RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 SKA1Q96BD8 255 aa12.42□□□□□ -0.42
CSRP1-215ENST00000532313 EPAS1Q99814 870 aa12.42□□□□□ -0.42
CSRP1-215ENST00000532313 RSAD1Q9HA92 442 aa12.42□□□□□ -0.42
CSRP1-215ENST00000532313 YBX3P16989 372 aaKnown RBP eCLIP12.42□□□□□ -0.42
CSRP1-215ENST00000532313 PSMA2P25787 234 aa12.42□□□□□ -0.42
CSRP1-215ENST00000532313 EDRF1Q3B7T1 1238 aa12.42□□□□□ -0.42
CSRP1-215ENST00000532313 FBXO46Q6PJ61 603 aaPredicted RBP12.42□□□□□ -0.42
CSRP1-215ENST00000532313 RASAL3Q86YV0 1011 aa12.42□□□□□ -0.42
CSRP1-215ENST00000532313 SYT2Q8N9I0 419 aaPredicted RBP12.42□□□□□ -0.42
CSRP1-215ENST00000532313 ACSF2Q96CM8 615 aaPredicted RBP12.42□□□□□ -0.42
CSRP1-215ENST00000532313 DNAJC12Q9UKB3 198 aa12.42□□□□□ -0.42
CSRP1-215ENST00000532313 SNCAIPQ9Y6H5 919 aa12.42□□□□□ -0.42
CSRP1-215ENST00000532313 SLC10A3P09131 477 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 ZFXP17010 805 aaPredicted RBP12.41□□□□□ -0.42
CSRP1-215ENST00000532313 GNA15P30679 374 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 GARSP41250 739 aaKnown RBP12.41□□□□□ -0.42
CSRP1-215ENST00000532313 NCOA4Q13772 614 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 MAGEB5Q9BZ81 275 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 MRPL17Q9NRX2 175 aaKnown RBP12.41□□□□□ -0.42
CSRP1-215ENST00000532313 LMBRD1Q9NUN5 540 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 BNIP3LO60238 219 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 IFNB1P01574 187 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 MAPTP10636 758 aaKnown RBP12.41□□□□□ -0.42
CSRP1-215ENST00000532313 ELNP15502 786 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 LAG3P18627 525 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 SSTR3P32745 418 aaPredicted RBP12.41□□□□□ -0.42
CSRP1-215ENST00000532313 AVPR1AP37288 418 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 IFNAR2P48551 515 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 ACCSLQ4AC99 568 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 CFAP157Q5JU67 520 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 PPM1LQ5SGD2 360 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 GDAP1Q8TB36 358 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 CHST12Q9NRB3 414 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 FAM8A1Q9UBU6 413 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 RAB23Q9ULC3 237 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 UQCRHLA0A096LP55 91 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 H3BRJ5 948 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 RNASEH1O60930 286 aaKnown RBP12.41□□□□□ -0.42
CSRP1-215ENST00000532313 GFPT2O94808 682 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 TUFMP49411 452 aaKnown RBP12.41□□□□□ -0.42
CSRP1-215ENST00000532313 HSD17B4P51659 736 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.41□□□□□ -0.42
CSRP1-215ENST00000532313 ARHGEF18Q6ZSZ5 1173 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 TTC13Q8NBP0 860 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 OSMRQ99650 979 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 REEP2Q9BRK0 252 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 GADD45BO75293 160 aaPredicted RBP12.41□□□□□ -0.42
CSRP1-215ENST00000532313 GNL1P36915 607 aaPredicted RBP12.41□□□□□ -0.42
CSRP1-215ENST00000532313 BEX3Q00994 111 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 TREML2Q5T2D2 321 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 C8orf74Q6P047 294 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 ELOA2Q8IYF1 753 aaPredicted RBP12.41□□□□□ -0.42
CSRP1-215ENST00000532313 PPTC7Q8NI37 304 aa12.41□□□□□ -0.42
CSRP1-215ENST00000532313 PHRF1Q9P1Y6 1649 aaKnown RBP12.4□□□□□ -0.42
CSRP1-215ENST00000532313 KRT1P04264 644 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 FAM200BP0CF97 657 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 ARP10275 920 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 ATICP31939 592 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 SNRNP35Q16560 246 aaKnown RBP12.4□□□□□ -0.42
CSRP1-215ENST00000532313 SH3D19Q5HYK7 790 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 BSPRYQ5W0U4 402 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 ZNF467Q7Z7K2 595 aaPredicted RBP12.4□□□□□ -0.42
CSRP1-215ENST00000532313 DDX53Q86TM3 631 aaKnown RBP12.4□□□□□ -0.42
CSRP1-215ENST00000532313 CSGALNACT1Q8TDX6 532 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 PPM1EQ8WY54 764 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 PPP1R2P1Q96PQ5 205 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 CCDC170Q8IYT3 715 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 DPP3Q9NY33 737 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 TBX20Q9UMR3 447 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 C2CD2LO14523 706 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 GUCY1A2P33402 732 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 OXCT1P55809 520 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 EVA1BQ9NVM1 165 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 CEP72Q9P209 647 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 FZD1Q9UP38 647 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 ZNF148Q9UQR1 794 aa12.4□□□□□ -0.42
CSRP1-215ENST00000532313 FGF19O95750 216 aa12.4□□□□□ -0.43
CSRP1-215ENST00000532313 ADH1AP07327 375 aa12.4□□□□□ -0.43
CSRP1-215ENST00000532313 PFKMP08237 780 aa12.4□□□□□ -0.43
CSRP1-215ENST00000532313 SLC11A2P49281 568 aa12.4□□□□□ -0.43
CSRP1-215ENST00000532313 NPEPPSP55786 919 aa12.4□□□□□ -0.43
CSRP1-215ENST00000532313 IFT20Q8IY31 132 aa12.4□□□□□ -0.43
CSRP1-215ENST00000532313 CNPY4Q8N129 248 aa12.4□□□□□ -0.43
CSRP1-215ENST00000532313 RBM41Q96IZ5 413 aaKnown RBP12.4□□□□□ -0.43
CSRP1-215ENST00000532313 NWD2Q9ULI1 1742 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 KRT7P08729 469 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 TCP1P17987 556 aaKnown RBP12.39□□□□□ -0.43
CSRP1-215ENST00000532313 UBA1P22314 1058 aaKnown RBP12.39□□□□□ -0.43
CSRP1-215ENST00000532313 LAMTOR4Q0VGL1 99 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 TTC23LQ6PF05 361 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 HPDLQ96IR7 371 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 CAPZA3Q96KX2 299 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 CALN1Q9BXU9 219 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 XPO4Q9C0E2 1151 aaKnown RBP12.39□□□□□ -0.43
CSRP1-215ENST00000532313 PDGFDQ9GZP0 370 aaPredicted RBP12.39□□□□□ -0.43
CSRP1-215ENST00000532313 SP110Q9HB58 689 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 Q9Y3F1 56 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 AOC2O75106 756 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 VTNP04004 478 aa12.39□□□□□ -0.43
CSRP1-215ENST00000532313 SMIM10L2AP0DMW4 78 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms