RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 PDGFCQ9NRA1 345 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 SNCAIPQ9Y6H5 919 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 AOC2O75106 756 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 KRT15P19012 456 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 GIT2Q14161 759 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 ENOSF1Q7L5Y1 443 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 PPP1R13BQ96KQ4 1090 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 MEIS2O14770 477 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 OGTO15294 1046 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 SKIP12755 728 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 CBWD2Q8IUF1 395 aa16.78■□□□□ 0.28
PPFIA1-222ENST00000532504 MSCO60682 206 aa16.77■□□□□ 0.28
PPFIA1-222ENST00000532504 SLITRK3O94933 977 aa16.77■□□□□ 0.28
PPFIA1-222ENST00000532504 TUBBP07437 444 aa16.77■□□□□ 0.28
PPFIA1-222ENST00000532504 IVLP07476 585 aa16.77■□□□□ 0.28
PPFIA1-222ENST00000532504 DNAJB2P25686 324 aa16.77■□□□□ 0.28
PPFIA1-222ENST00000532504 NOP14P78316 857 aaKnown RBP16.77■□□□□ 0.28
PPFIA1-222ENST00000532504 CELF3Q5SZQ8 465 aaKnown RBP16.77■□□□□ 0.28
PPFIA1-222ENST00000532504 KCTD17Q8N5Z5 321 aa16.77■□□□□ 0.28
PPFIA1-222ENST00000532504 CBWD1Q9BRT8 395 aa16.77■□□□□ 0.28
PPFIA1-222ENST00000532504 ABHD10Q9NUJ1 306 aa16.77■□□□□ 0.28
PPFIA1-222ENST00000532504 DHX40Q8IX18 779 aaKnown RBP16.77■□□□□ 0.28
PPFIA1-222ENST00000532504 SLC5A5Q92911 643 aa16.77■□□□□ 0.28
PPFIA1-222ENST00000532504 PANX2Q96RD6 677 aa16.77■□□□□ 0.28
PPFIA1-222ENST00000532504 CCL23P55773 120 aa16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 TRIP13Q15645 432 aaPredicted RBP16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 ELF2Q15723 593 aa16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 MPZL3Q6UWV2 235 aa16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 SPON2Q9BUD6 331 aa16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 COLEC11Q9BWP8 271 aa16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 ASNSD1Q9NWL6 643 aa16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 DPP3Q9NY33 737 aa16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 NKIRAS1Q9NYS0 192 aa16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 UBQLN1Q9UMX0 589 aaKnown RBP16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 POMCP01189 267 aa16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 RALAP11233 206 aa16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 RARRES1P49788 294 aa16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 GPC5P78333 572 aa16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 C10orf76Q5T2E6 689 aa16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 ABI2Q9NYB9 513 aaPredicted RBP16.77■□□□□ 0.27
PPFIA1-222ENST00000532504 GRK4P32298 578 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 SOX5P35711 763 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 CASP4P49662 377 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 TAF6P49848 677 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 ZBTB16Q05516 673 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 CFAP157Q5JU67 520 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 ARHGEF18Q6ZSZ5 1173 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 CCDC60Q8IWA6 550 aaPredicted RBP16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 HEMGNQ9BXL5 484 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 DYNC1I1O14576 645 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 SEMA3FQ13275 785 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 EDRF1Q3B7T1 1238 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 TAF2Q6P1X5 1199 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 RHOT2Q8IXI1 618 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 ENTPD7Q9NQZ7 604 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 TOPAZ1Q8N9V7 1692 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 TBKBP1A7MCY6 615 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 RECQLP46063 649 aaPredicted RBP16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 BASP1P80723 227 aaKnown RBP16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 TSTA3Q13630 321 aaPredicted RBP16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 WHAMMP3Q1A5X7 153 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 FBXL16Q8N461 479 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 L3MBTL3Q96JM7 780 aaPredicted RBP16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 BCAR1P56945 870 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 RBBP8NLQ8NC74 664 aaPredicted RBP16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 CCT6BQ92526 530 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 HEY1Q9Y5J3 304 aa16.76■□□□□ 0.27
PPFIA1-222ENST00000532504 CASTOR2A6NHX0 329 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 BUB1BO60566 1050 aaPredicted RBP16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 TOM1L1O75674 476 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 SLC9A1P19634 815 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 AKAP5P24588 427 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 PCSK1P29120 753 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 GNL1P36915 607 aaPredicted RBP16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 ST3GAL1Q11201 340 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 SLC30A5Q8TAD4 765 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 PDCD6IPQ8WUM4 868 aaKnown RBP16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 BPIFA3Q9BQP9 254 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 NUP85Q9BW27 656 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 MTMR12Q9C0I1 747 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 CCDC68Q9H2F9 335 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 APEX2Q9UBZ4 518 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 APOEP02649 317 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 ACCSLQ4AC99 568 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 ZNF384Q8TF68 577 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 HVCN1Q96D96 273 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 LMCD1Q9NZU5 365 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 ATXN8OSP0DMR3 200 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 YWHAGP61981 247 aaKnown RBP eCLIP16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 ORC1Q13415 861 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 LBX2Q6XYB7 198 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 NIPA1Q7RTP0 329 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 DCP1BQ8IZD4 617 aaKnown RBP16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 GIPC1O14908 333 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 NT5C1AQ9BXI3 368 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 BTBD7Q9P203 1132 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 NR2E3Q9Y5X4 410 aa16.75■□□□□ 0.27
PPFIA1-222ENST00000532504 EPC2Q52LR7 807 aa16.74■□□□□ 0.27
PPFIA1-222ENST00000532504 LGSNQ5TDP6 509 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms