RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 ZNF572Q7Z3I7 529 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-217ENST00000527599 RBM12Q9NTZ6 932 aaKnown RBP10.06□□□□□ -0.8
CTNND1-217ENST00000527599 HS3ST4Q9Y661 456 aa10.06□□□□□ -0.8
CTNND1-217ENST00000527599 PNPLA7Q6ZV29 1317 aa10.06□□□□□ -0.8
CTNND1-217ENST00000527599 CXorf49A8MYA2 514 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-217ENST00000527599 ZSCAN20P17040 1043 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-217ENST00000527599 PTPN7P35236 360 aa10.05□□□□□ -0.8
CTNND1-217ENST00000527599 RNASE9P60153 205 aaKnown RBP10.05□□□□□ -0.8
CTNND1-217ENST00000527599 FAM47AQ5JRC9 791 aa10.05□□□□□ -0.8
CTNND1-217ENST00000527599 NEU1Q99519 415 aa10.05□□□□□ -0.8
CTNND1-217ENST00000527599 TRPM5Q9NZQ8 1165 aa10.05□□□□□ -0.8
CTNND1-217ENST00000527599 CLCA2Q9UQC9 943 aa10.05□□□□□ -0.8
CTNND1-217ENST00000527599 CADPSQ9ULU8 1353 aa10.04□□□□□ -0.8
CTNND1-217ENST00000527599 SBNO2Q9Y2G9 1366 aa10.04□□□□□ -0.8
CTNND1-217ENST00000527599 ZNF185O15231 689 aa10.04□□□□□ -0.8
CTNND1-217ENST00000527599 SUV39H1O43463 412 aa10.04□□□□□ -0.8
CTNND1-217ENST00000527599 ALOX15P16050 662 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-217ENST00000527599 MALLQ13021 153 aa10.04□□□□□ -0.8
CTNND1-217ENST00000527599 SEPT2Q15019 361 aa10.04□□□□□ -0.8
CTNND1-217ENST00000527599 EFCAB12Q6NXP0 572 aa10.04□□□□□ -0.8
CTNND1-217ENST00000527599 GDF7Q7Z4P5 450 aa10.04□□□□□ -0.8
CTNND1-217ENST00000527599 TFAP2CQ92754 450 aa10.04□□□□□ -0.8
CTNND1-217ENST00000527599 SLC2A13Q96QE2 648 aa10.04□□□□□ -0.8
CTNND1-217ENST00000527599 MENTQ9BUN1 341 aa10.04□□□□□ -0.8
CTNND1-217ENST00000527599 SLC46A2Q9BY10 475 aa10.04□□□□□ -0.8
CTNND1-217ENST00000527599 SLITRK6Q9H5Y7 841 aa10.04□□□□□ -0.8
CTNND1-217ENST00000527599 PCDHGA2Q9Y5H1 932 aa10.04□□□□□ -0.8
CTNND1-217ENST00000527599 ITGB1P05556 798 aa10.03□□□□□ -0.8
CTNND1-217ENST00000527599 ECHS1P30084 290 aa10.03□□□□□ -0.8
CTNND1-217ENST00000527599 INHBCP55103 352 aa10.03□□□□□ -0.8
CTNND1-217ENST00000527599 VRK3Q8IV63 474 aa10.03□□□□□ -0.8
CTNND1-217ENST00000527599 OR2I1PQ8NGU4 316 aa10.03□□□□□ -0.8
CTNND1-217ENST00000527599 STON2Q8WXE9 905 aa10.03□□□□□ -0.8
CTNND1-217ENST00000527599 CEP89Q96ST8 783 aa10.03□□□□□ -0.8
CTNND1-217ENST00000527599 LDAHQ9H6V9 325 aa10.03□□□□□ -0.8
CTNND1-217ENST00000527599 SPC25Q9HBM1 224 aa10.03□□□□□ -0.8
CTNND1-217ENST00000527599 SIK3Q9Y2K2 1263 aa10.03□□□□□ -0.8
CTNND1-217ENST00000527599 LPXNO60711 386 aa10.02□□□□□ -0.81
CTNND1-217ENST00000527599 NCR1O76036 304 aa10.02□□□□□ -0.81
CTNND1-217ENST00000527599 SLC6A9P48067 706 aa10.02□□□□□ -0.81
CTNND1-217ENST00000527599 KLF1Q13351 362 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-217ENST00000527599 NOMO1Q15155 1222 aa10.02□□□□□ -0.81
CTNND1-217ENST00000527599 INAVAQ3KP66 663 aa10.02□□□□□ -0.81
CTNND1-217ENST00000527599 PDCD4Q53EL6 469 aaKnown RBP10.02□□□□□ -0.81
CTNND1-217ENST00000527599 FAM102AQ5T9C2 384 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-217ENST00000527599 MBNL2Q5VZF2 373 aaKnown RBP10.02□□□□□ -0.81
CTNND1-217ENST00000527599 LRRC55Q6ZSA7 311 aa10.02□□□□□ -0.81
CTNND1-217ENST00000527599 PQLC1Q8N2U9 271 aa10.02□□□□□ -0.81
CTNND1-217ENST00000527599 CBARPQ8N350 705 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-217ENST00000527599 CNTD1Q8N815 330 aa10.02□□□□□ -0.81
CTNND1-217ENST00000527599 FAM193BQ96PV7 902 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-217ENST00000527599 DCLRE1CQ96SD1 692 aaKnown RBP10.02□□□□□ -0.81
CTNND1-217ENST00000527599 TMX1Q9H3N1 280 aa10.02□□□□□ -0.81
CTNND1-217ENST00000527599 ZNF277Q9NRM2 450 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-217ENST00000527599 SLC5A4Q9NY91 659 aa10.02□□□□□ -0.81
CTNND1-217ENST00000527599 POGKQ9P215 609 aa10.02□□□□□ -0.81
CTNND1-217ENST00000527599 GPR45Q9Y5Y3 372 aa10.02□□□□□ -0.81
CTNND1-217ENST00000527599 CENPVL1A0A0U1RR11 272 aa10.01□□□□□ -0.81
CTNND1-217ENST00000527599 GSPT1P15170 499 aaKnown RBP10.01□□□□□ -0.81
CTNND1-217ENST00000527599 GUCY1A2P33402 732 aa10.01□□□□□ -0.81
CTNND1-217ENST00000527599 PROKR1Q8TCW9 393 aa10.01□□□□□ -0.81
CTNND1-217ENST00000527599 AKIP1Q9NQ31 210 aa10.01□□□□□ -0.81
CTNND1-217ENST00000527599 DKK2Q9UBU2 259 aa10.01□□□□□ -0.81
CTNND1-217ENST00000527599 ATP8A1Q9Y2Q0 1164 aa10.01□□□□□ -0.81
CTNND1-217ENST00000527599 WDR33Q9C0J8 1336 aaKnown RBP10.01□□□□□ -0.81
CTNND1-217ENST00000527599 A0A087X1B8 175 aa10□□□□□ -0.81
CTNND1-217ENST00000527599 DRGXA6NNA5 263 aa10□□□□□ -0.81
CTNND1-217ENST00000527599 PJA2O43164 708 aa10□□□□□ -0.81
CTNND1-217ENST00000527599 RBP3P10745 1247 aa10□□□□□ -0.81
CTNND1-217ENST00000527599 AGXTP21549 392 aa10□□□□□ -0.81
CTNND1-217ENST00000527599 SLC5A3P53794 718 aa10□□□□□ -0.81
CTNND1-217ENST00000527599 CLRN1P58418 232 aa10□□□□□ -0.81
CTNND1-217ENST00000527599 AFMIDQ63HM1 303 aa10□□□□□ -0.81
CTNND1-217ENST00000527599 SYNE4Q8N205 404 aa10□□□□□ -0.81
CTNND1-217ENST00000527599 MYEOVQ96EZ4 313 aa10□□□□□ -0.81
CTNND1-217ENST00000527599 PRRX2Q99811 253 aa10□□□□□ -0.81
CTNND1-217ENST00000527599 TTPALQ9BTX7 342 aa10□□□□□ -0.81
CTNND1-217ENST00000527599 ADI1Q9BV57 179 aa10□□□□□ -0.81
CTNND1-217ENST00000527599 MCM8Q9UJA3 840 aa10□□□□□ -0.81
CTNND1-217ENST00000527599 FOXN1O15353 648 aa9.99□□□□□ -0.81
CTNND1-217ENST00000527599 ABHD16AO95870 558 aa9.99□□□□□ -0.81
CTNND1-217ENST00000527599 LAG3P18627 525 aa9.99□□□□□ -0.81
CTNND1-217ENST00000527599 FPR1P21462 350 aa9.99□□□□□ -0.81
CTNND1-217ENST00000527599 CHN2P52757 468 aa9.99□□□□□ -0.81
CTNND1-217ENST00000527599 SP140Q13342 867 aa9.99□□□□□ -0.81
CTNND1-217ENST00000527599 TIGD2Q4W5G0 525 aa9.99□□□□□ -0.81
CTNND1-217ENST00000527599 CRB2Q5IJ48 1285 aa9.99□□□□□ -0.81
CTNND1-217ENST00000527599 MRGPRGQ86SM5 289 aa9.99□□□□□ -0.81
CTNND1-217ENST00000527599 ZFP28Q8NHY6 868 aa9.99□□□□□ -0.81
CTNND1-217ENST00000527599 UHRF1Q96T88 793 aaPredicted RBP9.99□□□□□ -0.81
CTNND1-217ENST00000527599 AGAP2Q99490 1192 aa9.99□□□□□ -0.81
CTNND1-217ENST00000527599 WASHC2AQ641Q2 1341 aa9.99□□□□□ -0.81
CTNND1-217ENST00000527599 TRIM75PA6NK02 468 aa9.98□□□□□ -0.81
CTNND1-217ENST00000527599 TMEM200CA6NKL6 621 aa9.98□□□□□ -0.81
CTNND1-217ENST00000527599 MGAT1P26572 445 aa9.98□□□□□ -0.81
CTNND1-217ENST00000527599 MGAT2Q10469 447 aa9.98□□□□□ -0.81
CTNND1-217ENST00000527599 BEAN1Q3B7T3 259 aa9.98□□□□□ -0.81
CTNND1-217ENST00000527599 ATXN7L2Q5T6C5 722 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-217ENST00000527599 LAIR1Q6GTX8 287 aa9.98□□□□□ -0.81
CTNND1-217ENST00000527599 DMRT1Q9Y5R6 373 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms