RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	USP15	Q9Y4E8	981 aa	Predicted RBP	12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	HCFC2	Q9Y5Z7	792 aa		12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	PLXNA4	Q9HCM2	1894 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	NCOR1	O75376	2440 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	C5orf42	Q9H799	3197 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	LILRB3	O75022	631 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	BRD1	O95696	1058 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	SOD2	P04179	222 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	GRM5	P41594	1212 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	ZNF131	P52739	623 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	NCKAP1L	P55160	1127 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	TUSC3	Q13454	348 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	GIT2	Q14161	759 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	NAB2	Q15742	525 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	ANKRD54	Q6NXT1	300 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	ADHFE1	Q8IWW8	467 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	GJD3	Q8N144	294 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	KRI1	Q8N9T8	703 aa	Known RBP	12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	LINC00301	Q8NCQ3	95 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	LARP4B	Q92615	738 aa	Known RBP	12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	RABGGTA	Q92696	567 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	CASP10	Q92851	521 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	KCNN1	Q92952	543 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	PAAF1	Q9BRP4	392 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	S1PR5	Q9H228	398 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	LARS	Q9P2J5	1176 aa	Known RBP	12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	DAXX	Q9UER7	740 aa	Predicted RBP	12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	PRKAG3	Q9UGI9	489 aa		12.91	□□□□□ -0.34
PSMC3-205	ENST00000528362	CASTOR2	A6NHX0	329 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	C19orf67	A6NJJ6	358 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	NR1I2	O75469	434 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	HSP90AA1	P07900	732 aa	Known RBP	12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	CNP	P09543	421 aa	Known RBP	12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	SRGAP2B	P0DMP2	458 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	DDIT3	P35638	169 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	SMTN	P53814	917 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	STRN3	Q13033	797 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	PKP1	Q13835	747 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	MPZL3	Q6UWV2	235 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	ZBTB33	Q86T24	672 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	SLC22A17	Q8WUG5	538 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	SUSD6	Q92537	303 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	ZBTB45	Q96K62	511 aa	Predicted RBP	12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	FIZ1	Q96SL8	496 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	COLEC11	Q9BWP8	271 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	GPR62	Q9BZJ7	368 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	PARVG	Q9HBI0	331 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	MRPL17	Q9NRX2	175 aa	Known RBP	12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	STK17A	Q9UEE5	414 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362	KCNG1	Q9UIX4	513 aa		12.9	□□□□□ -0.34
PSMC3-205	ENST00000528362		A0A087X0B3	334 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	C2CD2L	O14523	706 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	MEFV	O15553	781 aa	Predicted RBP	12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	TOM1L1	O75674	476 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	FAM13A	O94988	1023 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	KIF4A	O95239	1232 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	UROD	P06132	367 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	TH	P07101	528 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	ZSCAN22	P10073	491 aa	Predicted RBP	12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	MCF2	P10911	925 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	EPCAM	P16422	314 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	SSTR3	P32745	418 aa	Predicted RBP	12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	TXLNA	P40222	546 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	OSTN	P61366	133 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	HSP90AA2P	Q14568	343 aa	Predicted RBP	12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	XKR4	Q5GH76	650 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	GLRA4	Q5JXX5	417 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	FUT10	Q6P4F1	479 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	ZPBP2	Q6X784	338 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	HAUS6	Q7Z4H7	955 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	MYCT1	Q8N699	235 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	TMEM87A	Q8NBN3	555 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	SPRYD3	Q8NCJ5	442 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	B3GALT6	Q96L58	329 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	SNX27	Q96L92	541 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	KLHL5	Q96PQ7	755 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	PPP1R10	Q96QC0	940 aa	Known RBP	12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	TCHP	Q9BT92	498 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	CCDC94	Q9BW85	323 aa	Predicted RBP	12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	APOL5	Q9BWW9	433 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	EMILIN2	Q9BXX0	1053 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	ANKFY1	Q9P2R3	1169 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	TFIP11	Q9UBB9	837 aa	Known RBP	12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	CCDC39	Q9UFE4	941 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	ADAM28	Q9UKQ2	775 aa		12.89	□□□□□ -0.35
PSMC3-205	ENST00000528362	SMIM28	A0A1B0GU29	152 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362		H0YCG3	227 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362		K7ENM7	598 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	SPTLC2	O15270	562 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	TBCA	O75347	108 aa	Known RBP	12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	YEATS4	O95619	227 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	F13A1	P00488	732 aa		12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	KRT18	P05783	430 aa	Known RBP	12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	HARS	P12081	509 aa	Known RBP	12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	HOXB8	P17481	243 aa	Predicted RBP	12.88	□□□□□ -0.35
PSMC3-205	ENST00000528362	COL9A1	P20849	921 aa		12.88	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms