RNA–Protein interactions for RNA: ENST00000526163.5

NXF1-203, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-203ENST00000526163 GDPD2Q9HCC8 539 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 SNTG2Q9NY99 539 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 SERTAD1Q9UHV2 236 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 CITO14578 2027 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 CHD9Q3L8U1 2897 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 GRM6O15303 877 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 ZC3H11AO75152 810 aaKnown RBP eCLIP12.48□□□□□ -0.41
NXF1-203ENST00000526163 RECQL4O94761 1208 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 GCNT3O95395 438 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 POMCP01189 267 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 GALTP07902 379 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 AFMP43652 599 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 DSC1Q08554 894 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 COASYQ13057 564 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 POSTNQ15063 836 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 TIGD5Q53EQ6 642 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 ZC2HC1CQ53FD0 456 aaPredicted RBP12.48□□□□□ -0.41
NXF1-203ENST00000526163 L1TD1Q5T7N2 865 aaKnown RBP12.48□□□□□ -0.41
NXF1-203ENST00000526163 KANK3Q6NY19 840 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 UNC13DQ70J99 1090 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 COLGALT2Q8IYK4 626 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 SLC39A11Q8N1S5 342 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 GSTCDQ8NEC7 633 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 PAGE5Q96GU1 130 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 ZFP42Q96MM3 310 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 ACAP3Q96P50 834 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 ACCSQ96QU6 501 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 TMEM206Q9H813 350 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 ALG13Q9NP73 1137 aaKnown RBP12.48□□□□□ -0.41
NXF1-203ENST00000526163 ANKFY1Q9P2R3 1169 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 HCSTQ9UBK5 93 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.48□□□□□ -0.41
NXF1-203ENST00000526163 STYXL1Q9Y6J8 313 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 TRIP11Q15643 1979 aa12.48□□□□□ -0.41
NXF1-203ENST00000526163 NCOR1O75376 2440 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 PLXNA4Q9HCM2 1894 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 A0A0B4J269 797 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 EIF3DO15371 548 aaKnown RBP eCLIP12.47□□□□□ -0.41
NXF1-203ENST00000526163 NCK2O43639 380 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 DDHD2O94830 711 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 ZNF202O95125 648 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 THP07101 528 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 CLTAP09496 248 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 MATR3P43243 847 aaKnown RBP eCLIP12.47□□□□□ -0.411e-14■■■■■ 51.7
NXF1-203ENST00000526163 SCNN1GP51170 649 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 AFF1P51825 1210 aaKnown RBP12.47□□□□□ -0.41
NXF1-203ENST00000526163 POU5F1Q01860 360 aaKnown RBP12.47□□□□□ -0.41
NXF1-203ENST00000526163 EHHADHQ08426 723 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 BMS1Q14692 1282 aaKnown RBP12.47□□□□□ -0.41
NXF1-203ENST00000526163 XKR4Q5GH76 650 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 ALKAL1Q6UXT8 129 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 ZBTB33Q86T24 672 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 ZNF280BQ86YH2 543 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 POF1BQ8WVV4 589 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 PPP2R3CQ969Q6 453 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 TMEM169Q96HH4 297 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 ZBTB45Q96K62 511 aaPredicted RBP12.47□□□□□ -0.41
NXF1-203ENST00000526163 TSPAN18Q96SJ8 248 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 GBP3Q9H0R5 595 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 PLEKHA5Q9HAU0 1116 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 TLR9Q9NR96 1032 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 MIOSQ9NXC5 875 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 KLK14Q9P0G3 267 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 TBC1D7Q9P0N9 293 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 FAN1Q9Y2M0 1017 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 GDAQ9Y2T3 454 aa12.47□□□□□ -0.41
NXF1-203ENST00000526163 CHD7Q9P2D1 2997 aa12.46□□□□□ -0.41
NXF1-203ENST00000526163 OGTO15294 1046 aa12.46□□□□□ -0.41
NXF1-203ENST00000526163 SLC11A1P49279 550 aa12.46□□□□□ -0.41
NXF1-203ENST00000526163 PSMD2Q13200 908 aa12.46□□□□□ -0.41
NXF1-203ENST00000526163 TUSC3Q13454 348 aa12.46□□□□□ -0.41
NXF1-203ENST00000526163 CUL4BQ13620 913 aa12.46□□□□□ -0.41
NXF1-203ENST00000526163 CAMK1Q14012 370 aa12.46□□□□□ -0.41
NXF1-203ENST00000526163 FAM26FQ5R3K3 315 aa12.46□□□□□ -0.41
NXF1-203ENST00000526163 KRBA2Q6ZNG9 492 aa12.46□□□□□ -0.41
NXF1-203ENST00000526163 DDX53Q86TM3 631 aaKnown RBP12.46□□□□□ -0.41
NXF1-203ENST00000526163 CCDC47Q96A33 483 aaKnown RBP12.46□□□□□ -0.41
NXF1-203ENST00000526163 IGSF21Q96ID5 467 aa12.46□□□□□ -0.41
NXF1-203ENST00000526163 IPO9Q96P70 1041 aaKnown RBP12.46□□□□□ -0.41
NXF1-203ENST00000526163 COLEC11Q9BWP8 271 aa12.46□□□□□ -0.41
NXF1-203ENST00000526163 BLZF1Q9H2G9 400 aa12.46□□□□□ -0.41
NXF1-203ENST00000526163 GOLPH3LQ9H4A5 285 aa12.46□□□□□ -0.41
NXF1-203ENST00000526163 NSUN3Q9H649 340 aaKnown RBP12.46□□□□□ -0.41
NXF1-203ENST00000526163 SLC38A7Q9NVC3 462 aa12.46□□□□□ -0.41
NXF1-203ENST00000526163 DNAJB4Q9UDY4 337 aa12.46□□□□□ -0.41
NXF1-203ENST00000526163 MYO7AQ13402 2215 aa12.46□□□□□ -0.42
NXF1-203ENST00000526163 UBE4BO95155 1302 aa12.45□□□□□ -0.42
NXF1-203ENST00000526163 FSD2A1L4K1 749 aa12.45□□□□□ -0.42
NXF1-203ENST00000526163 PTGESO14684 152 aa12.45□□□□□ -0.42
NXF1-203ENST00000526163 NRP1O14786 923 aa12.45□□□□□ -0.42
NXF1-203ENST00000526163 KIAA0391O15091 583 aaKnown RBP12.45□□□□□ -0.42
NXF1-203ENST00000526163 MYBP10242 640 aa12.45□□□□□ -0.42
NXF1-203ENST00000526163 KCNE1P15382 129 aa12.45□□□□□ -0.42
NXF1-203ENST00000526163 DNAJB1P25685 340 aa12.45□□□□□ -0.42
NXF1-203ENST00000526163 PBX3P40426 434 aa12.45□□□□□ -0.42
NXF1-203ENST00000526163 CASP5P51878 434 aa12.45□□□□□ -0.42
NXF1-203ENST00000526163 OSTNP61366 133 aa12.45□□□□□ -0.42
NXF1-203ENST00000526163 SNRPFP62306 86 aaKnown RBP12.45□□□□□ -0.42
NXF1-203ENST00000526163 FAM160A1Q05DH4 1040 aa12.45□□□□□ -0.42
NXF1-203ENST00000526163 SLC39A4Q6P5W5 647 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms