RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 A0A0U1RQF3 1178 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 ZNF233A6NK53 670 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 RAB27AP51159 221 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 FILIP1Q7Z7B0 1213 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 FAM186BQ8IYM0 893 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 HACE1Q8IYU2 909 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 SMG8Q8ND04 991 aaKnown RBP19.22■□□□□ 0.67
CTSB-222ENST00000531551 LPPQ93052 612 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 ACAP3Q96P50 834 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 RNF39Q9H2S5 420 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 KIAA1586Q9HCI6 787 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 RBAKQ9NYW8 714 aaPredicted RBP19.22■□□□□ 0.67
CTSB-222ENST00000531551 MAGEC2Q9UBF1 373 aaPredicted RBP19.22■□□□□ 0.67
CTSB-222ENST00000531551 FAM189A1O60320 539 aa19.21■□□□□ 0.67
CTSB-222ENST00000531551 ACTN1P12814 892 aa19.21■□□□□ 0.67
CTSB-222ENST00000531551 ITGA4P13612 1032 aa19.21■□□□□ 0.67
CTSB-222ENST00000531551 GRM5P41594 1212 aa19.21■□□□□ 0.67
CTSB-222ENST00000531551 TPM4P67936 248 aa19.21■□□□□ 0.67
CTSB-222ENST00000531551 CRELD2Q6UXH1 353 aaPredicted RBP19.21■□□□□ 0.67
CTSB-222ENST00000531551 ZC3H3Q8IXZ2 948 aaKnown RBP19.21■□□□□ 0.67
CTSB-222ENST00000531551 RBSNQ9H1K0 784 aa19.21■□□□□ 0.67
CTSB-222ENST00000531551 THAP9Q9H5L6 903 aa19.21■□□□□ 0.67
CTSB-222ENST00000531551 RPF1Q9H9Y2 349 aaKnown RBP19.21■□□□□ 0.67
CTSB-222ENST00000531551 C1orf112Q9NSG2 853 aa19.21■□□□□ 0.67
CTSB-222ENST00000531551 CPSF3Q9UKF6 684 aaKnown RBP19.21■□□□□ 0.67
CTSB-222ENST00000531551 ZBBXA8MT70 800 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 C9IYK1 514 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 FGBP02675 491 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 ADRB2P07550 413 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 CLTAP09496 248 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 CXCL8P10145 99 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 SKIP12755 728 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 CDK11BP21127 795 aaKnown RBP19.2■□□□□ 0.66
CTSB-222ENST00000531551 YARSP54577 528 aaKnown RBP19.2■□□□□ 0.66
CTSB-222ENST00000531551 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.2■□□□□ 0.661e-6■□□□□ 9
CTSB-222ENST00000531551 ZNF365Q70YC5 407 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 C16orf59Q7L2K0 433 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 ECHDC2Q86YB7 292 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 TMEM174Q8WUU8 243 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 CNOT6LQ96LI5 555 aaKnown RBP19.2■□□□□ 0.66
CTSB-222ENST00000531551 TRAIPQ9BWF2 469 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 KLK14Q9P0G3 267 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.2■□□□□ 0.66
CTSB-222ENST00000531551 MEIS3P2A8K0S8 358 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 EPHB4P54760 987 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 KYAT1Q16773 422 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 FAM114A1Q8IWE2 563 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 CCDC127Q96BQ5 260 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 PGBD4Q96DM1 585 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 FBXL18Q96ME1 805 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 LRFN2Q9ULH4 789 aa19.2■□□□□ 0.66
CTSB-222ENST00000531551 ABHD14A-ACY1A0A1B0GW23 586 aa19.19■□□□□ 0.66
CTSB-222ENST00000531551 SLC16A3O15427 465 aaKnown RBP19.19■□□□□ 0.66
CTSB-222ENST00000531551 RECQL4O94761 1208 aa19.19■□□□□ 0.66
CTSB-222ENST00000531551 GNA14O95837 355 aa19.19■□□□□ 0.66
CTSB-222ENST00000531551 KRT13P13646 458 aa19.19■□□□□ 0.66
CTSB-222ENST00000531551 HSP90AA2PQ14568 343 aaPredicted RBP19.19■□□□□ 0.66
CTSB-222ENST00000531551 ENOX2Q16206 610 aaKnown RBP19.19■□□□□ 0.66
CTSB-222ENST00000531551 MKNK1Q9BUB5 465 aa19.19■□□□□ 0.66
CTSB-222ENST00000531551 ARMCX3Q9UH62 379 aaPredicted RBP19.19■□□□□ 0.66
CTSB-222ENST00000531551 PCDHB7Q9Y5E2 793 aa19.19■□□□□ 0.66
CTSB-222ENST00000531551 KCNJ18B7U540 433 aa19.18■□□□□ 0.66
CTSB-222ENST00000531551 ZNF623O75123 536 aa19.18■□□□□ 0.66
CTSB-222ENST00000531551 UPP2O95045 317 aa19.18■□□□□ 0.66
CTSB-222ENST00000531551 MTIF2P46199 727 aaKnown RBP19.18■□□□□ 0.66
CTSB-222ENST00000531551 KCNJ12Q14500 433 aa19.18■□□□□ 0.66
CTSB-222ENST00000531551 DCAF17Q5H9S7 520 aaPredicted RBP19.18■□□□□ 0.66
CTSB-222ENST00000531551 TCERG1LQ5VWI1 586 aa19.18■□□□□ 0.66
CTSB-222ENST00000531551 PSRC1Q6PGN9 363 aaPredicted RBP19.18■□□□□ 0.66
CTSB-222ENST00000531551 IRF2BP1Q8IU81 584 aa19.18■□□□□ 0.66
CTSB-222ENST00000531551 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.18■□□□□ 0.661e-7■■■■■ 39.4
CTSB-222ENST00000531551 RNF19AQ9NV58 838 aa19.18■□□□□ 0.66
CTSB-222ENST00000531551 DLATP10515 647 aaKnown RBP19.18■□□□□ 0.66
CTSB-222ENST00000531551 ATF7P17544 494 aaPredicted RBP19.18■□□□□ 0.66
CTSB-222ENST00000531551 PPP2R3AQ06190 1150 aa19.18■□□□□ 0.66
CTSB-222ENST00000531551 SPAG1Q07617 926 aa19.18■□□□□ 0.66
CTSB-222ENST00000531551 CYP24A1Q07973 514 aa19.18■□□□□ 0.66
CTSB-222ENST00000531551 MRPL10Q7Z7H8 261 aaKnown RBP19.18■□□□□ 0.66
CTSB-222ENST00000531551 BRSK2Q8IWQ3 736 aa19.18■□□□□ 0.66
CTSB-222ENST00000531551 TET1Q8NFU7 2136 aa19.18■□□□□ 0.66
CTSB-222ENST00000531551 FNBP1Q96RU3 617 aa19.18■□□□□ 0.66
CTSB-222ENST00000531551 PDE11AQ9HCR9 933 aa19.18■□□□□ 0.66
CTSB-222ENST00000531551 TOPORSQ9NS56 1045 aaPredicted RBP19.18■□□□□ 0.66
CTSB-222ENST00000531551 ATP1A3P13637 1013 aa19.17■□□□□ 0.66
CTSB-222ENST00000531551 MAGEA10P43363 369 aaPredicted RBP19.17■□□□□ 0.66
CTSB-222ENST00000531551 KCNJ6P48051 423 aa19.17■□□□□ 0.66
CTSB-222ENST00000531551 FAM189BP81408 668 aa19.17■□□□□ 0.66
CTSB-222ENST00000531551 SLC10A6Q3KNW5 377 aa19.17■□□□□ 0.66
CTSB-222ENST00000531551 TCP11X2Q5H9J9 407 aa19.17■□□□□ 0.66
CTSB-222ENST00000531551 TMEM240Q5SV17 173 aa19.17■□□□□ 0.66
CTSB-222ENST00000531551 CDKAL1Q5VV42 579 aa19.17■□□□□ 0.66
CTSB-222ENST00000531551 AGMOQ6ZNB7 445 aa19.17■□□□□ 0.66
CTSB-222ENST00000531551 FAM43BQ6ZT52 329 aaPredicted RBP19.17■□□□□ 0.66
CTSB-222ENST00000531551 INTS8Q75QN2 995 aaKnown RBP19.17■□□□□ 0.66
CTSB-222ENST00000531551 FRMD5Q7Z6J6 570 aa19.17■□□□□ 0.66
CTSB-222ENST00000531551 HSD3B7Q9H2F3 369 aa19.17■□□□□ 0.66
CTSB-222ENST00000531551 MMRN2Q9H8L6 949 aa19.17■□□□□ 0.66
CTSB-222ENST00000531551 RSAD1Q9HA92 442 aa19.17■□□□□ 0.66
CTSB-222ENST00000531551 METTL14Q9HCE5 456 aaKnown RBP19.17■□□□□ 0.66
CTSB-222ENST00000531551 LACTBL1A8MY62 500 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms