RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 NPHP3Q7Z494 1330 aa9.43□□□□□ -0.9
CSDE1-213ENST00000530784 FSBPO95073 299 aa9.43□□□□□ -0.9
CSDE1-213ENST00000530784 PUM1Q14671 1186 aaKnown RBP eCLIP9.43□□□□□ -0.9
CSDE1-213ENST00000530784 CCDC62Q6P9F0 684 aa9.43□□□□□ -0.9
CSDE1-213ENST00000530784 ADGRE4PQ86SQ3 457 aa9.43□□□□□ -0.9
CSDE1-213ENST00000530784 LYSMD2Q8IV50 215 aa9.43□□□□□ -0.9
CSDE1-213ENST00000530784 PPP1R14CQ8TAE6 165 aa9.43□□□□□ -0.9
CSDE1-213ENST00000530784 GAB3Q8WWW8 586 aa9.43□□□□□ -0.9
CSDE1-213ENST00000530784 PRDM12Q9H4Q4 367 aa9.43□□□□□ -0.9
CSDE1-213ENST00000530784 TOPORSQ9NS56 1045 aaPredicted RBP9.43□□□□□ -0.9
CSDE1-213ENST00000530784 NUMBLQ9Y6R0 609 aa9.43□□□□□ -0.9
CSDE1-213ENST00000530784 ADGRF5Q8IZF2 1346 aa9.42□□□□□ -0.9
CSDE1-213ENST00000530784 ULK1O75385 1050 aa9.42□□□□□ -0.9
CSDE1-213ENST00000530784 VSIG10L2P0DP72 767 aa9.42□□□□□ -0.9
CSDE1-213ENST00000530784 GAAP10253 952 aa9.42□□□□□ -0.9
CSDE1-213ENST00000530784 CNGA1P29973 690 aa9.42□□□□□ -0.9
CSDE1-213ENST00000530784 SESN3P58005 492 aa9.42□□□□□ -0.9
CSDE1-213ENST00000530784 CD69Q07108 199 aa9.42□□□□□ -0.9
CSDE1-213ENST00000530784 GAGE13Q4V321 117 aa9.42□□□□□ -0.9
CSDE1-213ENST00000530784 KRT40Q6A162 431 aa9.42□□□□□ -0.9
CSDE1-213ENST00000530784 MAMDC4Q6UXC1 1216 aa9.42□□□□□ -0.9
CSDE1-213ENST00000530784 SPRED1Q7Z699 444 aa9.42□□□□□ -0.9
CSDE1-213ENST00000530784 SH3RF3Q8TEJ3 882 aaPredicted RBP9.42□□□□□ -0.9
CSDE1-213ENST00000530784 EDAQ92838 391 aa9.42□□□□□ -0.9
CSDE1-213ENST00000530784 BORCS6Q96GS4 357 aa9.42□□□□□ -0.9
CSDE1-213ENST00000530784 UIMC1Q96RL1 719 aa9.42□□□□□ -0.9
CSDE1-213ENST00000530784 FDXACB1Q9BRP7 624 aaPredicted RBP9.42□□□□□ -0.9
CSDE1-213ENST00000530784 C14orf93Q9H972 538 aaKnown RBP9.42□□□□□ -0.9
CSDE1-213ENST00000530784 TESMINQ9Y4I5 508 aa9.42□□□□□ -0.9
CSDE1-213ENST00000530784 MYOM2P54296 1465 aa9.41□□□□□ -0.9
CSDE1-213ENST00000530784 PXDNQ92626 1479 aa9.41□□□□□ -0.9
CSDE1-213ENST00000530784 PIK3C2GO75747 1445 aa9.41□□□□□ -0.9
CSDE1-213ENST00000530784 LRPPRCP42704 1394 aaKnown RBP9.41□□□□□ -0.9
CSDE1-213ENST00000530784 BRINP1O60477 761 aa9.41□□□□□ -0.9
CSDE1-213ENST00000530784 EYA4O95677 639 aa9.41□□□□□ -0.9
CSDE1-213ENST00000530784 KIR2DL3P43628 341 aa9.41□□□□□ -0.9
CSDE1-213ENST00000530784 TRIM25Q14258 630 aaKnown RBP9.41□□□□□ -0.9
CSDE1-213ENST00000530784 STAT4Q14765 748 aa9.41□□□□□ -0.9
CSDE1-213ENST00000530784 PRKD1Q15139 912 aaPredicted RBP9.41□□□□□ -0.9
CSDE1-213ENST00000530784 SPDYAQ5MJ70 313 aa9.41□□□□□ -0.9
CSDE1-213ENST00000530784 LHFPL2Q6ZUX7 228 aa9.41□□□□□ -0.9
CSDE1-213ENST00000530784 GAREM2Q75VX8 874 aa9.41□□□□□ -0.9
CSDE1-213ENST00000530784 ZNF808Q8N4W9 903 aaPredicted RBP9.41□□□□□ -0.9
CSDE1-213ENST00000530784 PIK3C3Q8NEB9 887 aa9.41□□□□□ -0.9
CSDE1-213ENST00000530784 WNT8AQ9H1J5 351 aa9.41□□□□□ -0.9
CSDE1-213ENST00000530784 STK26Q9P289 416 aa9.41□□□□□ -0.9
CSDE1-213ENST00000530784 TRPC5Q9UL62 973 aaPredicted RBP9.41□□□□□ -0.9
CSDE1-213ENST00000530784 PRKAB1Q9Y478 270 aa9.41□□□□□ -0.9
CSDE1-213ENST00000530784 KNDC1Q76NI1 1749 aa9.4□□□□□ -0.9
CSDE1-213ENST00000530784 IFT172Q9UG01 1749 aa9.4□□□□□ -0.9
CSDE1-213ENST00000530784 UBE2QL1A1L167 161 aa9.4□□□□□ -0.9
CSDE1-213ENST00000530784 SEC24DO94855 1032 aaPredicted RBP9.4□□□□□ -0.9
CSDE1-213ENST00000530784 JUNP05412 331 aaKnown RBP9.4□□□□□ -0.9
CSDE1-213ENST00000530784 PPARAQ07869 468 aa9.4□□□□□ -0.9
CSDE1-213ENST00000530784 CT83Q5H943 113 aa9.4□□□□□ -0.9
CSDE1-213ENST00000530784 PITRM1Q5JRX3 1037 aa9.4□□□□□ -0.9
CSDE1-213ENST00000530784 D2HGDHQ8N465 521 aa9.4□□□□□ -0.9
CSDE1-213ENST00000530784 FAM89AQ96GI7 184 aa9.4□□□□□ -0.9
CSDE1-213ENST00000530784 MPHOSPH9Q99550 1183 aa9.4□□□□□ -0.9
CSDE1-213ENST00000530784 IL23AQ9NPF7 189 aa9.4□□□□□ -0.9
CSDE1-213ENST00000530784 PRSS50Q9UI38 385 aa9.4□□□□□ -0.9
CSDE1-213ENST00000530784 ABCC11Q96J66 1382 aa9.39□□□□□ -0.91
CSDE1-213ENST00000530784 LY86O95711 162 aa9.39□□□□□ -0.91
CSDE1-213ENST00000530784 LPLP06858 475 aa9.39□□□□□ -0.91
CSDE1-213ENST00000530784 GPR15P49685 360 aa9.39□□□□□ -0.91
CSDE1-213ENST00000530784 SLC41A1Q8IVJ1 513 aa9.39□□□□□ -0.91
CSDE1-213ENST00000530784 FAM126AQ9BYI3 521 aaPredicted RBP9.39□□□□□ -0.91
CSDE1-213ENST00000530784 VTA1Q9NP79 307 aa9.39□□□□□ -0.91
CSDE1-213ENST00000530784 ING3Q9NXR8 418 aa9.39□□□□□ -0.91
CSDE1-213ENST00000530784 NCDNQ9UBB6 729 aa9.39□□□□□ -0.91
CSDE1-213ENST00000530784 SH3BP1Q9Y3L3 701 aa9.39□□□□□ -0.91
CSDE1-213ENST00000530784 ATRNO75882 1429 aa9.39□□□□□ -0.91
CSDE1-213ENST00000530784 YTHDC2Q9H6S0 1430 aaKnown RBP9.39□□□□□ -0.91
CSDE1-213ENST00000530784 PLEKHH1Q9ULM0 1364 aa9.38□□□□□ -0.91
CSDE1-213ENST00000530784 XPAP23025 273 aaPredicted RBP9.38□□□□□ -0.91
CSDE1-213ENST00000530784 TMPRSS15P98073 1019 aa9.38□□□□□ -0.91
CSDE1-213ENST00000530784 CMIPQ8IY22 773 aa9.38□□□□□ -0.91
CSDE1-213ENST00000530784 UNC5BQ8IZJ1 945 aa9.38□□□□□ -0.91
CSDE1-213ENST00000530784 EAF2Q96CJ1 260 aaPredicted RBP9.38□□□□□ -0.91
CSDE1-213ENST00000530784 EVLQ9UI08 416 aaPredicted RBP9.38□□□□□ -0.91
CSDE1-213ENST00000530784 RCAN3Q9UKA8 241 aa9.38□□□□□ -0.91
CSDE1-213ENST00000530784 KIF1AQ12756 1690 aa9.38□□□□□ -0.91
CSDE1-213ENST00000530784 FMN2Q9NZ56 1722 aa9.37□□□□□ -0.91
CSDE1-213ENST00000530784 MATN3O15232 486 aa9.37□□□□□ -0.91
CSDE1-213ENST00000530784 NRP2O60462 931 aa9.37□□□□□ -0.91
CSDE1-213ENST00000530784 POU3F3P20264 500 aaPredicted RBP9.37□□□□□ -0.91
CSDE1-213ENST00000530784 CCDC178Q5BJE1 867 aa9.37□□□□□ -0.91
CSDE1-213ENST00000530784 FAM111BQ6SJ93 734 aa9.37□□□□□ -0.91
CSDE1-213ENST00000530784 SGMS1Q86VZ5 419 aa9.37□□□□□ -0.91
CSDE1-213ENST00000530784 TCF25Q9BQ70 676 aa9.37□□□□□ -0.91
CSDE1-213ENST00000530784 KCTD10Q9H3F6 313 aa9.37□□□□□ -0.91
CSDE1-213ENST00000530784 TLR9Q9NR96 1032 aa9.37□□□□□ -0.91
CSDE1-213ENST00000530784 BCL9LQ86UU0 1499 aa9.36□□□□□ -0.91
CSDE1-213ENST00000530784 MTSS1O43312 755 aa9.36□□□□□ -0.91
CSDE1-213ENST00000530784 ALDH1A2O94788 518 aa9.36□□□□□ -0.91
CSDE1-213ENST00000530784 CPEP16870 476 aa9.36□□□□□ -0.91
CSDE1-213ENST00000530784 TNFRSF1AP19438 455 aa9.36□□□□□ -0.91
CSDE1-213ENST00000530784 LGALS4P56470 323 aa9.36□□□□□ -0.91
CSDE1-213ENST00000530784 HHEXQ03014 270 aa9.36□□□□□ -0.91
CSDE1-213ENST00000530784 MGAT5Q09328 741 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms