RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 PRPF31Q8WWY3 499 aaKnown RBP12.04□□□□□ -0.48
CTSB-212ENST00000526645 ZFP42Q96MM3 310 aa12.04□□□□□ -0.48
CTSB-212ENST00000526645 SH2D3AQ9BRG2 576 aa12.04□□□□□ -0.48
CTSB-212ENST00000526645 C22orf23Q9BZE7 217 aa12.04□□□□□ -0.48
CTSB-212ENST00000526645 TRIM6Q9C030 488 aaPredicted RBP12.04□□□□□ -0.48
CTSB-212ENST00000526645 LSG1Q9H089 658 aaKnown RBP12.04□□□□□ -0.48
CTSB-212ENST00000526645 CSRNP2Q9H175 543 aa12.04□□□□□ -0.48
CTSB-212ENST00000526645 DHX33Q9H6R0 707 aaKnown RBP12.04□□□□□ -0.48
CTSB-212ENST00000526645 MINDY3Q9H8M7 445 aa12.04□□□□□ -0.48
CTSB-212ENST00000526645 HEBP1Q9NRV9 189 aa12.04□□□□□ -0.48
CTSB-212ENST00000526645 POLIQ9UNA4 740 aa12.04□□□□□ -0.48
CTSB-212ENST00000526645 KLF18A0A0U1RQI7 1052 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 CCL16O15467 120 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 TSPAN1O60635 241 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 TADA2AO75478 443 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 SRGAP2CP0DJJ0 459 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 CDC27P30260 824 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 LAMTOR4Q0VGL1 99 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 ELAVL2Q12926 359 aaKnown RBP12.03□□□□□ -0.48
CTSB-212ENST00000526645 COL9A2Q14055 689 aaPredicted RBP12.03□□□□□ -0.48
CTSB-212ENST00000526645 SIM2Q14190 667 aaPredicted RBP12.03□□□□□ -0.48
CTSB-212ENST00000526645 HSP90AA2PQ14568 343 aaPredicted RBP12.03□□□□□ -0.48
CTSB-212ENST00000526645 NECTIN1Q15223 517 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 PSMD5Q16401 504 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 LPAL2Q16609 132 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 Q4G0T1 1027 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 RTP2Q5QGT7 225 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 PRSS55Q6UWB4 352 aaPredicted RBP12.03□□□□□ -0.48
CTSB-212ENST00000526645 SLC7A14Q8TBB6 771 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 ELSPBP1Q96BH3 223 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 CLSTN3Q9BQT9 956 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 TTPALQ9BTX7 342 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 EIF2AQ9BY44 585 aaKnown RBP12.03□□□□□ -0.48
CTSB-212ENST00000526645 AVENQ9NQS1 362 aaPredicted RBP12.03□□□□□ -0.48
CTSB-212ENST00000526645 BRPF3Q9ULD4 1205 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 COL4A2P08572 1712 aa12.03□□□□□ -0.48
CTSB-212ENST00000526645 ATRXP46100 2492 aa12.02□□□□□ -0.48
CTSB-212ENST00000526645 KCNA4P22459 653 aa12.02□□□□□ -0.49
CTSB-212ENST00000526645 ACAP1Q15027 740 aa12.02□□□□□ -0.49
CTSB-212ENST00000526645 PLA2G4FQ68DD2 849 aa12.02□□□□□ -0.49
CTSB-212ENST00000526645 MOXD1Q6UVY6 613 aa12.02□□□□□ -0.49
CTSB-212ENST00000526645 ZNF687Q8N1G0 1237 aa12.02□□□□□ -0.49
CTSB-212ENST00000526645 RNF149Q8NC42 400 aa12.02□□□□□ -0.49
CTSB-212ENST00000526645 RNF39Q9H2S5 420 aa12.02□□□□□ -0.49
CTSB-212ENST00000526645 TRPV5Q9NQA5 729 aa12.02□□□□□ -0.49
CTSB-212ENST00000526645 SH2B1Q9NRF2 756 aaPredicted RBP12.02□□□□□ -0.49
CTSB-212ENST00000526645 MIOSQ9NXC5 875 aa12.02□□□□□ -0.49
CTSB-212ENST00000526645 NDRG2Q9UN36 371 aaKnown RBP12.02□□□□□ -0.49
CTSB-212ENST00000526645 MRPS23Q9Y3D9 190 aaKnown RBP12.02□□□□□ -0.49
CTSB-212ENST00000526645 HES2Q9Y543 173 aa12.02□□□□□ -0.49
CTSB-212ENST00000526645 NID2Q14112 1375 aa12.02□□□□□ -0.49
CTSB-212ENST00000526645 SHISA7A6NL88 538 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 ADAMTS3O15072 1205 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 PRPF3O43395 683 aaKnown RBP12.01□□□□□ -0.49
CTSB-212ENST00000526645 PAPSS2O95340 614 aaPredicted RBP12.01□□□□□ -0.49
CTSB-212ENST00000526645 PROS1P07225 676 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 QARSP47897 775 aaKnown RBP12.01□□□□□ -0.49
CTSB-212ENST00000526645 EXOSC10Q01780 885 aaKnown RBP12.01□□□□□ -0.49
CTSB-212ENST00000526645 AKAP17AQ02040 695 aaKnown RBP12.01□□□□□ -0.49
CTSB-212ENST00000526645 POU5F1BQ06416 359 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 TUSC3Q13454 348 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 RAB33AQ14088 237 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 TFDP1Q14186 410 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 MXD4Q14582 209 aaPredicted RBP12.01□□□□□ -0.49
CTSB-212ENST00000526645 AXDND1Q5T1B0 1012 aaPredicted RBP12.01□□□□□ -0.49
CTSB-212ENST00000526645 C1orf228Q6PIY5 440 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 DHX32Q7L7V1 743 aaKnown RBP12.01□□□□□ -0.49
CTSB-212ENST00000526645 FERMT3Q86UX7 667 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
CTSB-212ENST00000526645 GSTCDQ8NEC7 633 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 LNX1Q8TBB1 728 aaPredicted RBP12.01□□□□□ -0.49
CTSB-212ENST00000526645 IRF7Q92985 503 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 TMEM143Q96AN5 459 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 MSANTD3Q96H12 275 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 CEP170P1Q96L14 293 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 APOL6Q9BWW8 343 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 NXF3Q9H4D5 531 aaKnown RBP12.01□□□□□ -0.49
CTSB-212ENST00000526645 BRD9Q9H8M2 597 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 DNMT3BQ9UBC3 853 aaKnown RBP12.01□□□□□ -0.49
CTSB-212ENST00000526645 ARID2Q68CP9 1835 aa12.01□□□□□ -0.49
CTSB-212ENST00000526645 CYP3A7-CYP3A51PA0A087WV96 503 aa12□□□□□ -0.49
CTSB-212ENST00000526645 EDIL3O43854 480 aa12□□□□□ -0.49
CTSB-212ENST00000526645 GDF9O60383 454 aa12□□□□□ -0.49
CTSB-212ENST00000526645 CYP3A7P24462 503 aa12□□□□□ -0.49
CTSB-212ENST00000526645 ADD1P35611 737 aaKnown RBP12□□□□□ -0.49
CTSB-212ENST00000526645 CXCL12P48061 93 aa12□□□□□ -0.49
CTSB-212ENST00000526645 NPEPPSP55786 919 aa12□□□□□ -0.49
CTSB-212ENST00000526645 PTENP60484 403 aa12□□□□□ -0.49
CTSB-212ENST00000526645 EMC2Q15006 297 aa12□□□□□ -0.49
CTSB-212ENST00000526645 AASDHQ4L235 1098 aaPredicted RBP12□□□□□ -0.49
CTSB-212ENST00000526645 N4BP2L1Q5TBK1 243 aaPredicted RBP12□□□□□ -0.49
CTSB-212ENST00000526645 FAM171A1Q5VUB5 890 aa12□□□□□ -0.49
CTSB-212ENST00000526645 SLC27A1Q6PCB7 646 aa12□□□□□ -0.49
CTSB-212ENST00000526645 PDZRN4Q6ZMN7 1036 aaPredicted RBP12□□□□□ -0.49
CTSB-212ENST00000526645 OTUD6AQ7L8S5 288 aa12□□□□□ -0.49
CTSB-212ENST00000526645 LONP2Q86WA8 852 aa12□□□□□ -0.49
CTSB-212ENST00000526645 C12orf50Q8NA57 414 aaPredicted RBP12□□□□□ -0.49
CTSB-212ENST00000526645 ETNPPLQ8TBG4 499 aa12□□□□□ -0.49
CTSB-212ENST00000526645 TBCKQ8TEA7 893 aa12□□□□□ -0.49
CTSB-212ENST00000526645 ING5Q8WYH8 240 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms