RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 ENTPD7Q9NQZ7 604 aa22.91■■□□□ 1.26
TRAPPC9-215ENST00000524162 TOPORSQ9NS56 1045 aaPredicted RBP22.91■■□□□ 1.26
TRAPPC9-215ENST00000524162 CLDND1Q9NY35 253 aa22.91■■□□□ 1.26
TRAPPC9-215ENST00000524162 SNTG2Q9NY99 539 aa22.91■■□□□ 1.26
TRAPPC9-215ENST00000524162 FAM50BQ9Y247 325 aa22.91■■□□□ 1.26
TRAPPC9-215ENST00000524162 ATP6V1DQ9Y5K8 247 aa22.91■■□□□ 1.26
TRAPPC9-215ENST00000524162 PDCD11Q14690 1871 aaKnown RBP22.91■■□□□ 1.26
TRAPPC9-215ENST00000524162 THP07101 528 aa22.9■■□□□ 1.26
TRAPPC9-215ENST00000524162 GAP43P17677 238 aa22.9■■□□□ 1.26
TRAPPC9-215ENST00000524162 STAT6P42226 847 aa22.9■■□□□ 1.26
TRAPPC9-215ENST00000524162 TUSC3Q13454 348 aa22.9■■□□□ 1.26
TRAPPC9-215ENST00000524162 DHX8Q14562 1220 aaKnown RBP22.9■■□□□ 1.26
TRAPPC9-215ENST00000524162 ZNF568Q3ZCX4 644 aa22.9■■□□□ 1.26
TRAPPC9-215ENST00000524162 FAM178BQ8IXR5 827 aa22.9■■□□□ 1.26
TRAPPC9-215ENST00000524162 VPS52Q8N1B4 723 aa22.9■■□□□ 1.26
TRAPPC9-215ENST00000524162 HVCN1Q96D96 273 aa22.9■■□□□ 1.26
TRAPPC9-215ENST00000524162 DNAJC19Q96DA6 116 aa22.9■■□□□ 1.26
TRAPPC9-215ENST00000524162 CCDC94Q9BW85 323 aaPredicted RBP22.9■■□□□ 1.26
TRAPPC9-215ENST00000524162 COLEC11Q9BWP8 271 aa22.9■■□□□ 1.26
TRAPPC9-215ENST00000524162 SSX2IPQ9Y2D8 614 aa22.9■■□□□ 1.26
TRAPPC9-215ENST00000524162 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.9■■□□□ 1.26
TRAPPC9-215ENST00000524162 C2orf71A6NGG8 1288 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 PTGESO14684 152 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 NRIP1P48552 1158 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 CACNB1Q02641 598 aaPredicted RBP22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 MCL1Q07820 350 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 NAB2Q15742 525 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 E2F4Q16254 413 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 KYAT1Q16773 422 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 ALKAL1Q6UXT8 129 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 SPRYD3Q8NCJ5 442 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 BCL7CQ8WUZ0 217 aaPredicted RBP22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 DDX12PQ92771 950 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 PYM1Q9BRP8 204 aaKnown RBP22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 TNMDQ9H2S6 317 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 MAGEF1Q9HAY2 307 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 OLFML3Q9NRN5 406 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 MARCH5Q9NX47 278 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 TBX20Q9UMR3 447 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 USP20Q9Y2K6 914 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 ZDHHC9Q9Y397 364 aa22.89■■□□□ 1.25
TRAPPC9-215ENST00000524162 A0A087X0B3 334 aa22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 FRMD3A2A2Y4 597 aa22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 DLL1O00548 723 aa22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 SOD2P04179 222 aa22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 SRGAP2BP0DMP2 458 aa22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 KCNQ1P51787 676 aa22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 YARSP54577 528 aaKnown RBP22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 COASYQ13057 564 aa22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 CNNM4Q6P4Q7 775 aa22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 SHC4Q6S5L8 630 aa22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 IQUBQ8NA54 791 aa22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 MSLNLQ96KJ4 702 aa22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 TCHPQ9BT92 498 aa22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 VN1R3Q9BXE9 311 aa22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 KBTBD4Q9NVX7 518 aa22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 KLK14Q9P0G3 267 aa22.88■■□□□ 1.25
TRAPPC9-215ENST00000524162 GRXCR2A6NFK2 248 aa22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 MYMKA6NI61 221 aa22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 CLDN3O15551 220 aa22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 TBX10O75333 385 aa22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 C1RP00736 705 aa22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 OR1G1P47890 313 aa22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 DNM1Q05193 864 aaKnown RBP22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 NOLC1Q14978 699 aaKnown RBP eCLIP22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 FOXD4L5Q5VV16 416 aaPredicted RBP22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 PLPP4Q5VZY2 271 aa22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 MAP4K3Q8IVH8 894 aa22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 ADAMTS19Q8TE59 1207 aa22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 FOXD4L4Q8WXT5 416 aaPredicted RBP22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 ACAP3Q96P50 834 aa22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 TSPAN18Q96SJ8 248 aa22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 PCDHGC5Q9Y5F6 944 aa22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 C5orf42Q9H799 3197 aa22.87■■□□□ 1.25
TRAPPC9-215ENST00000524162 HIDE1A8MVS5 230 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 K7ENM7 598 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 LILRB3O75022 631 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 PPP1R37O75864 691 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 CXCL14O95715 111 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 GLP2RO95838 553 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 KCNE1P15382 129 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 GTF2F1P35269 517 aaKnown RBP eCLIP22.86■■□□□ 1.252e-7■■■■■ 33.7
TRAPPC9-215ENST00000524162 AMPD3Q01432 767 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 ALCAMQ13740 583 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 ZNF720Q7Z2F6 126 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 UROC1Q96N76 676 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 PPP1R10Q96QC0 940 aaKnown RBP22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 HERC2P3Q9BVR0 1158 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 STRA6Q9BX79 667 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 IGFLR1Q9H665 355 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 SLC38A7Q9NVC3 462 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 CLEC1BQ9P126 229 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 PCDHA7Q9UN72 937 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 GDAQ9Y2T3 454 aa22.86■■□□□ 1.25
TRAPPC9-215ENST00000524162 TMEM189-UBE2V1I3L0A0 370 aa22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 HOXB8P17481 243 aaPredicted RBP22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 ME1P48163 572 aa22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 KRT85P78386 507 aa22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 POU5F1Q01860 360 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms