RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 EXTL3O43909 919 aa16.5■□□□□ 0.23
USH1C-207ENST00000527720 PPFIA4O75335 1185 aa16.5■□□□□ 0.23
USH1C-207ENST00000527720 KRT14P02533 472 aa16.5■□□□□ 0.23
USH1C-207ENST00000527720 SPDYCQ5MJ68 293 aa16.5■□□□□ 0.23
USH1C-207ENST00000527720 C15orf39Q6ZRI6 1047 aa16.5■□□□□ 0.23
USH1C-207ENST00000527720 TAS1R3Q7RTX0 852 aa16.5■□□□□ 0.23
USH1C-207ENST00000527720 EFCAB13Q8IY85 973 aa16.5■□□□□ 0.23
USH1C-207ENST00000527720 ALG3Q92685 438 aa16.5■□□□□ 0.23
USH1C-207ENST00000527720 BICD1Q96G01 975 aa16.5■□□□□ 0.23
USH1C-207ENST00000527720 POP1Q99575 1024 aaKnown RBP16.5■□□□□ 0.23
USH1C-207ENST00000527720 MAFBQ9Y5Q3 323 aaPredicted RBP16.5■□□□□ 0.23
USH1C-207ENST00000527720 STYXL1Q9Y6J8 313 aa16.5■□□□□ 0.23
USH1C-207ENST00000527720 HMGB1P1B2RPK0 211 aaPredicted RBP16.5■□□□□ 0.23
USH1C-207ENST00000527720 MMEP08473 750 aa16.5■□□□□ 0.23
USH1C-207ENST00000527720 SOX10P56693 466 aa16.5■□□□□ 0.23
USH1C-207ENST00000527720 EMC2Q15006 297 aa16.5■□□□□ 0.23
USH1C-207ENST00000527720 PLAAQ9Y263 795 aa16.5■□□□□ 0.23
USH1C-207ENST00000527720 DAPK3O43293 454 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 PIGRP01833 764 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 CTNNA2P26232 953 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 HSD17B3P37058 310 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 PEX5P50542 639 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 IRAK1P51617 712 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 STRN3Q13033 797 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 PSMD6Q15008 389 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 ZNF677Q86XU0 584 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 ZNF564Q8TBZ8 553 aaPredicted RBP16.49■□□□□ 0.23
USH1C-207ENST00000527720 DDX1Q92499 740 aaKnown RBP16.49■□□□□ 0.23
USH1C-207ENST00000527720 CD101Q93033 1021 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 TOPORSQ9NS56 1045 aaPredicted RBP16.49■□□□□ 0.23
USH1C-207ENST00000527720 PPP1R1BQ9UD71 204 aaPredicted RBP16.49■□□□□ 0.23
USH1C-207ENST00000527720 DLATP10515 647 aaKnown RBP16.49■□□□□ 0.23
USH1C-207ENST00000527720 COMTP21964 271 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 LIG4P49917 911 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 POLGP54098 1239 aaPredicted RBP16.49■□□□□ 0.23
USH1C-207ENST00000527720 DRG2P55039 364 aaKnown RBP16.49■□□□□ 0.23
USH1C-207ENST00000527720 DR1Q01658 176 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 MTERF2Q49AM1 385 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 SEL1L2Q5TEA6 688 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 PRAMEF18Q5VWM3 479 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 ACAD10Q6JQN1 1059 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 KDM7AQ6ZMT4 941 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 DDX42Q86XP3 938 aaKnown RBP eCLIP16.49■□□□□ 0.23
USH1C-207ENST00000527720 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.49■□□□□ 0.23
USH1C-207ENST00000527720 TRPM4Q8TD43 1214 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 DHX38Q92620 1227 aaKnown RBP16.49■□□□□ 0.23
USH1C-207ENST00000527720 FAM213AQ9BRX8 229 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 NUP85Q9BW27 656 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 ZNF302Q9NR11 478 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 C1orf112Q9NSG2 853 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 GPRC5DQ9NZD1 345 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 RASAL2Q9UJF2 1139 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 TRPC6Q9Y210 931 aa16.49■□□□□ 0.23
USH1C-207ENST00000527720 GOLGA6L10A6NI86 522 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 PHF2O75151 1096 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 OATP04181 439 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 CHRNA3P32297 505 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 CTNNA1P35221 906 aaKnown RBP16.48■□□□□ 0.23
USH1C-207ENST00000527720 NAMPTP43490 491 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 MESDQ14696 234 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 SLFN12LQ6IEE8 588 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 ZNF653Q96CK0 615 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 ATP6V1G3Q96LB4 118 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 RUNDC3BQ96NL0 473 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 ERP44Q9BS26 406 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 NIFKQ9BYG3 293 aaKnown RBP16.48■□□□□ 0.23
USH1C-207ENST00000527720 PORCNQ9H237 461 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 NEUROG2Q9H2A3 272 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 DHX33Q9H6R0 707 aaKnown RBP16.48■□□□□ 0.23
USH1C-207ENST00000527720 GGA3Q9NZ52 723 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 FBXO40Q9UH90 709 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 NR2E1Q9Y466 385 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 PAPPA2Q9BXP8 1791 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 LDHAP00338 332 aaKnown RBP16.48■□□□□ 0.23
USH1C-207ENST00000527720 GBP1P32455 592 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 BPIFB4P59827 614 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 SP4Q02446 784 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 DUPD1Q68J44 220 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 PSPC1Q8WXF1 523 aaKnown RBP16.48■□□□□ 0.23
USH1C-207ENST00000527720 CELF4Q9BZC1 486 aaKnown RBP16.48■□□□□ 0.23
USH1C-207ENST00000527720 TMBIM4Q9HC24 238 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 FZD1Q9UP38 647 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 TELO2Q9Y4R8 837 aa16.48■□□□□ 0.23
USH1C-207ENST00000527720 IGKV6D-21A0A0A0MT36 114 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 H0YGN5 161 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 EIF3HO15372 352 aaKnown RBP eCLIP16.47■□□□□ 0.23
USH1C-207ENST00000527720 GRIN3BO60391 1043 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 SP2Q02086 613 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 ZNF211Q13398 564 aaPredicted RBP16.47■□□□□ 0.23
USH1C-207ENST00000527720 UAP1Q16222 522 aaPredicted RBP16.47■□□□□ 0.23
USH1C-207ENST00000527720 CLEC16AQ2KHT3 1053 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 TMC3Q7Z5M5 1100 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 KRT35Q92764 455 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 TATDN2Q93075 761 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 FNBP1Q96RU3 617 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 ERVK-5Q9HDB9 667 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 PCYOX1Q9UHG3 505 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 PCDHA3Q9Y5H8 950 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 NFS1Q9Y697 457 aa16.47■□□□□ 0.23
USH1C-207ENST00000527720 LRRC37A2A6NM11 1700 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms