RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 HOXA6P31267 233 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 SCNN1GP51170 649 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 RTN1Q16799 776 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 AASDHQ4L235 1098 aaPredicted RBP12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 AXDND1Q5T1B0 1012 aaPredicted RBP12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 LRCH2Q5VUJ6 765 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 NOTUMQ6P988 496 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 APOA5Q6Q788 366 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 B3GNT9Q6UX72 402 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 MIER3Q7Z3K6 550 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 LNX1Q8TBB1 728 aaPredicted RBP12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 BICD2Q8TD16 824 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 PSPC1Q8WXF1 523 aaKnown RBP12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 SLC7A3Q8WY07 619 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 FAM3CQ92520 227 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 IRF7Q92985 503 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 LOXL4Q96JB6 756 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 MINDY3Q9H8M7 445 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 NDRG2Q9UN36 371 aaKnown RBP12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 POLIQ9UNA4 740 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 MRPS23Q9Y3D9 190 aaKnown RBP12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 CEP295Q9C0D2 2601 aa12.99□□□□□ -0.33
AMBRA1-207ENST00000529553 ZMYM2Q9UBW7 1377 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 MTCL1Q9Y4B5 1905 aaKnown RBP12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 CHMP2AO43633 222 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 MICAL2O94851 1124 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 KCNK5O95279 499 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 SRGAP2CP0DJJ0 459 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 LAMTOR4Q0VGL1 99 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 RAB33AQ14088 237 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 RTP2Q5QGT7 225 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 TANGO2Q6ICL3 276 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 C1orf228Q6PIY5 440 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 PRSS55Q6UWB4 352 aaPredicted RBP12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 UNQ6494/PRO21346Q6UXR6 183 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 ANO5Q75V66 913 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 MAP4K3Q8IVH8 894 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 GSTCDQ8NEC7 633 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 MCRS1Q96EZ8 462 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 CCDC136Q96JN2 1154 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 ZFP42Q96MM3 310 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 TRMT61BQ9BVS5 477 aaKnown RBP12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 LSM14BQ9BX40 385 aaKnown RBP12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 CSRNP2Q9H175 543 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 BRD9Q9H8M2 597 aa12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 FASNP49327 2511 aaKnown RBP12.98□□□□□ -0.33
AMBRA1-207ENST00000529553 COL4A3Q01955 1670 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 TMEM150BA6NC51 233 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 CHURC1-FNTBB4DL54 471 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 ZBTB43O43298 467 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 DKC1O60832 514 aaKnown RBP eCLIP12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 ERLIN2O94905 339 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 IGHDP01880 384 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 CHRNB1P11230 501 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 GSPT1P15170 499 aaKnown RBP12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 RFC5P40937 340 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 FNTBP49356 437 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 RCAN1P53805 252 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 PSMC5P62195 406 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 SATB1Q01826 763 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 POU5F1BQ06416 359 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 ELAVL2Q12926 359 aaKnown RBP12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 GRIK3Q13003 919 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 HSP90AA2PQ14568 343 aaPredicted RBP12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 PSMD5Q16401 504 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 Q4G0T1 1027 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 TTC22Q5TAA0 569 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 FAM160A2Q8N612 972 aaPredicted RBP12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 C12orf50Q8NA57 414 aaPredicted RBP12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 SLC7A14Q8TBB6 771 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 TCP11Q8WWU5 503 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 COL26A1Q96A83 441 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 MSANTD3Q96H12 275 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 SH2D3AQ9BRG2 576 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 EIF2AQ9BY44 585 aaKnown RBP12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 DHX33Q9H6R0 707 aaKnown RBP12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 ZFP14Q9HCL3 533 aa12.97□□□□□ -0.33
AMBRA1-207ENST00000529553 CNOT1A5YKK6 2376 aaKnown RBP12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 MYH15Q9Y2K3 1946 aa12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 C1QTNF9BB2RNN3 333 aa12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 EDIL3O43854 480 aa12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 RHOP08100 348 aa12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 C1QTNF9P0C862 333 aa12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 PTPN2P17706 415 aa12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 SPIRE1Q08AE8 756 aa12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 STPG1Q5TH74 334 aa12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 FAM171A1Q5VUB5 890 aa12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 LRSAM1Q6UWE0 723 aa12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 CEP68Q76N32 757 aa12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 LRRC2Q9BYS8 371 aa12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 ZNF334Q9HCZ1 680 aaPredicted RBP12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 HCFC1R1Q9NWW0 138 aa12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 HES2Q9Y543 173 aa12.96□□□□□ -0.33
AMBRA1-207ENST00000529553 ZZEF1O43149 2961 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 CYP3A7-CYP3A51PA0A087WV96 503 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 CCDC196A0A1B0GTZ2 297 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 K7ESF4 209 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 ZNF197O14709 1029 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 SLC27A2O14975 620 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 ADAMTS3O15072 1205 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms