RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 INO80BQ9C086 356 aaPredicted RBP19.05■□□□□ 0.64
LTBP3-210ENST00000528516 NAGPAQ9UK23 515 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 F5H423 210 aaPredicted RBP19.05■□□□□ 0.64
LTBP3-210ENST00000528516 CALB2P22676 271 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 CNGA1P29973 690 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 ARL1P40616 181 aaPredicted RBP19.05■□□□□ 0.64
LTBP3-210ENST00000528516 PPP2R5CQ13362 524 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 SRRM1Q8IYB3 904 aaKnown RBP19.05■□□□□ 0.64
LTBP3-210ENST00000528516 C11orf70Q9BRQ4 267 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 FAM213AQ9BRX8 229 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 LXNQ9BS40 222 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 FOXO6A8MYZ6 492 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 SBK1Q52WX2 424 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 TMEM179Q6ZVK1 233 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 STMN2Q93045 179 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 STK32BQ9NY57 414 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 TXNDC16Q9P2K2 825 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 TMEM59LQ9UK28 342 aa19.05■□□□□ 0.64
LTBP3-210ENST00000528516 AFDNP55196 1824 aaKnown RBP19.04■□□□□ 0.64
LTBP3-210ENST00000528516 COL14A1Q05707 1796 aaKnown RBP19.04■□□□□ 0.64
LTBP3-210ENST00000528516 SGK1O00141 431 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 CYP26A1O43174 497 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 SKIP12755 728 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 NCAPG2Q86XI2 1143 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 COL23A1Q86Y22 540 aaPredicted RBP19.04■□□□□ 0.64
LTBP3-210ENST00000528516 RMDN2Q96LZ7 410 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 APOL6Q9BWW8 343 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 KCNQ5Q9NR82 932 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 USP20Q9Y2K6 914 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 CCDC160A6NGH7 325 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 CREB3O43889 395 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 TUBP50607 506 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 SYT15Q9BQS2 421 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 hCG_2014768A0A024R1R8 64 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 NVLO15381 856 aaKnown RBP19.04■□□□□ 0.64
LTBP3-210ENST00000528516 ECE2O60344 883 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 KCNA3P22001 575 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 ECE1P42892 770 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 NPEPPSP55786 919 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 THNSL1Q8IYQ7 743 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 DTX3LQ8TDB6 740 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 LRRC37BQ96QE4 947 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 EPAS1Q99814 870 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 MOV10L1Q9BXT6 1211 aaKnown RBP19.04■□□□□ 0.64
LTBP3-210ENST00000528516 CALN1Q9BXU9 219 aa19.04■□□□□ 0.64
LTBP3-210ENST00000528516 ATF5Q9Y2D1 282 aaPredicted RBP19.04■□□□□ 0.64
LTBP3-210ENST00000528516 GOLGA4Q13439 2230 aaKnown RBP19.03■□□□□ 0.64
LTBP3-210ENST00000528516 A0A1B0GVG6 124 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 BFSP1Q12934 665 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 CATSPER3Q86XQ3 398 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 PALM2Q8IXS6 379 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 STK32AQ8WU08 396 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 RMDN3Q96TC7 470 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 OSGEPQ9NPF4 335 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.03■□□□□ 0.64
LTBP3-210ENST00000528516 SIPA1L3O60292 1781 aaPredicted RBP19.03■□□□□ 0.64
LTBP3-210ENST00000528516 PASKQ96RG2 1323 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 PALM3A6NDB9 673 aaPredicted RBP19.03■□□□□ 0.64
LTBP3-210ENST00000528516 A6NHS1 94 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 PI4K2BG5E9Z4 385 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 MED24O75448 989 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 SPP2Q13103 211 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 SESTD1Q86VW0 696 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 C18orf8Q96DM3 657 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 GORASP1Q9BQQ3 440 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 METTL5Q9NRN9 209 aaKnown RBP19.03■□□□□ 0.64
LTBP3-210ENST00000528516 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.03■□□□□ 0.64
LTBP3-210ENST00000528516 PARP2Q9UGN5 583 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 ANAPC4Q9UJX5 808 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 ANKRD33BA6NCL7 494 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 RBAK-RBAKDNI3L0D1 243 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 SAT1P21673 171 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 GCLCP48506 637 aaPredicted RBP19.03■□□□□ 0.64
LTBP3-210ENST00000528516 PEX5P50542 639 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 GALNT15Q8N3T1 639 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 SYN2Q92777 582 aaPredicted RBP19.03■□□□□ 0.64
LTBP3-210ENST00000528516 IKZF4Q9H2S9 585 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 ARHGEF3Q9NR81 526 aa19.03■□□□□ 0.64
LTBP3-210ENST00000528516 CREB1P16220 341 aa19.02■□□□□ 0.64
LTBP3-210ENST00000528516 RASSF2P50749 326 aa19.02■□□□□ 0.64
LTBP3-210ENST00000528516 MFAP3P55082 362 aa19.02■□□□□ 0.64
LTBP3-210ENST00000528516 RSAD2Q8WXG1 361 aa19.02■□□□□ 0.64
LTBP3-210ENST00000528516 BTBD6Q96KE9 485 aa19.02■□□□□ 0.64
LTBP3-210ENST00000528516 PI4K2AQ9BTU6 479 aa19.02■□□□□ 0.64
LTBP3-210ENST00000528516 CHCHD3Q9NX63 227 aaKnown RBP19.02■□□□□ 0.64
LTBP3-210ENST00000528516 PCDHAC2Q9Y5I4 1007 aa19.02■□□□□ 0.64
LTBP3-210ENST00000528516 MAD1L1Q9Y6D9 718 aa19.02■□□□□ 0.64
LTBP3-210ENST00000528516 ENTPD5O75356 428 aa19.02■□□□□ 0.64
LTBP3-210ENST00000528516 ECEL1O95672 775 aa19.02■□□□□ 0.64
LTBP3-210ENST00000528516 KCNA1Q09470 495 aa19.02■□□□□ 0.64
LTBP3-210ENST00000528516 PPP2R5EQ16537 467 aa19.02■□□□□ 0.64
LTBP3-210ENST00000528516 KRT27Q7Z3Y8 459 aa19.02■□□□□ 0.64
LTBP3-210ENST00000528516 FAM210AQ96ND0 272 aa19.02■□□□□ 0.64
LTBP3-210ENST00000528516 WDR11Q9BZH6 1224 aa19.02■□□□□ 0.64
LTBP3-210ENST00000528516 MYH7BA7E2Y1 1941 aa19.02■□□□□ 0.63
LTBP3-210ENST00000528516 MYO5AQ9Y4I1 1855 aaKnown RBP19.02■□□□□ 0.63
LTBP3-210ENST00000528516 NOL4O94818 638 aa19.02■□□□□ 0.63
LTBP3-210ENST00000528516 ATP6V1C1P21283 382 aa19.02■□□□□ 0.63
LTBP3-210ENST00000528516 PTDSS1P48651 473 aaKnown RBP19.02■□□□□ 0.63
LTBP3-210ENST00000528516 PLA2G4FQ68DD2 849 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms