1914 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 MIF4GDA9UHW6 222 aaKnown RBP16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 C19orf81C9J6K1 198 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 PYGMP11217 842 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 RTP1P59025 263 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 PDCLQ13371 301 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 PRKG1Q13976 671 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 TMC3Q7Z5M5 1100 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 LRRC45Q96CN5 670 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 C18orf8Q96DM3 657 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 BICD1Q96G01 975 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 RPS6KC1Q96S38 1066 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 NUP85Q9BW27 656 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 ATP6V0A4Q9HBG4 840 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 TMBIM4Q9HC24 238 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 LRRC4CQ9HCJ2 640 aa16.49■□□□□ 0.23
CACNA1E-208ENST00000533229 TCRBV7S2A1N4TA0A589 114 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 CYP1A2P05177 515 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 GARTP22102 1010 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 GTF2H1P32780 548 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 CTNNA1P35221 906 aaKnown RBP16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 PDE6CP51160 858 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 ZNF844Q08AG5 666 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 DUPD1Q68J44 220 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 C15orf39Q6ZRI6 1047 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 UBL4BQ8N7F7 174 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 PRELID2Q8N945 189 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 ZNF564Q8TBZ8 553 aaPredicted RBP16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 TMEM143Q96AN5 459 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 NAP1L3Q99457 506 aaPredicted RBP16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 HAPLN2Q9GZV7 340 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 FEZ2Q9UHY8 353 aaPredicted RBP16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 RRP15Q9Y3B9 282 aaKnown RBP16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 PARP14Q460N5 1801 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 SUPT20HL2P0C7V6 817 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 CNTN2Q02246 1040 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 SUPT20HL1Q3ZLR7 823 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 EMC10Q5UCC4 262 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 LRIG3Q6UXM1 1119 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 DLK2Q6UY11 383 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 KDM7AQ6ZMT4 941 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 C1orf131Q8NDD1 294 aaKnown RBP16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 UBLCP1Q8WVY7 318 aaPredicted RBP16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 ZNF653Q96CK0 615 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 ERP44Q9BS26 406 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 FAM114A2Q9NRY5 505 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 AFG3L2Q9Y4W6 797 aa16.48■□□□□ 0.23
CACNA1E-208ENST00000533229 GOLGA6L10A0A0M3HER8 536 aa16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 DKC1O60832 514 aaKnown RBP eCLIP16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 GUCY1A3Q02108 690 aa16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 DHX9Q08211 1270 aaKnown RBP16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 XKR3Q5GH77 459 aa16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 TTC27Q6P3X3 843 aa16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 JAMLQ86YT9 394 aa16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 BCAS4Q8TDM0 211 aa16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 CDHR1Q96JP9 859 aa16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 IFT74Q96LB3 600 aa16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 ZDHHC18Q9NUE0 388 aa16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 GGA3Q9NZ52 723 aa16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 GTF3C4Q9UKN8 822 aa16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 DOCK1Q14185 1865 aa16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 PTPRJQ12913 1337 aa16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 SYNGAP1Q96PV0 1343 aa16.47■□□□□ 0.23
CACNA1E-208ENST00000533229 ANKRD65E5RJM6 399 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 MYO1FO00160 1098 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 KRT5P13647 590 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 NR1D1P20393 614 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 PTGIRP43119 386 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 ACOT2P49753 483 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 HIRAP54198 1017 aaPredicted RBP16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 NLRP11P59045 1033 aaKnown RBP16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 EMC2Q15006 297 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 GNPTABQ3T906 1256 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 MIS18BP1Q6P0N0 1132 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 ASAP3Q8TDY4 903 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 ZBTB45Q96K62 511 aaPredicted RBP16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 HOXC10Q9NYD6 342 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 MAFBQ9Y5Q3 323 aaPredicted RBP16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 SSC5DA1L4H1 1573 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 MYO1CO00159 1063 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 TRIM66O15016 1216 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 CTNNA2P26232 953 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 GCNT1Q02742 428 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 ACAD10Q6JQN1 1059 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 CRELD2Q6UXH1 353 aaPredicted RBP16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 APOBEC3FQ8IUX4 373 aaKnown RBP16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 TXLNGYQ9BZA5 131 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 RAB17Q9H0T7 212 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 WNT8AQ9H1J5 351 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 CENPHQ9H3R5 247 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms