RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 ACCSLQ4AC99 568 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 SLC30A10Q6XR72 485 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 CD302Q8IX05 232 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 C7orf25Q9BPX7 421 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 TINF2Q9BSI4 451 aa18.17■□□□□ 0.5
BEST1-203ENST00000524877 LCP1P13796 627 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 KRT15P19012 456 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 KLRC1P26715 233 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 EHHADHQ08426 723 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 PDCD7Q8N8D1 485 aaKnown RBP18.16■□□□□ 0.5
BEST1-203ENST00000524877 RIOX1Q9H6W3 641 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 NHEJ1Q9H9Q4 299 aaPredicted RBP18.16■□□□□ 0.5
BEST1-203ENST00000524877 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.16■□□□□ 0.5
BEST1-203ENST00000524877 DAAM1Q9Y4D1 1078 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 MYBL1P10243 752 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 VPS41P49754 854 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 EFHC2Q5JST6 749 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 TRIM56Q9BRZ2 755 aaKnown RBP18.16■□□□□ 0.5
BEST1-203ENST00000524877 PRG3Q9Y2Y8 225 aaPredicted RBP18.16■□□□□ 0.5
BEST1-203ENST00000524877 SH3BP1Q9Y3L3 701 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 RAD51Q06609 339 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 FYB2Q5VWT5 728 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 LMBRD2Q68DH5 695 aaPredicted RBP18.16■□□□□ 0.5
BEST1-203ENST00000524877 ADAT2Q7Z6V5 191 aaKnown RBP18.16■□□□□ 0.5
BEST1-203ENST00000524877 USP6NLQ92738 828 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.16■□□□□ 0.5
BEST1-203ENST00000524877 ARP10275 920 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 PSMC1P62191 440 aaKnown RBP18.16■□□□□ 0.5
BEST1-203ENST00000524877 DENND2CQ68D51 928 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 LMO7Q8WWI1 1683 aa18.16■□□□□ 0.5
BEST1-203ENST00000524877 TAF6P49848 677 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 ST8SIA6P61647 398 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 SATB1Q01826 763 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 THOC5Q13769 683 aaKnown RBP18.15■□□□□ 0.5
BEST1-203ENST00000524877 SH3GL3Q99963 347 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 RANBP17Q9H2T7 1088 aaKnown RBP18.15■□□□□ 0.5
BEST1-203ENST00000524877 MOCS2O96007 188 aaPredicted RBP18.15■□□□□ 0.5
BEST1-203ENST00000524877 NME3Q13232 169 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 MOSPD1Q9UJG1 213 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 VTNP04004 478 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 CYP11B2P19099 503 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 NAMPTP43490 491 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 TAF2Q6P1X5 1199 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 VPS52Q8N1B4 723 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 ZNF512Q96ME7 567 aaPredicted RBP18.15■□□□□ 0.5
BEST1-203ENST00000524877 GOLPH3LQ9H4A5 285 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 SLC24A3Q9HC58 644 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 HOMER3Q9NSC5 361 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 FAM208AQ9UK61 1670 aaKnown RBP18.15■□□□□ 0.5
BEST1-203ENST00000524877 MROH7Q68CQ1 1323 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 C2CD2LO14523 706 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 NPM3O75607 178 aaKnown RBP18.15■□□□□ 0.5
BEST1-203ENST00000524877 DGKZQ13574 1117 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 HHATQ5VTY9 493 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 CATSPER3Q86XQ3 398 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 KLRG1Q96E93 195 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 SETD4Q9NVD3 440 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 AKAP12Q02952 1782 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 CYP2C19P33261 490 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 CLCN3P51790 818 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 SNRNP35Q16560 246 aaKnown RBP18.15■□□□□ 0.5
BEST1-203ENST00000524877 SDE2Q6IQ49 451 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 CCHCR1Q8TD31 782 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 KANSL3Q9P2N6 904 aa18.15■□□□□ 0.5
BEST1-203ENST00000524877 NPEPPSP55786 919 aa18.14■□□□□ 0.5
BEST1-203ENST00000524877 N4BP2L2Q92802 583 aaPredicted RBP18.14■□□□□ 0.5
BEST1-203ENST00000524877 MAPRE1Q15691 268 aaKnown RBP18.14■□□□□ 0.49
BEST1-203ENST00000524877 KIZQ2M2Z5 673 aa18.14■□□□□ 0.49
BEST1-203ENST00000524877 SCYL1Q96KG9 808 aa18.14■□□□□ 0.49
BEST1-203ENST00000524877 VCX3AQ9NNX9 186 aa18.14■□□□□ 0.49
BEST1-203ENST00000524877 CNOT8Q9UFF9 292 aaKnown RBP18.14■□□□□ 0.49
BEST1-203ENST00000524877 BAIAP2L1Q9UHR4 511 aa18.14■□□□□ 0.49
BEST1-203ENST00000524877 I3L4J1 428 aa18.14■□□□□ 0.49
BEST1-203ENST00000524877 SETDB1Q15047 1291 aa18.14■□□□□ 0.49
BEST1-203ENST00000524877 PPP6R3Q5H9R7 873 aaPredicted RBP18.14■□□□□ 0.49
BEST1-203ENST00000524877 DDX53Q86TM3 631 aaKnown RBP18.14■□□□□ 0.49
BEST1-203ENST00000524877 PRPF31Q8WWY3 499 aaKnown RBP18.14■□□□□ 0.49
BEST1-203ENST00000524877 EVI5O60447 810 aa18.14■□□□□ 0.49
BEST1-203ENST00000524877 NCOA4Q13772 614 aa18.14■□□□□ 0.49
BEST1-203ENST00000524877 IFT43Q96FT9 208 aa18.14■□□□□ 0.49
BEST1-203ENST00000524877 NMRK2Q9NPI5 230 aa18.14■□□□□ 0.49
BEST1-203ENST00000524877 ZC4H2Q9NQZ6 224 aa18.14■□□□□ 0.49
BEST1-203ENST00000524877 TRIM49P0CI25 452 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 TRIM49CP0CI26 452 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 RANBP1P43487 201 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 ATP8B4Q8TF62 1192 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 SP110Q9HB58 689 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 CARNS1A5YM72 827 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 ZBED1O96006 694 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 ADCYAP1R1P41586 468 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 RHBDL3P58872 404 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 SHC4Q6S5L8 630 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 NOP9Q86U38 636 aaKnown RBP18.13■□□□□ 0.49
BEST1-203ENST00000524877 RIC1Q4ADV7 1423 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 LGALS16A8MUM7 142 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 TRIM9Q9C026 710 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 CA12O43570 354 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 CREB3O43889 395 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 CPP00450 1065 aa18.13■□□□□ 0.49
BEST1-203ENST00000524877 SEC23AQ15436 765 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms