RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TSPAN1O60635 241 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 TOM1L1O75674 476 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 RPLP2P05387 115 aaKnown RBP20.1■□□□□ 0.81
SMPD1-208ENST00000533123 ARF4P18085 180 aaPredicted RBP20.1■□□□□ 0.81
SMPD1-208ENST00000533123 MGAT3Q09327 533 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 PTPN14Q15678 1187 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 TSHZ1Q6ZSZ6 1077 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 CATSPER4Q7RTX7 472 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 ZBTB33Q86T24 672 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 XXYLT1Q8NBI6 393 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 CRACR2AQ9BSW2 395 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 SLC16A3O15427 465 aaKnown RBP20.1■□□□□ 0.81
SMPD1-208ENST00000533123 EPB41P11171 864 aaKnown RBP20.1■□□□□ 0.81
SMPD1-208ENST00000533123 HARSP12081 509 aaKnown RBP20.1■□□□□ 0.81
SMPD1-208ENST00000533123 GARTP22102 1010 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 KCNH2Q12809 1159 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 MYBPC2Q14324 1141 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 DCAF17Q5H9S7 520 aaPredicted RBP20.1■□□□□ 0.81
SMPD1-208ENST00000533123 ZNF618Q5T7W0 954 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 REXO1L1PQ8IX06 675 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 TMEM174Q8WUU8 243 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 CHP1Q99653 195 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 FRMD4BQ9Y2L6 1034 aa20.1■□□□□ 0.81
SMPD1-208ENST00000533123 CNTNAP2Q9UHC6 1331 aa20.09■□□□□ 0.81
SMPD1-208ENST00000533123 CD4P01730 458 aa20.09■□□□□ 0.81
SMPD1-208ENST00000533123 CKBP12277 381 aa20.09■□□□□ 0.81
SMPD1-208ENST00000533123 PSMC2P35998 433 aaKnown RBP20.09■□□□□ 0.81
SMPD1-208ENST00000533123 APBA1Q02410 837 aa20.09■□□□□ 0.81
SMPD1-208ENST00000533123 FIGNQ5HY92 759 aa20.09■□□□□ 0.81
SMPD1-208ENST00000533123 EEF1DP3Q658K8 133 aa20.09■□□□□ 0.81
SMPD1-208ENST00000533123 SLFN12LQ6IEE8 588 aa20.09■□□□□ 0.81
SMPD1-208ENST00000533123 WDR59Q6PJI9 974 aa20.09■□□□□ 0.81
SMPD1-208ENST00000533123 OSBPL7Q9BZF2 842 aa20.09■□□□□ 0.81
SMPD1-208ENST00000533123 PTPRHQ9HD43 1115 aa20.09■□□□□ 0.81
SMPD1-208ENST00000533123 NOC2LQ9Y3T9 749 aaKnown RBP20.09■□□□□ 0.81
SMPD1-208ENST00000533123 A0A0B4J269 797 aa20.08■□□□□ 0.81
SMPD1-208ENST00000533123 ZBED6P86452 979 aa20.08■□□□□ 0.81
SMPD1-208ENST00000533123 FAM186BQ8IYM0 893 aa20.08■□□□□ 0.81
SMPD1-208ENST00000533123 MSTO1Q9BUK6 570 aa20.08■□□□□ 0.81
SMPD1-208ENST00000533123 AGO2Q9UKV8 859 aaKnown RBP20.08■□□□□ 0.81
SMPD1-208ENST00000533123 TNFSF13BQ9Y275 285 aa20.08■□□□□ 0.81
SMPD1-208ENST00000533123 ABLIM1O14639 778 aa20.08■□□□□ 0.8
SMPD1-208ENST00000533123 PROZP22891 400 aa20.08■□□□□ 0.8
SMPD1-208ENST00000533123 HOXA11P31270 313 aaPredicted RBP20.08■□□□□ 0.8
SMPD1-208ENST00000533123 TRIM60Q495X7 471 aa20.08■□□□□ 0.8
SMPD1-208ENST00000533123 SEZ6Q53EL9 994 aa20.08■□□□□ 0.8
SMPD1-208ENST00000533123 CYP26C1Q6V0L0 522 aa20.08■□□□□ 0.8
SMPD1-208ENST00000533123 CBWD2Q8IUF1 395 aa20.08■□□□□ 0.8
SMPD1-208ENST00000533123 TMTC1Q8IUR5 882 aa20.08■□□□□ 0.8
SMPD1-208ENST00000533123 MYRIPQ8NFW9 859 aa20.08■□□□□ 0.8
SMPD1-208ENST00000533123 BORCS6Q96GS4 357 aa20.08■□□□□ 0.8
SMPD1-208ENST00000533123 C11orf49Q9H6J7 331 aa20.08■□□□□ 0.8
SMPD1-208ENST00000533123 A0A1W2PQJ5 194 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 ZNF568Q3ZCX4 644 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 MPZL3Q6UWV2 235 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 FAM228AQ86W67 206 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 GPIHBP1Q8IV16 184 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 ZNF592Q92610 1267 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 FAM213AQ9BRX8 229 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 PDZD7Q9H5P4 517 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 MROH7Q68CQ1 1323 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 A0A0U1RQJ8 604 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 A0A1B0GUA9 196 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 TULP1O00294 542 aaPredicted RBP20.07■□□□□ 0.8
SMPD1-208ENST00000533123 ACOT2P49753 483 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 TLE2Q04725 743 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 NCBP1Q09161 790 aaKnown RBP20.07■□□□□ 0.8
SMPD1-208ENST00000533123 SNRNP35Q16560 246 aaKnown RBP20.07■□□□□ 0.8
SMPD1-208ENST00000533123 ZBTB41Q5SVQ8 909 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 TCERG1LQ5VWI1 586 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 ANKRD33Q7Z3H0 272 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 GPD1LQ8N335 351 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 ATRIPQ8WXE1 791 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 SLC35C1Q96A29 364 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 MKNK1Q9BUB5 465 aa20.07■□□□□ 0.8
SMPD1-208ENST00000533123 LSM14BQ9BX40 385 aaKnown RBP20.07■□□□□ 0.8
SMPD1-208ENST00000533123 METTL14Q9HCE5 456 aaKnown RBP20.07■□□□□ 0.8
SMPD1-208ENST00000533123 CCP110O43303 1012 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 ZSCAN12O43309 604 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 RPS6KA5O75582 802 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 EN2P19622 333 aaPredicted RBP20.06■□□□□ 0.8
SMPD1-208ENST00000533123 MCL1Q07820 350 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 PCBP1Q15365 356 aaKnown RBP eCLIP20.06■□□□□ 0.8
SMPD1-208ENST00000533123 ACRBPQ8NEB7 543 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 FBXL18Q96ME1 805 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 AGO3Q9H9G7 860 aaKnown RBP20.06■□□□□ 0.8
SMPD1-208ENST00000533123 ADGRG1Q9Y653 693 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 NOL4O94818 638 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 AFPP02771 609 aaKnown RBP20.06■□□□□ 0.8
SMPD1-208ENST00000533123 ADRB2P07550 413 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 GHRP10912 638 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 NFX1Q12986 1120 aaKnown RBP20.06■□□□□ 0.8
SMPD1-208ENST00000533123 FAM26DQ5JW98 314 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 FBXO47Q5MNV8 452 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 TRAF7Q6Q0C0 670 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 NEK11Q8NG66 645 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 CDT1Q9H211 546 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 ST3GAL5Q9UNP4 418 aa20.06■□□□□ 0.8
SMPD1-208ENST00000533123 PIN4Q9Y237 131 aaKnown RBP20.06■□□□□ 0.8
SMPD1-208ENST00000533123 ATP11BQ9Y2G3 1177 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms