RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 DACT2Q5SW24 774 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 MEI1Q5TIA1 1274 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.18□□□□□ -0.3
SCN3B-206ENST00000530277 PRUNE1Q86TP1 453 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 TTC17Q96AE7 1141 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 SEMA4AQ9H3S1 761 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 ZNF302Q9NR11 478 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 ZNRF3Q9ULT6 936 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 A0A0G2JND7 137 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 MIF4GDA9UHW6 222 aaKnown RBP13.18□□□□□ -0.3
SCN3B-206ENST00000530277 TBX3O15119 743 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 IZUMO3Q5VZ72 239 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 SCYL3Q8IZE3 742 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 MRPL47Q9HD33 250 aaKnown RBP13.18□□□□□ -0.3
SCN3B-206ENST00000530277 HAUS2Q9NVX0 235 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 SLC9A2Q9UBY0 812 aa13.18□□□□□ -0.3
SCN3B-206ENST00000530277 BAZ2AQ9UIF9 1905 aaKnown RBP13.17□□□□□ -0.3
SCN3B-206ENST00000530277 ENTPD3O75355 529 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 RRM1P23921 792 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 RGS7P49802 495 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 STXBP2Q15833 593 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 PYROXD1Q8WU10 500 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 MAIP1Q8WWC4 291 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 ERP44Q9BS26 406 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 SPDYE2BA6NHP3 402 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 SPDYE6P0CI01 402 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 SLMAPQ14BN4 828 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 SNCBQ16143 134 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 ZNF699Q32M78 642 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 CFAP157Q5JU67 520 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 PALB2Q86YC2 1186 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 GPD1LQ8N335 351 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 MCPH1Q8NEM0 835 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 DCPSQ96C86 337 aaKnown RBP13.17□□□□□ -0.3
SCN3B-206ENST00000530277 HVCN1Q96D96 273 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 PITPNM3Q9BZ71 974 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 SMYD2Q9NRG4 433 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 RGPD1P0DJD0 1748 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 MYCP01106 439 aaPredicted RBP13.17□□□□□ -0.3
SCN3B-206ENST00000530277 HLA-DRAP01903 254 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 RALAP11233 206 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 POLR2BP30876 1174 aaKnown RBP13.17□□□□□ -0.3
SCN3B-206ENST00000530277 CAP2P40123 477 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 NT5C2P49902 561 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 JAK3P52333 1124 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 PPP3CAQ08209 521 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 PSMD6Q15008 389 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 MUM1L1Q5H9M0 696 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 DCLK2Q8N568 766 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 MCEEQ96PE7 176 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 C10orf88Q9H8K7 445 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 HESX1Q9UBX0 185 aa13.17□□□□□ -0.3
SCN3B-206ENST00000530277 GOLGA4Q13439 2230 aaKnown RBP13.17□□□□□ -0.3
SCN3B-206ENST00000530277 E2F8A0AVK6 867 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 CCDC78A2IDD5 438 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 PODXLO00592 558 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 RTN2O75298 545 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 BAG2O95816 211 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 INHBAP08476 426 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 SPATA31C1P0DKV0 1188 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 KITP10721 976 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 YY1P25490 414 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 NPTX2P47972 431 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 CXCL9Q07325 125 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 MAPK6Q16659 721 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 C6orf118Q5T5N4 469 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 STMN2Q93045 179 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 RSRC1Q96IZ7 334 aaKnown RBP13.16□□□□□ -0.3
SCN3B-206ENST00000530277 ZBTB45Q96K62 511 aaPredicted RBP13.16□□□□□ -0.3
SCN3B-206ENST00000530277 PWWP2AQ96N64 755 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 FERMT1Q9BQL6 677 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 SLITRK6Q9H5Y7 841 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 KCND1Q9NSA2 647 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 FGFR1OP2Q9NVK5 253 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 CCDC160A6NGH7 325 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 GGPS1O95749 300 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 CHRNA3P32297 505 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 CA8P35219 290 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 ARSEP51690 589 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 PDIA2Q13087 525 aaKnown RBP13.16□□□□□ -0.3
SCN3B-206ENST00000530277 C6orf163Q5TEZ5 329 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 DPP9Q86TI2 863 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 CYFIP2Q96F07 1278 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 ISCUQ9H1K1 167 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 CAPN9O14815 690 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 TMEM253P0C7T8 217 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 GMPSP49915 693 aaPredicted RBP13.16□□□□□ -0.3
SCN3B-206ENST00000530277 PSMC1P62191 440 aaKnown RBP13.16□□□□□ -0.3
SCN3B-206ENST00000530277 C1orf228Q6PIY5 440 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 HIPK4Q8NE63 616 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 ANKRD36BP1Q96IX9 119 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 ADPGKQ9BRR6 497 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 MYOZ2Q9NPC6 264 aa13.16□□□□□ -0.3
SCN3B-206ENST00000530277 CCDC195A0A1B0GUA6 201 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 SLC16A3O15427 465 aaKnown RBP13.15□□□□□ -0.3
SCN3B-206ENST00000530277 BRD2P25440 801 aaKnown RBP13.15□□□□□ -0.3
SCN3B-206ENST00000530277 IL9RQ01113 521 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 FAM160B1Q5W0V3 765 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 TRIM50Q86XT4 487 aa13.15□□□□□ -0.3
SCN3B-206ENST00000530277 RBM46Q8TBY0 533 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms