RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 PPP2R3CQ969Q6 453 aa18.48■□□□□ 0.55
SF3B2-209ENST00000530322 DHX58Q96C10 678 aa18.48■□□□□ 0.55
SF3B2-209ENST00000530322 TCHPQ9BT92 498 aa18.48■□□□□ 0.55
SF3B2-209ENST00000530322 VN1R3Q9BXE9 311 aa18.48■□□□□ 0.55
SF3B2-209ENST00000530322 CUEDC2Q9H467 287 aa18.48■□□□□ 0.55
SF3B2-209ENST00000530322 ST6GALNAC4Q9H4F1 302 aa18.48■□□□□ 0.55
SF3B2-209ENST00000530322 KBTBD4Q9NVX7 518 aa18.48■□□□□ 0.55
SF3B2-209ENST00000530322 TBX20Q9UMR3 447 aa18.48■□□□□ 0.55
SF3B2-209ENST00000530322 SPTBN5Q9NRC6 3674 aaKnown RBP18.47■□□□□ 0.55
SF3B2-209ENST00000530322 PIGRP01833 764 aa18.47■□□□□ 0.55
SF3B2-209ENST00000530322 OR1G1P47890 313 aa18.47■□□□□ 0.55
SF3B2-209ENST00000530322 AAK1Q2M2I8 961 aa18.47■□□□□ 0.55
SF3B2-209ENST00000530322 PLPP4Q5VZY2 271 aa18.47■□□□□ 0.55
SF3B2-209ENST00000530322 TMC7Q7Z402 723 aa18.47■□□□□ 0.55
SF3B2-209ENST00000530322 VPS52Q8N1B4 723 aa18.47■□□□□ 0.55
SF3B2-209ENST00000530322 IQUBQ8NA54 791 aa18.47■□□□□ 0.55
SF3B2-209ENST00000530322 SPATA32Q96LK8 384 aa18.47■□□□□ 0.55
SF3B2-209ENST00000530322 TNMDQ9H2S6 317 aa18.47■□□□□ 0.55
SF3B2-209ENST00000530322 IGFLR1Q9H665 355 aa18.47■□□□□ 0.55
SF3B2-209ENST00000530322 NGRNQ9NPE2 291 aaKnown RBP18.47■□□□□ 0.55
SF3B2-209ENST00000530322 ENTPD7Q9NQZ7 604 aa18.47■□□□□ 0.55
SF3B2-209ENST00000530322 MARCH5Q9NX47 278 aa18.47■□□□□ 0.55
SF3B2-209ENST00000530322 SEL1LQ9UBV2 794 aa18.47■□□□□ 0.55
SF3B2-209ENST00000530322 ATP6V1DQ9Y5K8 247 aa18.47■□□□□ 0.55
SF3B2-209ENST00000530322 FRMD3A2A2Y4 597 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 GAP43P17677 238 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 ABCD1P33897 745 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 NRIP1P48552 1158 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 MCL1Q07820 350 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 NOLC1Q14978 699 aaKnown RBP eCLIP18.46■□□□□ 0.55
SF3B2-209ENST00000530322 NAB2Q15742 525 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 ZC2HC1CQ53FD0 456 aaPredicted RBP18.46■□□□□ 0.55
SF3B2-209ENST00000530322 TJAP1Q5JTD0 557 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 ZNF720Q7Z2F6 126 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 RBM23Q86U06 439 aaKnown RBP18.46■□□□□ 0.55
SF3B2-209ENST00000530322 MAP4K3Q8IVH8 894 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 STAMQ92783 540 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 BICD1Q96G01 975 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 CCDC94Q9BW85 323 aaPredicted RBP18.46■□□□□ 0.55
SF3B2-209ENST00000530322 HAPLN2Q9GZV7 340 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 ZBP1Q9H171 429 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 TLE6Q9H808 572 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 CLDND1Q9NY35 253 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 FAM13BQ9NYF5 915 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 ANKFY1Q9P2R3 1169 aa18.46■□□□□ 0.55
SF3B2-209ENST00000530322 PRG3Q9Y2Y8 225 aaPredicted RBP18.46■□□□□ 0.55
SF3B2-209ENST00000530322 HIDE1A8MVS5 230 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 PER2O15055 1255 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 POLR2DO15514 142 aaKnown RBP18.45■□□□□ 0.54
SF3B2-209ENST00000530322 LINC01565O15544 149 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 CLDN3O15551 220 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 PPP1R37O75864 691 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 EFEMP2O95967 443 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 THP07101 528 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 KCNA5P22460 613 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 LTBRP36941 435 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 KCNQ1P51787 676 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 OSTNP61366 133 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 ADAM15Q13444 863 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 TUSC3Q13454 348 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 SMC1AQ14683 1233 aaKnown RBP18.45■□□□□ 0.54
SF3B2-209ENST00000530322 DUSP6Q16828 381 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 XKR4Q5GH76 650 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 ALKAL1Q6UXT8 129 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 EFHBQ8N7U6 833 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 MRPL43Q8N983 215 aaKnown RBP18.45■□□□□ 0.54
SF3B2-209ENST00000530322 STRA6Q9BX79 667 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 LRRC27Q9C0I9 530 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 OLFML3Q9NRN5 406 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 TOPORSQ9NS56 1045 aaPredicted RBP18.45■□□□□ 0.54
SF3B2-209ENST00000530322 STK39Q9UEW8 545 aa18.45■□□□□ 0.54
SF3B2-209ENST00000530322 PDCD11Q14690 1871 aaKnown RBP18.45■□□□□ 0.54
SF3B2-209ENST00000530322 TCF20Q9UGU0 1960 aaKnown RBP18.44■□□□□ 0.54
SF3B2-209ENST00000530322 C2orf71A6NGG8 1288 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 F8W810 466 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 HNRNPDLO14979 420 aaKnown RBP18.44■□□□□ 0.54
SF3B2-209ENST00000530322 MEFVO15553 781 aaPredicted RBP18.44■□□□□ 0.54
SF3B2-209ENST00000530322 NR1I2O75469 434 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 CTSAP10619 480 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 HARSP12081 509 aaKnown RBP18.44■□□□□ 0.54
SF3B2-209ENST00000530322 BMP1P13497 986 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 IDEP14735 1019 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 LIG4P49917 911 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 YARSP54577 528 aaKnown RBP18.44■□□□□ 0.54
SF3B2-209ENST00000530322 NUCB2P80303 420 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 LEXMQ3ZCV2 418 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 ADALQ6DHV7 355 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 SLC39A4Q6P5W5 647 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 EP400NLQ6ZTU2 488 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 RNF168Q8IYW5 571 aaPredicted RBP18.44■□□□□ 0.54
SF3B2-209ENST00000530322 SNX27Q96L92 541 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 ACAP3Q96P50 834 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 PPP1R10Q96QC0 940 aaKnown RBP18.44■□□□□ 0.54
SF3B2-209ENST00000530322 CDCA3Q99618 268 aaPredicted RBP18.44■□□□□ 0.54
SF3B2-209ENST00000530322 PAAF1Q9BRP4 392 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 TRIM9Q9C026 710 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 SCAND2PQ9GZW5 306 aaPredicted RBP18.44■□□□□ 0.54
SF3B2-209ENST00000530322 MRPL44Q9H9J2 332 aaKnown RBP18.44■□□□□ 0.54
SF3B2-209ENST00000530322 MAGEF1Q9HAY2 307 aa18.44■□□□□ 0.54
SF3B2-209ENST00000530322 PANK4Q9NVE7 773 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms