RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 N4BP3O15049 544 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 PDGFBP01127 241 aaPredicted RBP9.39□□□□□ -0.91
CHD7-206ENST00000527900 PRKCBP05771 671 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 URODP06132 367 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 ASGR2P07307 311 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 ADH1AP07327 375 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 ATXN8OSP0DMR3 200 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 IGFBP6P24592 240 aaPredicted RBP9.39□□□□□ -0.91
CHD7-206ENST00000527900 AVPR2P30518 371 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 CCT6AP40227 531 aaKnown RBP9.39□□□□□ -0.91
CHD7-206ENST00000527900 PRPHP41219 470 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 VCPP55072 806 aaKnown RBP9.39□□□□□ -0.91
CHD7-206ENST00000527900 TUSC3Q13454 348 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 PRPF4BQ13523 1007 aaKnown RBP9.39□□□□□ -0.91
CHD7-206ENST00000527900 MTMR3Q13615 1198 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 MAPK6Q16659 721 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 USP41Q3LFD5 358 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 HAUS3Q68CZ6 603 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 CD300LGQ6UXG3 332 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 ALKAL1Q6UXT8 129 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 TAS1R3Q7RTX0 852 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 ALYREFQ86V81 257 aaKnown RBP9.39□□□□□ -0.91
CHD7-206ENST00000527900 ZBTB8OSQ8IWT0 167 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 FAM184AQ8NB25 1140 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 TMEM87AQ8NBN3 555 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 SPDYE1Q8NFV5 336 aaPredicted RBP9.39□□□□□ -0.91
CHD7-206ENST00000527900 RABGGTAQ92696 567 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 ZNF707Q96C28 371 aaPredicted RBP9.39□□□□□ -0.91
CHD7-206ENST00000527900 B3GALT6Q96L58 329 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 BHMT2Q9H2M3 363 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 PTPRHQ9HD43 1115 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 MAN1C1Q9NR34 630 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 SNTG2Q9NY99 539 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 PARP2Q9UGN5 583 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 KIAA1024Q9UPX6 916 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 PIEZO1Q92508 2521 aa9.39□□□□□ -0.91
CHD7-206ENST00000527900 NOTCH4Q99466 2003 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 CCDC195A0A1B0GUA6 201 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 PP2D1A8MPX8 630 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 LAD1O00515 517 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 ABLIM1O14639 778 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 TGM5O43548 720 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 NR1I2O75469 434 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 RFPL2O75678 378 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 RECQL4O94761 1208 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 CD2BP2O95400 341 aaKnown RBP9.38□□□□□ -0.91
CHD7-206ENST00000527900 GLUD1P00367 558 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 THP07101 528 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 EFNA5P52803 228 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 MAPK7Q13164 816 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 HSP90AA2PQ14568 343 aaPredicted RBP9.38□□□□□ -0.91
CHD7-206ENST00000527900 PPP2R5AQ15172 486 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 XKR4Q5GH76 650 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 RTP2Q5QGT7 225 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 HYIQ5T013 277 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 C1orf186Q6ZWK4 172 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 KCNK18Q7Z418 384 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 TDRD5Q8NAT2 981 aaKnown RBP9.38□□□□□ -0.91
CHD7-206ENST00000527900 KIFAP3Q92845 792 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 PHOX2BQ99453 314 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 PRRX2Q99811 253 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 CLSTN3Q9BQT9 956 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 NTPCRQ9BSD7 190 aaKnown RBP9.38□□□□□ -0.91
CHD7-206ENST00000527900 KIFC3Q9BVG8 833 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 NT5C3AQ9H0P0 336 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 PLEKHA4Q9H4M7 779 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 TMEM134Q9H6X4 195 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 WDR6Q9NNW5 1121 aaKnown RBP9.38□□□□□ -0.91
CHD7-206ENST00000527900 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHD7-206ENST00000527900 DDX19AQ9NUU7 478 aaKnown RBP9.38□□□□□ -0.91
CHD7-206ENST00000527900 ARHGAP28Q9P2N2 729 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 NOL7Q9UMY1 257 aaKnown RBP9.38□□□□□ -0.91
CHD7-206ENST00000527900 STK24Q9Y6E0 443 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 MYO15AQ9UKN7 3530 aa9.38□□□□□ -0.91
CHD7-206ENST00000527900 E9PMD0 336 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 TMEM189-UBE2V1I3L0A0 370 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 TADA2AO75478 443 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 KIF4AO95239 1232 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 SPATA31D3P0C874 917 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 RPL17P18621 184 aaKnown RBP9.37□□□□□ -0.91
CHD7-206ENST00000527900 PROZP22891 400 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 CDC25AP30304 524 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 NPTX2P47972 431 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 MRE11P49959 708 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 NUBP1P53384 320 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 ATP2C1P98194 919 aaPredicted RBP9.37□□□□□ -0.91
CHD7-206ENST00000527900 RABEP1Q15276 862 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 RINT1Q6NUQ1 792 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 SPATA31D4Q6ZUB0 917 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 CCDC149Q6ZUS6 474 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 OTOP3Q7RTS5 596 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 PALB2Q86YC2 1186 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 SUGP1Q8IWZ8 645 aaKnown RBP9.37□□□□□ -0.91
CHD7-206ENST00000527900 DEPTORQ8TB45 409 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 LNX1Q8TBB1 728 aaPredicted RBP9.37□□□□□ -0.91
CHD7-206ENST00000527900 SNX29Q8TEQ0 813 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 RIN2Q8WYP3 895 aaPredicted RBP9.37□□□□□ -0.91
CHD7-206ENST00000527900 PIK3R5Q8WYR1 880 aa9.37□□□□□ -0.91
CHD7-206ENST00000527900 ACSF2Q96CM8 615 aaPredicted RBP9.37□□□□□ -0.91
CHD7-206ENST00000527900 TMX3Q96JJ7 454 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms