RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	CHRD	Q9H2X0	955 aa		12.06	□□□□□ -0.48
SORBS3-222	ENST00000524057	SH3GLB2	Q9NR46	395 aa		12.06	□□□□□ -0.48
SORBS3-222	ENST00000524057	FNIP2	Q9P278	1114 aa		12.06	□□□□□ -0.48
SORBS3-222	ENST00000524057	LIMCH1	Q9UPQ0	1083 aa		12.06	□□□□□ -0.48
SORBS3-222	ENST00000524057	MRPS17	Q9Y2R5	130 aa	Known RBP	12.06	□□□□□ -0.48
SORBS3-222	ENST00000524057	SAMM50	Q9Y512	469 aa		12.06	□□□□□ -0.48
SORBS3-222	ENST00000524057	DOCK6	Q96HP0	2047 aa		12.06	□□□□□ -0.48
SORBS3-222	ENST00000524057	CNOT1	A5YKK6	2376 aa	Known RBP	12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	SOBP	A7XYQ1	873 aa		12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	WNT7A	O00755	349 aa		12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	FOXD2	O60548	495 aa	Predicted RBP	12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	LIMK1	P53667	647 aa		12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	SRSF5	Q13243	272 aa	Known RBP	12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	AP3B2	Q13367	1082 aa		12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	LRSAM1	Q6UWE0	723 aa		12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	UNQ6494/PRO21346	Q6UXR6	183 aa		12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	KSR1	Q8IVT5	923 aa		12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	TEX2	Q8IWB9	1127 aa		12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	DAGLB	Q8NCG7	672 aa		12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	GPR62	Q9BZJ7	368 aa		12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	RXFP3	Q9NSD7	469 aa		12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	MIOS	Q9NXC5	875 aa		12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	ORC3	Q9UBD5	711 aa	Predicted RBP	12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	MTCL1	Q9Y4B5	1905 aa	Known RBP	12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	CNTNAP2	Q9UHC6	1331 aa		12.05	□□□□□ -0.48
SORBS3-222	ENST00000524057	IGKV6-21	A0A0C4DH24	114 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	CPLX1	O14810	134 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	KCNK5	O95279	499 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	HOXA11	P31270	313 aa	Predicted RBP	12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	CIITA	P33076	1130 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	PRKCE	Q02156	737 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	DSC1	Q08554	894 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	PPP2R5D	Q14738	602 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	UGCG	Q16739	394 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	USP41	Q3LFD5	358 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	UBXN11	Q5T124	520 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	POTEH	Q6S545	545 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	ZNF410	Q86VK4	478 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	RHPN2	Q8IUC4	686 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	CCDC83	Q8IWF9	413 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	GPR65	Q8IYL9	337 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	REXO1	Q8N1G1	1221 aa	Known RBP	12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	GJA10	Q969M2	543 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	CEP89	Q96ST8	783 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	LMAN1L	Q9HAT1	526 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	C6orf50	Q9HD87	102 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	DISC1	Q9NRI5	854 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	SUCLA2	Q9P2R7	463 aa	Predicted RBP	12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	NDRG2	Q9UN36	371 aa	Known RBP	12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	PCDHA4	Q9UN74	947 aa		12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	MYH9	P35579	1960 aa	Known RBP	12.04	□□□□□ -0.48
SORBS3-222	ENST00000524057	CHURC1-FNTB	B4DL54	471 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	CCL16	O15467	120 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	EIF5B	O60841	1220 aa	Known RBP	12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	ECI2	O75521	394 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	HNRNPA1	P09651	372 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	CXCL12	P48061	93 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	FNTB	P49356	437 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	DNM2	P50570	870 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	CCR3	P51677	355 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	NLRP5	P59047	1200 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	SATB1	Q01826	763 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	RABEP1	Q15276	862 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	SF3A2	Q15428	464 aa	Known RBP	12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	PRSS55	Q6UWB4	352 aa	Predicted RBP	12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	NPAS3	Q8IXF0	933 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	TRIM22	Q8IYM9	498 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	BLID	Q8IZY5	108 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	FAM160A2	Q8N612	972 aa	Predicted RBP	12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	SMG8	Q8ND04	991 aa	Known RBP	12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	SH2D3A	Q9BRG2	576 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	COLEC11	Q9BWP8	271 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	NIFK	Q9BYG3	293 aa	Known RBP	12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	RNF39	Q9H2S5	420 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	IFT122	Q9HBG6	1241 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	AGPAT5	Q9NUQ2	364 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	TCEAL9	Q9UHQ7	104 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	FBXW11	Q9UKB1	542 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	POLI	Q9UNA4	740 aa		12.03	□□□□□ -0.48
SORBS3-222	ENST00000524057	WDFY3	Q8IZQ1	3526 aa		12.02	□□□□□ -0.48
SORBS3-222	ENST00000524057	TMEM150B	A6NC51	233 aa		12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	ARL5C	A6NH57	179 aa		12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	WDR64	B1ANS9	1081 aa		12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	MAN2B1	O00754	1011 aa		12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	STBD1	O95210	358 aa		12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	TDP2	O95551	362 aa		12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	NCL	P19338	710 aa	Known RBP	12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	GNA11	P29992	359 aa		12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	CNR2	P34972	360 aa		12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	AKAP17A	Q02040	695 aa	Known RBP	12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	NR5A1	Q13285	461 aa		12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	MTERF2	Q49AM1	385 aa		12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	AASDH	Q4L235	1098 aa	Predicted RBP	12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	PPM1L	Q5SGD2	360 aa		12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	STPG1	Q5TH74	334 aa		12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	TANGO2	Q6ICL3	276 aa		12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	FUT10	Q6P4F1	479 aa		12.02	□□□□□ -0.49
SORBS3-222	ENST00000524057	TBCK	Q8TEA7	893 aa		12.02	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms