RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 FAM187BQ17R55 369 aa19.66■□□□□ 0.74
PCF11-206ENST00000533018 RNF168Q8IYW5 571 aaPredicted RBP19.66■□□□□ 0.74
PCF11-206ENST00000533018 HASPINQ8TF76 798 aa19.66■□□□□ 0.74
PCF11-206ENST00000533018 KIFC3Q9BVG8 833 aa19.66■□□□□ 0.74
PCF11-206ENST00000533018 RAB34Q9BZG1 259 aa19.66■□□□□ 0.74
PCF11-206ENST00000533018 RXFP1Q9HBX9 757 aa19.66■□□□□ 0.74
PCF11-206ENST00000533018 CASTOR2A6NHX0 329 aa19.65■□□□□ 0.74
PCF11-206ENST00000533018 ACKR2O00590 384 aa19.65■□□□□ 0.74
PCF11-206ENST00000533018 MUTP22033 750 aa19.65■□□□□ 0.74
PCF11-206ENST00000533018 PTGDRQ13258 359 aa19.65■□□□□ 0.74
PCF11-206ENST00000533018 TUSC3Q13454 348 aa19.65■□□□□ 0.74
PCF11-206ENST00000533018 HSP90AA2PQ14568 343 aaPredicted RBP19.65■□□□□ 0.74
PCF11-206ENST00000533018 ECM1Q16610 540 aa19.65■□□□□ 0.74
PCF11-206ENST00000533018 CEP57Q86XR8 500 aa19.65■□□□□ 0.74
PCF11-206ENST00000533018 SNX29Q8TEQ0 813 aa19.65■□□□□ 0.74
PCF11-206ENST00000533018 MFSD1Q9H3U5 465 aa19.65■□□□□ 0.74
PCF11-206ENST00000533018 PIDD1Q9HB75 910 aa19.65■□□□□ 0.74
PCF11-206ENST00000533018 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.65■□□□□ 0.74
PCF11-206ENST00000533018 CHST7Q9NS84 486 aa19.65■□□□□ 0.74
PCF11-206ENST00000533018 DDX19AQ9NUU7 478 aaKnown RBP19.65■□□□□ 0.74
PCF11-206ENST00000533018 GDAQ9Y2T3 454 aa19.65■□□□□ 0.74
PCF11-206ENST00000533018 RFPL2O75678 378 aa19.64■□□□□ 0.73
PCF11-206ENST00000533018 EFEMP2O95967 443 aa19.64■□□□□ 0.73
PCF11-206ENST00000533018 THP07101 528 aa19.64■□□□□ 0.73
PCF11-206ENST00000533018 RPL17P18621 184 aaKnown RBP19.64■□□□□ 0.73
PCF11-206ENST00000533018 GBP2P32456 591 aaPredicted RBP19.64■□□□□ 0.73
PCF11-206ENST00000533018 PDIA5Q14554 519 aa19.64■□□□□ 0.73
PCF11-206ENST00000533018 C4orf32Q8N8J7 132 aa19.64■□□□□ 0.73
PCF11-206ENST00000533018 SMG7Q92540 1137 aaKnown RBP19.64■□□□□ 0.73
PCF11-206ENST00000533018 KIFAP3Q92845 792 aa19.64■□□□□ 0.73
PCF11-206ENST00000533018 KIF2CQ99661 725 aa19.64■□□□□ 0.73
PCF11-206ENST00000533018 PAAF1Q9BRP4 392 aa19.64■□□□□ 0.73
PCF11-206ENST00000533018 PCDHB6Q9Y5E3 794 aa19.64■□□□□ 0.73
PCF11-206ENST00000533018 STK24Q9Y6E0 443 aa19.64■□□□□ 0.73
PCF11-206ENST00000533018 SF3B1O75533 1304 aaKnown RBP eCLIP19.64■□□□□ 0.732e-6■■□□□ 11.5
PCF11-206ENST00000533018 ZMYM2Q9UBW7 1377 aa19.64■□□□□ 0.73
PCF11-206ENST00000533018 TRIP11Q15643 1979 aa19.63■□□□□ 0.73
PCF11-206ENST00000533018 CCDC169A6NNP5 214 aa19.63■□□□□ 0.73
PCF11-206ENST00000533018 TGM5O43548 720 aa19.63■□□□□ 0.73
PCF11-206ENST00000533018 RECQL4O94761 1208 aa19.63■□□□□ 0.73
PCF11-206ENST00000533018 U2AF2P26368 475 aaKnown RBP eCLIP19.63■□□□□ 0.73
PCF11-206ENST00000533018 EFNA5P52803 228 aa19.63■□□□□ 0.73
PCF11-206ENST00000533018 CREMQ03060 361 aa19.63■□□□□ 0.73
PCF11-206ENST00000533018 TCF15Q12870 199 aa19.63■□□□□ 0.73
PCF11-206ENST00000533018 KRT79Q5XKE5 535 aa19.63■□□□□ 0.73
PCF11-206ENST00000533018 MCTP1Q6DN14 999 aa19.63■□□□□ 0.73
PCF11-206ENST00000533018 CMASQ8NFW8 434 aaPredicted RBP19.63■□□□□ 0.73
PCF11-206ENST00000533018 STAMQ92783 540 aa19.63■□□□□ 0.73
PCF11-206ENST00000533018 PHOX2BQ99453 314 aa19.63■□□□□ 0.73
PCF11-206ENST00000533018 CCDC113Q9H0I3 377 aa19.63■□□□□ 0.73
PCF11-206ENST00000533018 USP34Q70CQ2 3546 aa19.63■□□□□ 0.73
PCF11-206ENST00000533018 K7ERI5 159 aa19.62■□□□□ 0.73
PCF11-206ENST00000533018 TDGQ13569 410 aa19.62■□□□□ 0.73
PCF11-206ENST00000533018 ZRSR1Q15695 479 aaKnown RBP19.62■□□□□ 0.73
PCF11-206ENST00000533018 DCAF4L1Q3SXM0 396 aa19.62■□□□□ 0.73
PCF11-206ENST00000533018 C8orf34Q49A92 452 aa19.62■□□□□ 0.73
PCF11-206ENST00000533018 ATF7IP2Q5U623 682 aa19.62■□□□□ 0.73
PCF11-206ENST00000533018 FAM171A1Q5VUB5 890 aa19.62■□□□□ 0.73
PCF11-206ENST00000533018 EEF1DP3Q658K8 133 aa19.62■□□□□ 0.73
PCF11-206ENST00000533018 PRSS55Q6UWB4 352 aaPredicted RBP19.62■□□□□ 0.73
PCF11-206ENST00000533018 PLEKHA4Q9H4M7 779 aa19.62■□□□□ 0.73
PCF11-206ENST00000533018 KCNK12Q9HB15 430 aa19.62■□□□□ 0.73
PCF11-206ENST00000533018 WDR6Q9NNW5 1121 aaKnown RBP19.62■□□□□ 0.73
PCF11-206ENST00000533018 FNIP2Q9P278 1114 aa19.62■□□□□ 0.73
PCF11-206ENST00000533018 DNM3Q9UQ16 869 aa19.62■□□□□ 0.73
PCF11-206ENST00000533018 E9PMD0 336 aa19.61■□□□□ 0.73
PCF11-206ENST00000533018 PTGESO14684 152 aa19.61■□□□□ 0.73
PCF11-206ENST00000533018 KIF4AO95239 1232 aa19.61■□□□□ 0.73
PCF11-206ENST00000533018 EDN1P05305 212 aa19.61■□□□□ 0.73
PCF11-206ENST00000533018 TOB1P50616 345 aaPredicted RBP19.61■□□□□ 0.73
PCF11-206ENST00000533018 RTP2Q5QGT7 225 aa19.61■□□□□ 0.73
PCF11-206ENST00000533018 CYP26C1Q6V0L0 522 aa19.61■□□□□ 0.73
PCF11-206ENST00000533018 DTHD1Q6ZMT9 781 aa19.61■□□□□ 0.73
PCF11-206ENST00000533018 APBB1IPQ7Z5R6 666 aaPredicted RBP19.61■□□□□ 0.73
PCF11-206ENST00000533018 HDAC7Q8WUI4 952 aa19.61■□□□□ 0.73
PCF11-206ENST00000533018 ATOH1Q92858 354 aaPredicted RBP19.61■□□□□ 0.73
PCF11-206ENST00000533018 TTPALQ9BTX7 342 aa19.61■□□□□ 0.73
PCF11-206ENST00000533018 CXCL16Q9H2A7 254 aa19.61■□□□□ 0.73
PCF11-206ENST00000533018 FBXL21Q9UKT6 434 aa19.61■□□□□ 0.73
PCF11-206ENST00000533018 KIF3AQ9Y496 699 aa19.61■□□□□ 0.73
PCF11-206ENST00000533018 CLUHO75153 1309 aa19.6■□□□□ 0.73
PCF11-206ENST00000533018 CACNA1HO95180 2353 aa19.6■□□□□ 0.73
PCF11-206ENST00000533018 PP2D1A8MPX8 630 aa19.6■□□□□ 0.73
PCF11-206ENST00000533018 LAD1O00515 517 aa19.6■□□□□ 0.73
PCF11-206ENST00000533018 ST18O60284 1047 aa19.6■□□□□ 0.73
PCF11-206ENST00000533018 CDC25AP30304 524 aa19.6■□□□□ 0.73
PCF11-206ENST00000533018 PEX3P56589 373 aa19.6■□□□□ 0.73
PCF11-206ENST00000533018 IGSF22Q8N9C0 903 aa19.6■□□□□ 0.73
PCF11-206ENST00000533018 FLCNQ8NFG4 579 aa19.6■□□□□ 0.73
PCF11-206ENST00000533018 NT5C3AQ9H0P0 336 aa19.6■□□□□ 0.73
PCF11-206ENST00000533018 FAM86C1Q9NVL1 165 aa19.6■□□□□ 0.73
PCF11-206ENST00000533018 MYO15AQ9UKN7 3530 aa19.6■□□□□ 0.73
PCF11-206ENST00000533018 H0Y858 1186 aa19.59■□□□□ 0.73
PCF11-206ENST00000533018 RABEP1Q15276 862 aa19.59■□□□□ 0.73
PCF11-206ENST00000533018 PSMD5Q16401 504 aa19.59■□□□□ 0.73
PCF11-206ENST00000533018 GLRA4Q5JXX5 417 aa19.59■□□□□ 0.73
PCF11-206ENST00000533018 NT5DC1Q5TFE4 455 aa19.59■□□□□ 0.73
PCF11-206ENST00000533018 GPR65Q8IYL9 337 aa19.59■□□□□ 0.73
PCF11-206ENST00000533018 IRF2BPLQ9H1B7 796 aa19.59■□□□□ 0.73
PCF11-206ENST00000533018 ZDHHC7Q9NXF8 308 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms