RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 NHLH1Q02575 133 aa24.56■■□□□ 1.52
TRAPPC4-210ENST00000531290 TUSC3Q13454 348 aa24.56■■□□□ 1.52
TRAPPC4-210ENST00000531290 HSP90AA2PQ14568 343 aaPredicted RBP24.56■■□□□ 1.52
TRAPPC4-210ENST00000531290 DTHD1Q6ZMT9 781 aa24.56■■□□□ 1.52
TRAPPC4-210ENST00000531290 GPR65Q8IYL9 337 aa24.56■■□□□ 1.52
TRAPPC4-210ENST00000531290 CMASQ8NFW8 434 aaPredicted RBP24.56■■□□□ 1.52
TRAPPC4-210ENST00000531290 RIN2Q8WYP3 895 aaPredicted RBP24.56■■□□□ 1.52
TRAPPC4-210ENST00000531290 B3GALT6Q96L58 329 aa24.56■■□□□ 1.52
TRAPPC4-210ENST00000531290 KIFC3Q9BVG8 833 aa24.56■■□□□ 1.52
TRAPPC4-210ENST00000531290 CCDC195A0A1B0GUA6 201 aa24.55■■□□□ 1.52
TRAPPC4-210ENST00000531290 RECQL4O94761 1208 aa24.55■■□□□ 1.52
TRAPPC4-210ENST00000531290 BRD1O95696 1058 aa24.55■■□□□ 1.52
TRAPPC4-210ENST00000531290 ASGR2P07307 311 aa24.55■■□□□ 1.52
TRAPPC4-210ENST00000531290 CREMQ03060 361 aa24.55■■□□□ 1.52
TRAPPC4-210ENST00000531290 IER5LQ5T953 404 aa24.55■■□□□ 1.52
TRAPPC4-210ENST00000531290 CYP26C1Q6V0L0 522 aa24.55■■□□□ 1.52
TRAPPC4-210ENST00000531290 APBB1IPQ7Z5R6 666 aaPredicted RBP24.55■■□□□ 1.52
TRAPPC4-210ENST00000531290 ALYREFQ86V81 257 aaKnown RBP24.55■■□□□ 1.52
TRAPPC4-210ENST00000531290 PALB2Q86YC2 1186 aa24.55■■□□□ 1.52
TRAPPC4-210ENST00000531290 SF3B1O75533 1304 aaKnown RBP eCLIP24.55■■□□□ 1.523e-6■■■■■ 137.9
TRAPPC4-210ENST00000531290 CASTOR2A6NHX0 329 aa24.54■■□□□ 1.52
TRAPPC4-210ENST00000531290 K7ERI5 159 aa24.54■■□□□ 1.52
TRAPPC4-210ENST00000531290 C1RP00736 705 aa24.54■■□□□ 1.52
TRAPPC4-210ENST00000531290 MYBP10242 640 aa24.54■■□□□ 1.52
TRAPPC4-210ENST00000531290 DCAF4L1Q3SXM0 396 aa24.54■■□□□ 1.52
TRAPPC4-210ENST00000531290 FEZF2Q8TBJ5 459 aa24.54■■□□□ 1.52
TRAPPC4-210ENST00000531290 HDAC7Q8WUI4 952 aa24.54■■□□□ 1.52
TRAPPC4-210ENST00000531290 PLEKHA4Q9H4M7 779 aa24.54■■□□□ 1.52
TRAPPC4-210ENST00000531290 FNIP2Q9P278 1114 aa24.54■■□□□ 1.52
TRAPPC4-210ENST00000531290 GDAQ9Y2T3 454 aa24.54■■□□□ 1.52
TRAPPC4-210ENST00000531290 TECTAO75443 2155 aa24.54■■□□□ 1.52
TRAPPC4-210ENST00000531290 MUC6Q6W4X9 2439 aa24.53■■□□□ 1.52
TRAPPC4-210ENST00000531290 CCDC169A6NNP5 214 aa24.53■■□□□ 1.52
TRAPPC4-210ENST00000531290 SPATA31D3P0C874 917 aa24.53■■□□□ 1.52
TRAPPC4-210ENST00000531290 PRPHP41219 470 aa24.53■■□□□ 1.52
TRAPPC4-210ENST00000531290 ATF7IP2Q5U623 682 aa24.53■■□□□ 1.52
TRAPPC4-210ENST00000531290 EEF1DP3Q658K8 133 aa24.53■■□□□ 1.52
TRAPPC4-210ENST00000531290 SPATA31D4Q6ZUB0 917 aa24.53■■□□□ 1.52
TRAPPC4-210ENST00000531290 PAAF1Q9BRP4 392 aa24.53■■□□□ 1.52
TRAPPC4-210ENST00000531290 CACNG4Q9UBN1 327 aa24.53■■□□□ 1.52
TRAPPC4-210ENST00000531290 ARID2Q68CP9 1835 aa24.52■■□□□ 1.52
TRAPPC4-210ENST00000531290 PP2D1A8MPX8 630 aa24.52■■□□□ 1.52
TRAPPC4-210ENST00000531290 E9PMD0 336 aa24.52■■□□□ 1.52
TRAPPC4-210ENST00000531290 H3BQV1 296 aa24.52■■□□□ 1.52
TRAPPC4-210ENST00000531290 PTGESO14684 152 aa24.52■■□□□ 1.52
TRAPPC4-210ENST00000531290 AVPR2P30518 371 aa24.52■■□□□ 1.52
TRAPPC4-210ENST00000531290 PTPN5P54829 565 aa24.52■■□□□ 1.52
TRAPPC4-210ENST00000531290 PEX3P56589 373 aa24.52■■□□□ 1.52
TRAPPC4-210ENST00000531290 RILPL1Q5EBL4 403 aa24.52■■□□□ 1.52
TRAPPC4-210ENST00000531290 NT5DC1Q5TFE4 455 aa24.52■■□□□ 1.52
TRAPPC4-210ENST00000531290 GLYCTKQ8IVS8 523 aa24.52■■□□□ 1.52
TRAPPC4-210ENST00000531290 HASPINQ8TF76 798 aa24.52■■□□□ 1.52
TRAPPC4-210ENST00000531290 STAMQ92783 540 aa24.52■■□□□ 1.52
TRAPPC4-210ENST00000531290 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.52■■□□□ 1.52
TRAPPC4-210ENST00000531290 TGM5O43548 720 aa24.51■■□□□ 1.51
TRAPPC4-210ENST00000531290 RFPL2O75678 378 aa24.51■■□□□ 1.51
TRAPPC4-210ENST00000531290 EDN1P05305 212 aa24.51■■□□□ 1.51
TRAPPC4-210ENST00000531290 CDC25AP30304 524 aa24.51■■□□□ 1.51
TRAPPC4-210ENST00000531290 ZRSR1Q15695 479 aaKnown RBP24.51■■□□□ 1.51
TRAPPC4-210ENST00000531290 IL17AQ16552 155 aa24.51■■□□□ 1.51
TRAPPC4-210ENST00000531290 FAM171A1Q5VUB5 890 aa24.51■■□□□ 1.51
TRAPPC4-210ENST00000531290 CEP57Q86XR8 500 aa24.51■■□□□ 1.51
TRAPPC4-210ENST00000531290 SMG7Q92540 1137 aaKnown RBP24.51■■□□□ 1.51
TRAPPC4-210ENST00000531290 TMX3Q96JJ7 454 aa24.51■■□□□ 1.51
TRAPPC4-210ENST00000531290 TTPALQ9BTX7 342 aa24.51■■□□□ 1.51
TRAPPC4-210ENST00000531290 RHOBTB2Q9BYZ6 727 aa24.51■■□□□ 1.51
TRAPPC4-210ENST00000531290 PIDD1Q9HB75 910 aa24.51■■□□□ 1.51
TRAPPC4-210ENST00000531290 KIF4AO95239 1232 aa24.5■■□□□ 1.51
TRAPPC4-210ENST00000531290 RPL17P18621 184 aaKnown RBP24.5■■□□□ 1.51
TRAPPC4-210ENST00000531290 NPTX2P47972 431 aa24.5■■□□□ 1.51
TRAPPC4-210ENST00000531290 VCPP55072 806 aaKnown RBP24.5■■□□□ 1.51
TRAPPC4-210ENST00000531290 ELAVL2Q12926 359 aaKnown RBP24.5■■□□□ 1.51
TRAPPC4-210ENST00000531290 DMP1Q13316 513 aaPredicted RBP24.5■■□□□ 1.51
TRAPPC4-210ENST00000531290 PRSS33Q8NF86 280 aa24.5■■□□□ 1.51
TRAPPC4-210ENST00000531290 DRC1Q96MC2 740 aa24.5■■□□□ 1.51
TRAPPC4-210ENST00000531290 SMOC2Q9H3U7 446 aa24.5■■□□□ 1.51
TRAPPC4-210ENST00000531290 WDR6Q9NNW5 1121 aaKnown RBP24.5■■□□□ 1.51
TRAPPC4-210ENST00000531290 TNFSF13BQ9Y275 285 aa24.5■■□□□ 1.51
TRAPPC4-210ENST00000531290 HIP1RO75146 1068 aa24.49■■□□□ 1.51
TRAPPC4-210ENST00000531290 PDGFBP01127 241 aaPredicted RBP24.49■■□□□ 1.51
TRAPPC4-210ENST00000531290 RTP2Q5QGT7 225 aa24.49■■□□□ 1.51
TRAPPC4-210ENST00000531290 LILRA6Q6PI73 481 aa24.49■■□□□ 1.51
TRAPPC4-210ENST00000531290 PRSS55Q6UWB4 352 aaPredicted RBP24.49■■□□□ 1.51
TRAPPC4-210ENST00000531290 NT5C3AQ9H0P0 336 aa24.49■■□□□ 1.51
TRAPPC4-210ENST00000531290 CXCL16Q9H2A7 254 aa24.49■■□□□ 1.51
TRAPPC4-210ENST00000531290 TMEM134Q9H6X4 195 aa24.49■■□□□ 1.51
TRAPPC4-210ENST00000531290 KMT5AQ9NQR1 393 aa24.49■■□□□ 1.51
TRAPPC4-210ENST00000531290 ZDHHC7Q9NXF8 308 aa24.49■■□□□ 1.51
TRAPPC4-210ENST00000531290 RBM19Q9Y4C8 960 aaKnown RBP24.49■■□□□ 1.51
TRAPPC4-210ENST00000531290 PHLPP2Q6ZVD8 1323 aa24.49■■□□□ 1.51
TRAPPC4-210ENST00000531290 GJB2P29033 226 aa24.48■■□□□ 1.51
TRAPPC4-210ENST00000531290 GBP2P32456 591 aaPredicted RBP24.48■■□□□ 1.51
TRAPPC4-210ENST00000531290 MRE11P49959 708 aa24.48■■□□□ 1.51
TRAPPC4-210ENST00000531290 YARSP54577 528 aaKnown RBP24.48■■□□□ 1.51
TRAPPC4-210ENST00000531290 TDGQ13569 410 aa24.48■■□□□ 1.51
TRAPPC4-210ENST00000531290 NAB2Q15742 525 aa24.48■■□□□ 1.51
TRAPPC4-210ENST00000531290 RINT1Q6NUQ1 792 aa24.48■■□□□ 1.51
TRAPPC4-210ENST00000531290 PDXDC1Q6P996 788 aa24.48■■□□□ 1.51
TRAPPC4-210ENST00000531290 RUSC1Q9BVN2 902 aa24.48■■□□□ 1.51
TRAPPC4-210ENST00000531290 MRPL4Q9BYD3 311 aaKnown RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms