RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 LIN9Q5TKA1 542 aa16.8■□□□□ 0.28
BRPF3-210ENST00000532538 FAM171A1Q5VUB5 890 aa16.8■□□□□ 0.28
BRPF3-210ENST00000532538 NSUN7Q8NE18 718 aaKnown RBP16.8■□□□□ 0.28
BRPF3-210ENST00000532538 DEPTORQ8TB45 409 aa16.8■□□□□ 0.28
BRPF3-210ENST00000532538 HDAC7Q8WUI4 952 aa16.8■□□□□ 0.28
BRPF3-210ENST00000532538 TNFRSF25Q93038 417 aa16.8■□□□□ 0.28
BRPF3-210ENST00000532538 PRIMPOLQ96LW4 560 aa16.8■□□□□ 0.28
BRPF3-210ENST00000532538 NACC1Q96RE7 527 aa16.8■□□□□ 0.28
BRPF3-210ENST00000532538 MYADMQ96S97 322 aa16.8■□□□□ 0.28
BRPF3-210ENST00000532538 C2orf40Q9H1Z8 148 aa16.8■□□□□ 0.28
BRPF3-210ENST00000532538 TUFT1Q9NNX1 390 aa16.8■□□□□ 0.28
BRPF3-210ENST00000532538 SNTG2Q9NY99 539 aa16.8■□□□□ 0.28
BRPF3-210ENST00000532538 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.8■□□□□ 0.28
BRPF3-210ENST00000532538 FNIP2Q9P278 1114 aa16.8■□□□□ 0.28
BRPF3-210ENST00000532538 PRR23AA6NEV1 266 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 PROB1E7EW31 1015 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 N4BP1O75113 896 aaKnown RBP16.79■□□□□ 0.28
BRPF3-210ENST00000532538 THP07101 528 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 NBL1P41271 181 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 TUSC3Q13454 348 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 ANGPT1Q15389 498 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 MAPK6Q16659 721 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 SPECC1Q5M775 1068 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 PPM1LQ5SGD2 360 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 RNF168Q8IYW5 571 aaPredicted RBP16.79■□□□□ 0.28
BRPF3-210ENST00000532538 SLC44A3Q8N4M1 653 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 DTWD2Q8NBA8 298 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 ST13P5Q8NFI4 369 aaPredicted RBP16.79■□□□□ 0.28
BRPF3-210ENST00000532538 PRKD2Q9BZL6 878 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 CHST7Q9NS84 486 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 ZDHHC7Q9NXF8 308 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 WNT16Q9UBV4 365 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 GDAQ9Y2T3 454 aa16.79■□□□□ 0.28
BRPF3-210ENST00000532538 MYH11P35749 1972 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 VWA8A3KMH1 1905 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 WNT7AO00755 349 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 PRKCBP05771 671 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 CENPBP07199 599 aaPredicted RBP16.78■□□□□ 0.28
BRPF3-210ENST00000532538 SRFP11831 508 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 NPR3P17342 541 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 FSHRP23945 695 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 ZNF174Q15697 407 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 PSMD5Q16401 504 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 CATSPER3Q86XQ3 398 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 NOSTRINQ8IVI9 506 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 CCDC105Q8IYK2 499 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 GSTCDQ8NEC7 633 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 NXPE3Q969Y0 559 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 IFT74Q96LB3 600 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 MTMR9Q96QG7 549 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 PAAF1Q9BRP4 392 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 TTPALQ9BTX7 342 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 TMEM60Q9H2L4 133 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 EPS15L1Q9UBC2 864 aa16.78■□□□□ 0.28
BRPF3-210ENST00000532538 CITO14578 2027 aa16.77■□□□□ 0.28
BRPF3-210ENST00000532538 CACNA1HO95180 2353 aa16.77■□□□□ 0.28
BRPF3-210ENST00000532538 MED24O75448 989 aa16.77■□□□□ 0.28
BRPF3-210ENST00000532538 ZMYND10O75800 440 aa16.77■□□□□ 0.28
BRPF3-210ENST00000532538 LAMP2P13473 410 aa16.77■□□□□ 0.28
BRPF3-210ENST00000532538 ELAVL2Q12926 359 aaKnown RBP16.77■□□□□ 0.28
BRPF3-210ENST00000532538 PPP2R5AQ15172 486 aa16.77■□□□□ 0.28
BRPF3-210ENST00000532538 RTP2Q5QGT7 225 aa16.77■□□□□ 0.28
BRPF3-210ENST00000532538 POTEGQ6S5H5 508 aa16.77■□□□□ 0.28
BRPF3-210ENST00000532538 PADI6Q6TGC4 694 aa16.77■□□□□ 0.28
BRPF3-210ENST00000532538 GPR152Q8TDT2 470 aa16.77■□□□□ 0.28
BRPF3-210ENST00000532538 ZNF707Q96C28 371 aaPredicted RBP16.77■□□□□ 0.28
BRPF3-210ENST00000532538 C8orf76Q96K31 380 aa16.77■□□□□ 0.28
BRPF3-210ENST00000532538 TBC1D17Q9HA65 648 aa16.77■□□□□ 0.28
BRPF3-210ENST00000532538 CCL16O15467 120 aa16.76■□□□□ 0.27
BRPF3-210ENST00000532538 EIF5BO60841 1220 aaKnown RBP16.76■□□□□ 0.27
BRPF3-210ENST00000532538 RECQL4O94761 1208 aa16.76■□□□□ 0.27
BRPF3-210ENST00000532538 KIF4AO95239 1232 aa16.76■□□□□ 0.27
BRPF3-210ENST00000532538 OR52Z1P0C646 297 aa16.76■□□□□ 0.27
BRPF3-210ENST00000532538 SPATA31C1P0DKV0 1188 aa16.76■□□□□ 0.27
BRPF3-210ENST00000532538 PPP4R3CPQ6ZMV5 832 aa16.76■□□□□ 0.27
BRPF3-210ENST00000532538 APBB1IPQ7Z5R6 666 aaPredicted RBP16.76■□□□□ 0.27
BRPF3-210ENST00000532538 GRASPQ7Z6J2 395 aaPredicted RBP16.76■□□□□ 0.27
BRPF3-210ENST00000532538 ADSSL1Q8N142 457 aa16.76■□□□□ 0.27
BRPF3-210ENST00000532538 RHOBTB2Q9BYZ6 727 aa16.76■□□□□ 0.27
BRPF3-210ENST00000532538 PDZD7Q9H5P4 517 aa16.76■□□□□ 0.27
BRPF3-210ENST00000532538 USP20Q9Y2K6 914 aa16.76■□□□□ 0.27
BRPF3-210ENST00000532538 PTPRZ1P23471 2315 aaPredicted RBP16.76■□□□□ 0.27
BRPF3-210ENST00000532538 ZMYM2Q9UBW7 1377 aa16.76■□□□□ 0.27
BRPF3-210ENST00000532538 KRBA1A5PL33 1030 aa16.75■□□□□ 0.27
BRPF3-210ENST00000532538 XYLBO75191 536 aa16.75■□□□□ 0.27
BRPF3-210ENST00000532538 EFEMP2O95967 443 aa16.75■□□□□ 0.27
BRPF3-210ENST00000532538 C8AP07357 584 aa16.75■□□□□ 0.27
BRPF3-210ENST00000532538 CCT6AP40227 531 aaKnown RBP16.75■□□□□ 0.27
BRPF3-210ENST00000532538 FAM187BQ17R55 369 aa16.75■□□□□ 0.27
BRPF3-210ENST00000532538 HAUS3Q68CZ6 603 aa16.75■□□□□ 0.27
BRPF3-210ENST00000532538 CDCA2Q69YH5 1023 aaPredicted RBP16.75■□□□□ 0.27
BRPF3-210ENST00000532538 PDXDC1Q6P996 788 aa16.75■□□□□ 0.27
BRPF3-210ENST00000532538 GPR65Q8IYL9 337 aa16.75■□□□□ 0.27
BRPF3-210ENST00000532538 SNX27Q96L92 541 aa16.75■□□□□ 0.27
BRPF3-210ENST00000532538 HINFPQ9BQA5 517 aa16.75■□□□□ 0.27
BRPF3-210ENST00000532538 POLR3CQ9BUI4 534 aaPredicted RBP16.75■□□□□ 0.27
BRPF3-210ENST00000532538 FZD8Q9H461 694 aa16.75■□□□□ 0.27
BRPF3-210ENST00000532538 POLD4Q9HCU8 107 aa16.75■□□□□ 0.27
BRPF3-210ENST00000532538 ARHGEF3Q9NR81 526 aa16.75■□□□□ 0.27
BRPF3-210ENST00000532538 NUMBLQ9Y6R0 609 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms