RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 PTK2BQ14289 1009 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 MGAT5BQ3V5L5 792 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 UCMAQ8WVF2 138 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 EHD4Q9H223 541 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 ADAMTS1Q9UHI8 967 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 DIP2BQ9P265 1576 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 STRNO43815 780 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 LCP1P13796 627 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 EPHB4P54760 987 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 YWHAHQ04917 246 aaPredicted RBP11.37□□□□□ -0.59
COLCA1-203ENST00000532918 ANO4Q32M45 955 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 CCDC92Q53HC0 331 aaPredicted RBP11.37□□□□□ -0.59
COLCA1-203ENST00000532918 FRMD3A2A2Y4 597 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 FTCDO95954 541 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 ODC1P11926 461 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 SLC26A2P50443 739 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 CAV1Q03135 178 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 SLC12A1Q13621 1099 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 TTC8Q8TAM2 541 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 UHMK1Q8TAS1 419 aaKnown RBP11.37□□□□□ -0.59
COLCA1-203ENST00000532918 SNX19Q92543 992 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 YME1L1Q96TA2 773 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 C17orf75Q9HAS0 396 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 ENTPD7Q9NQZ7 604 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 ATP11BQ9Y2G3 1177 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 PPME1Q9Y570 386 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 MRFAP1Q9Y605 127 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 BCAR1P56945 870 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 HACD3Q9P035 362 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 EMSYQ7Z589 1322 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 CYP2C19P33261 490 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 TCF7P36402 384 aaPredicted RBP11.36□□□□□ -0.59
COLCA1-203ENST00000532918 TAF11Q15544 211 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 PRMT6Q96LA8 375 aaPredicted RBP11.36□□□□□ -0.59
COLCA1-203ENST00000532918 DHX35Q9H5Z1 703 aaKnown RBP11.36□□□□□ -0.59
COLCA1-203ENST00000532918 HSPBP1Q9NZL4 362 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 BFARQ9NZS9 450 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 UBQLN1Q9UMX0 589 aaKnown RBP11.36□□□□□ -0.59
COLCA1-203ENST00000532918 HEY1Q9Y5J3 304 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 IGSF9BQ9UPX0 1349 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 TPI1P60174 286 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 PRAMEP78395 509 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 TMED1Q13445 227 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 MEI1Q5TIA1 1274 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 C11orf57Q6ZUT1 292 aaPredicted RBP11.36□□□□□ -0.59
COLCA1-203ENST00000532918 CDC26Q8NHZ8 85 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 RMDN1Q96DB5 314 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 FOPNLQ96NB1 174 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 EPS15L1Q9UBC2 864 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 POLLQ9UGP5 575 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 IPPQ9Y573 584 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 PCDHB12Q9Y5F1 795 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 KRT38O76015 456 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 DDNO94850 711 aaPredicted RBP11.36□□□□□ -0.59
COLCA1-203ENST00000532918 SULT1E1P49888 294 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 ADCY1Q08828 1119 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 KCNB1Q14721 858 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 TMED2Q15363 201 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 TDRD10Q5VZ19 366 aaKnown RBP11.36□□□□□ -0.59
COLCA1-203ENST00000532918 GPT2Q8TD30 523 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 DPF2Q92785 391 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 ULK4Q96C45 1275 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 AGBL1Q96MI9 1066 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 CCSER1Q9C0I3 900 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 CPA4Q9UI42 421 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 ORC6Q9Y5N6 252 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 MYO3AQ8NEV4 1616 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 EXOC1LA0A1B0GW35 172 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 CLTAP09496 248 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 HARS2P49590 506 aaKnown RBP11.36□□□□□ -0.59
COLCA1-203ENST00000532918 LIG3P49916 1009 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 DRAP1Q14919 205 aaPredicted RBP11.36□□□□□ -0.59
COLCA1-203ENST00000532918 ATG16L1Q676U5 607 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 ZNF564Q8TBZ8 553 aaPredicted RBP11.36□□□□□ -0.59
COLCA1-203ENST00000532918 RGL1Q9NZL6 768 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 MST1RQ04912 1400 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 URODP06132 367 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 TAF6P49848 677 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 RPS6P62753 249 aaKnown RBP11.36□□□□□ -0.59
COLCA1-203ENST00000532918 NSUN2Q08J23 767 aaKnown RBP eCLIP11.36□□□□□ -0.59
COLCA1-203ENST00000532918 PKP1Q13835 747 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 ZKSCAN8Q15776 578 aaPredicted RBP11.36□□□□□ -0.59
COLCA1-203ENST00000532918 TAS2R42Q7RTR8 314 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 RHOT1Q8IXI2 618 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 TTC30BQ8N4P2 665 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 JMJD4Q9H9V9 463 aa11.36□□□□□ -0.59
COLCA1-203ENST00000532918 PDHXO00330 501 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 ASMTLO95671 621 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 CDR2Q01850 454 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 TMEM62Q0P6H9 643 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 ELAVL2Q12926 359 aaKnown RBP11.35□□□□□ -0.59
COLCA1-203ENST00000532918 FGD4Q96M96 766 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 SUN2Q9UH99 717 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 MYO1DO94832 1006 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 NUP85Q9BW27 656 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 MED4Q9NPJ6 270 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 RAG1P15918 1043 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 PRCPP42785 496 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 AP1B1Q10567 949 aa11.35□□□□□ -0.59
COLCA1-203ENST00000532918 SYNDIG1Q9H7V2 258 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms