RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SENP7Q9BQF6 1050 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 PCDHB2Q9Y5E7 798 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 EBAG9O00559 213 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 TJP3O95049 919 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 INSRRP14616 1297 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 EPHB4P54760 987 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 PLTPP55058 493 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 TFDP2Q14188 446 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 IP6K2Q9UHH9 426 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 ZMYND10O75800 440 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 CSPG5O95196 566 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 CASP4P49662 377 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 DCAF4L1Q3SXM0 396 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 PPP6R3Q5H9R7 873 aaPredicted RBP16.07■□□□□ 0.16
USP47-207ENST00000527733 KIAA0895Q8NCT3 520 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 CPSF3Q9UKF6 684 aaKnown RBP16.07■□□□□ 0.16
USP47-207ENST00000527733 ATP2C2O75185 946 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 PRPSAP1Q14558 356 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 GLB1LQ6UWU2 654 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 BZW1Q7L1Q6 419 aaKnown RBP16.07■□□□□ 0.16
USP47-207ENST00000527733 APPL2Q8NEU8 664 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 NIF3L1Q9GZT8 377 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 RSPH14Q9UHP6 348 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 FRMPD4Q14CM0 1322 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 NPTXRO95502 500 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 DGKZQ13574 1117 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 CDKAL1Q5VV42 579 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 KCNK18Q7Z418 384 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 HSPH1Q92598 858 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 PLIN4Q96Q06 1357 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 FZD9O00144 591 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 FAM102AQ5T9C2 384 aaPredicted RBP16.06■□□□□ 0.16
USP47-207ENST00000527733 REPS2Q8NFH8 660 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 SYN2Q92777 582 aaPredicted RBP16.06■□□□□ 0.16
USP47-207ENST00000527733 TBC1D31Q96DN5 1066 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 PARVAQ9NVD7 372 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 MAD1L1Q9Y6D9 718 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 DOT1LQ8TEK3 1739 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 IGKV6D-41A0A0C4DH26 115 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 CCDC151A5D8V7 595 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 RPLP2P05387 115 aaKnown RBP16.06■□□□□ 0.16
USP47-207ENST00000527733 PTGER2P43116 358 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 KLK7P49862 253 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 SLC12A2P55011 1212 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 DR1Q01658 176 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 TAP1Q03518 808 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 KIZQ2M2Z5 673 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 HHATQ5VTY9 493 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 E4F1Q66K89 784 aaPredicted RBP16.06■□□□□ 0.16
USP47-207ENST00000527733 RGMBQ6NW40 437 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 MPZL3Q6UWV2 235 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 SH3RF1Q7Z6J0 888 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 SPIRE2Q8WWL2 714 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 ACVR2BQ13705 512 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 IQSEC1Q6DN90 963 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 ELMSAN1Q6PJG2 1045 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 CAPN12Q6ZSI9 719 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 ARRDC4Q8NCT1 418 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 DNAJC18Q9H819 358 aa16.06■□□□□ 0.16
USP47-207ENST00000527733 PRDM5Q9NQX1 630 aaPredicted RBP16.06■□□□□ 0.16
USP47-207ENST00000527733 KRT7P08729 469 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 UBA1P22314 1058 aaKnown RBP16.05■□□□□ 0.16
USP47-207ENST00000527733 PSMC4P43686 418 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 APBA1Q02410 837 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 UHMK1Q8TAS1 419 aaKnown RBP16.05■□□□□ 0.16
USP47-207ENST00000527733 ZNF507Q8TCN5 953 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 ATP2A3Q93084 1043 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 C18orf8Q96DM3 657 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 KCNF1Q9H3M0 494 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 ANAPC5Q9UJX4 755 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 SRGAP2O75044 1071 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 USP2O75604 605 aaPredicted RBP16.05■□□□□ 0.16
USP47-207ENST00000527733 AKAP3O75969 853 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 AKR1A1P14550 325 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 OAS2P29728 719 aaKnown RBP16.05■□□□□ 0.16
USP47-207ENST00000527733 GALCP54803 685 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 SMC1BQ8NDV3 1235 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 PLAGL2Q9UPG8 496 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 ASTN2O75129 1339 aaPredicted RBP16.05■□□□□ 0.16
USP47-207ENST00000527733 ZNF286BP0CG31 522 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 THPOP40225 353 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 LAMTOR4Q0VGL1 99 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 NCAPHQ15003 741 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 RAD9BQ6WBX8 426 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 TTC13Q8NBP0 860 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 GCNAQ96QF7 691 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 OSBPL9Q96SU4 736 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 DONSONQ9NYP3 566 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 TACC3Q9Y6A5 838 aa16.05■□□□□ 0.16
USP47-207ENST00000527733 SART1O43290 800 aaKnown RBP16.04■□□□□ 0.16
USP47-207ENST00000527733 ZBED1O96006 694 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 VTNP04004 478 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 CFAP157Q5JU67 520 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 TRIM65Q6PJ69 517 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 RHOT1Q8IXI2 618 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 ITGB5P18084 799 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 YWHAGP61981 247 aaKnown RBP eCLIP16.04■□□□□ 0.16
USP47-207ENST00000527733 ARHGEF18Q6ZSZ5 1173 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 TMC2Q8TDI7 906 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 UBE2Q2Q8WVN8 375 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms