RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 PTGESO14684 152 aa20.31■□□□□ 0.84
TSPAN4-215ENST00000525334 SPTLC2O15270 562 aa20.31■□□□□ 0.84
TSPAN4-215ENST00000525334 FAM13AO94988 1023 aa20.31■□□□□ 0.84
TSPAN4-215ENST00000525334 CXCL14O95715 111 aa20.31■□□□□ 0.84
TSPAN4-215ENST00000525334 CTSAP10619 480 aa20.31■□□□□ 0.84
TSPAN4-215ENST00000525334 ZNF131P52739 623 aa20.31■□□□□ 0.84
TSPAN4-215ENST00000525334 STRN3Q13033 797 aa20.31■□□□□ 0.84
TSPAN4-215ENST00000525334 BMS1Q14692 1282 aaKnown RBP20.31■□□□□ 0.84
TSPAN4-215ENST00000525334 FOXD4L6Q3SYB3 417 aaPredicted RBP20.31■□□□□ 0.84
TSPAN4-215ENST00000525334 RRAGBQ5VZM2 374 aa20.31■□□□□ 0.84
TSPAN4-215ENST00000525334 FOXD4L3Q6VB84 417 aaPredicted RBP20.31■□□□□ 0.84
TSPAN4-215ENST00000525334 CEP120Q8N960 986 aa20.31■□□□□ 0.84
TSPAN4-215ENST00000525334 MSLNLQ96KJ4 702 aa20.31■□□□□ 0.84
TSPAN4-215ENST00000525334 DAXXQ9UER7 740 aaPredicted RBP20.31■□□□□ 0.84
TSPAN4-215ENST00000525334 CD207Q9UJ71 328 aa20.31■□□□□ 0.84
TSPAN4-215ENST00000525334 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.3■□□□□ 0.84
TSPAN4-215ENST00000525334 ABLIM1O14639 778 aa20.3■□□□□ 0.84
TSPAN4-215ENST00000525334 TBCAO75347 108 aaKnown RBP20.3■□□□□ 0.84
TSPAN4-215ENST00000525334 NR1I2O75469 434 aa20.3■□□□□ 0.84
TSPAN4-215ENST00000525334 PROZP22891 400 aa20.3■□□□□ 0.84
TSPAN4-215ENST00000525334 KCNC3Q14003 757 aa20.3■□□□□ 0.84
TSPAN4-215ENST00000525334 ZBTB33Q86T24 672 aa20.3■□□□□ 0.84
TSPAN4-215ENST00000525334 MYCT1Q8N699 235 aa20.3■□□□□ 0.84
TSPAN4-215ENST00000525334 PARVGQ9HBI0 331 aa20.3■□□□□ 0.84
TSPAN4-215ENST00000525334 CD320Q9NPF0 282 aa20.3■□□□□ 0.84
TSPAN4-215ENST00000525334 STK39Q9UEW8 545 aa20.3■□□□□ 0.84
TSPAN4-215ENST00000525334 A0A087X0B3 334 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 H0YCG3 227 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 MBTPS2O43462 519 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 PPP6R2O75170 966 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 YEATS4O95619 227 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 GRM5P41594 1212 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 TUSC3Q13454 348 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 SMAD4Q13485 552 aaKnown RBP20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 PTPN14Q15678 1187 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 LLGL2Q6P1M3 1020 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 MPZL3Q6UWV2 235 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 HAUS6Q7Z4H7 955 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 KCNN1Q92952 543 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 TCHPQ9BT92 498 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 ZHX3Q9H4I2 956 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 CACNG4Q9UBN1 327 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 FAM50BQ9Y247 325 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 IRAK3Q9Y616 596 aa20.29■□□□□ 0.84
TSPAN4-215ENST00000525334 K7ENM7 598 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 TRAK2O60296 914 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 CLASP2O75122 1294 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 BRD1O95696 1058 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 EFEMP2O95967 443 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 SOD2P04179 222 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 THP07101 528 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 MCF2P10911 925 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 OSTNP61366 133 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 COASYQ13057 564 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 NAB2Q15742 525 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 ZPBP2Q6X784 338 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 TMEM184AQ6ZMB5 413 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 CCDC73Q6ZRK6 1079 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 SMRP1Q8NCR6 262 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 RABGGTAQ92696 567 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 ZBTB45Q96K62 511 aaPredicted RBP20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 PAAF1Q9BRP4 392 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 HERC2P3Q9BVR0 1158 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 CCDC94Q9BW85 323 aaPredicted RBP20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 COLEC11Q9BWP8 271 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 PANK2Q9BZ23 570 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 ANKFY1Q9P2R3 1169 aa20.28■□□□□ 0.84
TSPAN4-215ENST00000525334 CASTOR2A6NHX0 329 aa20.27■□□□□ 0.84
TSPAN4-215ENST00000525334 TOM1L1O75674 476 aa20.27■□□□□ 0.84
TSPAN4-215ENST00000525334 SRGAP2BP0DMP2 458 aa20.27■□□□□ 0.84
TSPAN4-215ENST00000525334 HARSP12081 509 aaKnown RBP20.27■□□□□ 0.84
TSPAN4-215ENST00000525334 STAT6P42226 847 aa20.27■□□□□ 0.84
TSPAN4-215ENST00000525334 SMAD2Q15796 467 aaKnown RBP20.27■□□□□ 0.84
TSPAN4-215ENST00000525334 GLRA4Q5JXX5 417 aa20.27■□□□□ 0.84
TSPAN4-215ENST00000525334 SV2BQ7L1I2 683 aa20.27■□□□□ 0.84
TSPAN4-215ENST00000525334 DYMQ7RTS9 669 aa20.27■□□□□ 0.84
TSPAN4-215ENST00000525334 TAS1R1Q7RTX1 841 aa20.27■□□□□ 0.84
TSPAN4-215ENST00000525334 RNF168Q8IYW5 571 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-215ENST00000525334 FIZ1Q96SL8 496 aa20.27■□□□□ 0.84
TSPAN4-215ENST00000525334 HCFC2Q9Y5Z7 792 aa20.27■□□□□ 0.84
TSPAN4-215ENST00000525334 MYMKA6NI61 221 aa20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 URODP06132 367 aa20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 SCP2P22307 547 aa20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 YARSP54577 528 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 HSP90AA2PQ14568 343 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 NOLC1Q14978 699 aaKnown RBP eCLIP20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 ANKRD54Q6NXT1 300 aa20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 GJD3Q8N144 294 aa20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 PDILTQ8N807 584 aa20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 TMEM87AQ8NBN3 555 aa20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 DDX12PQ92771 950 aa20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 BICD1Q96G01 975 aa20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 PPP1R10Q96QC0 940 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 TOPORSQ9NS56 1045 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 PRKAG3Q9UGI9 489 aa20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 ADAM28Q9UKQ2 775 aa20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 TBX20Q9UMR3 447 aa20.26■□□□□ 0.83
TSPAN4-215ENST00000525334 C2CD2LO14523 706 aa20.25■□□□□ 0.83
TSPAN4-215ENST00000525334 CUTAO60888 179 aa20.25■□□□□ 0.83
TSPAN4-215ENST00000525334 LILRB3O75022 631 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms