RNA–Protein interactions for RNA: ENST00000529970.5

ARHGEF12-208, Transcript of Rho guanine nucleotide exchange factor 12, human

TSL 2

Gene ARHGEF12, Length 3,786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF12-208	ENST00000529970	UNC80	Q8N2C7	3258 aa		4.6	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	CLUH	O75153	1309 aa		4.6	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	LAMA3	Q16787	3333 aa		4.6	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	SMTNL1	A8MU46	457 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	CTSA	P10619	480 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	ADD1	P35611	737 aa	Known RBP	4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	CCR3	P51677	355 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	LIMK1	P53667	647 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	CDC42EP1	Q00587	391 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	KCNC3	Q14003	757 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	SART3	Q15020	963 aa	Known RBP	4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	MLF2	Q15773	248 aa	Predicted RBP	4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	ARMC3	Q5W041	872 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	ADAL	Q6DHV7	355 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	CAPN12	Q6ZSI9	719 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	ADGRF4	Q8IZF3	695 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	SLC39A11	Q8N1S5	342 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	FBXO18	Q8NFZ0	1043 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	AIFM3	Q96NN9	605 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	SLC12A7	Q9Y666	1083 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	ZNF202	O95125	648 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	C1R	P00736	705 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	MARK3	P27448	753 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	NOV	P48745	357 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	CRYBB1	P53674	252 aa	Predicted RBP	4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	GSDMD	P57764	484 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	CTDSPL2	Q05D32	466 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	SEMA3F	Q13275	785 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	DPCR1	Q3MIW9	517 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	HSP90AA4P	Q58FG1	418 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	ZNF484	Q5JVG2	852 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	C1orf228	Q6PIY5	440 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	UNQ6494/PRO21346	Q6UXR6	183 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	DDX53	Q86TM3	631 aa	Known RBP	4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	JAML	Q86YT9	394 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	TRIM22	Q8IYM9	498 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	C12orf76	Q8N812	135 aa	Predicted RBP	4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	PGBD4	Q96DM1	585 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	ZKSCAN3	Q9BRR0	538 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	RTEL1	Q9NZ71	1219 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	CEP131	Q9UPN4	1083 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	COL1A2	P08123	1366 aa		4.59	□□□□□ -1.67
ARHGEF12-208	ENST00000529970	TRIP12	Q14669	1992 aa	Predicted RBP	4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	TTC36	A6NLP5	189 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	FAM170B	A6NMN3	283 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	HIDE1	A8MVS5	230 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	ZBTB5	O15062	677 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	HBP1	O60381	514 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	YEATS4	O95619	227 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	GLUD1	P00367	558 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	SNHG28	P0DPA3	235 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	PFKFB1	P16118	471 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	PML	P29590	882 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	STARD6	P59095	220 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	GHRHR	Q02643	423 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	SSRP1	Q08945	709 aa	Known RBP	4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	SPEM2	Q0P670	501 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	SIM2	Q14190	667 aa	Predicted RBP	4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	ZNF852	Q6ZMS4	543 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	PRR23C	Q6ZRP0	262 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	RBM43	Q6ZSC3	357 aa	Known RBP	4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	LRRC8A	Q8IWT6	810 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	SLC44A3	Q8N4M1	653 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	LINC00301	Q8NCQ3	95 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	CNNM3	Q8NE01	707 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	MRFAP1L1	Q96HT8	127 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	INPP4A	Q96PE3	977 aa	Predicted RBP	4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	AGO3	Q9H9G7	860 aa	Known RBP	4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	IL17RB	Q9NRM6	502 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	KIAA1468	Q9P260	1216 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	HOOK1	Q9UJC3	728 aa	Known RBP	4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	PAXBP1	Q9Y5B6	917 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	IRAK3	Q9Y616	596 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	NLRC5	Q86WI3	1866 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	GREB1L	Q9C091	1923 aa	Predicted RBP	4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	GVINP1	Q7Z2Y8	2422 aa		4.59	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	TPR	P12270	2363 aa	Known RBP	4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	MYH4	Q9Y623	1939 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	PRSS47	A8MTI9	375 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970		C9IYK1	514 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	BACH1	O14867	736 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	WEE2	P0C1S8	567 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	FDPS	P14324	419 aa	Known RBP	4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	INSRR	P14616	1297 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	U2AF2	P26368	475 aa	Known RBP eCLIP	4.58	□□□□□ -1.68	2e-8	■■■■□ 21.3
ARHGEF12-208	ENST00000529970	GATM	P50440	423 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	RAB27A	P51159	221 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	ADAM17	P78536	824 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	SNW1	Q13573	536 aa	Known RBP	4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	DSG2	Q14126	1118 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	IQCB1	Q15051	598 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	DAB2IP	Q5VWQ8	1189 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	GLYCTK	Q8IVS8	523 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	MB21D2	Q8IYB1	491 aa	Predicted RBP	4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	ZBTB44	Q8NCP5	570 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	KIF18A	Q8NI77	898 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	GPR152	Q8TDT2	470 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	SLC39A13	Q96H72	371 aa		4.58	□□□□□ -1.68
ARHGEF12-208	ENST00000529970	NAP1L4	Q99733	375 aa	Known RBP	4.58	□□□□□ -1.68

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