RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	SLC19A1	P41440	591 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	PRKCI	P41743	596 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	ADCY7	P51828	1080 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	RTP1	P59025	263 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	RAB15	P59190	212 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	TNNC1	P63316	161 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	IK	Q13123	557 aa	Predicted RBP	8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	DRP2	Q13474	957 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	EDRF1	Q3B7T1	1238 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	ASPRV1	Q53RT3	343 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	TDRD12	Q587J7	1177 aa	Known RBP	8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	FAM26F	Q5R3K3	315 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	C10orf76	Q5T2E6	689 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	AGBL2	Q5U5Z8	902 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	SLFN13	Q68D06	897 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	SLFN11	Q7Z7L1	901 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	RNF180	Q86T96	592 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	LRRC47	Q8N1G4	583 aa	Known RBP	8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	ANKRD35	Q8N283	1001 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	RASGEF1C	Q8N431	466 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	DEFB123	Q8N688	67 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	MYCBPAP	Q8TBZ2	947 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	ACTRT1	Q8TDG2	376 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	SNX29	Q8TEQ0	813 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	CHURC1	Q8WUH1	139 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	SEC14L1	Q92503	715 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	HAS1	Q92839	578 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	PBK	Q96KB5	322 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	MBOAT7	Q96N66	472 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	FGFBP2	Q9BYJ0	223 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	SLC38A10	Q9HBR0	1119 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	RAVER2	Q9HCJ3	691 aa	Known RBP	8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	EPB41L5	Q9HCM4	733 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	LUC7L	Q9NQ29	371 aa	Known RBP	8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	SLC12A6	Q9UHW9	1150 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	STX8	Q9UNK0	236 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	PTPRF	P10586	1907 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	LOXHD1	Q8IVV2	1947 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	NCAN	O14594	1321 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	KDM3A	Q9Y4C1	1321 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033	EYS	Q5T1H1	3165 aa		8.48	□□□□□ -1.05
SPIDR-223	ENST00000524033		A0A087X0T9	212 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033		A0A0A6YYK5	440 aa	Predicted RBP	8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	NDUFAB1	O14561	156 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	FTCD	O95954	541 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	PGK1	P00558	417 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	KRT14	P02533	472 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	FAM228B	P0C875	321 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	ZNF865	P0CJ78	1059 aa	Predicted RBP	8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	AKR1A1	P14550	325 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	GCFC2	P16383	781 aa	Known RBP	8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	MDH1	P40925	334 aa	Known RBP	8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	TXK	P42681	527 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	OAZ1	P54368	228 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	GSC	P56915	257 aa	Predicted RBP	8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	GUCY2D	Q02846	1103 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	CUL1	Q13616	776 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	BYSL	Q13895	437 aa	Known RBP	8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	ASIC2	Q16515	512 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	NBPF20	Q3BBV1	942 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	SPDYC	Q5MJ68	293 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	MICALCL	Q6ZW33	695 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	DYM	Q7RTS9	669 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	CACNA2D4	Q7Z3S7	1137 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	GMCL1	Q96IK5	515 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	PSMB7	Q99436	277 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	KRT12	Q99456	494 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	NCAPG	Q9BPX3	1015 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	OCSTAMP	Q9BR26	566 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	PACSIN1	Q9BY11	444 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	TXLNGY	Q9BZA5	131 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	RAB34	Q9BZG1	259 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	GEMIN8	Q9NWZ8	242 aa	Known RBP	8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	SEC63	Q9UGP8	760 aa	Known RBP	8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	FBXO40	Q9UH90	709 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	FBXL5	Q9UKA1	691 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	PLAA	Q9Y263	795 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	SAMM50	Q9Y512	469 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	MGAM	O43451	1857 aa		8.47	□□□□□ -1.05
SPIDR-223	ENST00000524033	TRIOBP	Q9H2D6	2365 aa		8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	DNAJC25-GNG10	A0A024R161	153 aa		8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	ESYT3	A0FGR9	886 aa		8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	ATP9B	O43861	1147 aa		8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	PPP1R11	O60927	126 aa	Predicted RBP	8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	SNAI1	O95863	264 aa	Predicted RBP	8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	FAM107A	O95990	144 aa		8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	CYP11B2	P19099	503 aa		8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	VARS	P26640	1264 aa	Known RBP	8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	HSD17B3	P37058	310 aa		8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	MATR3	P43243	847 aa	Known RBP eCLIP	8.46	□□□□□ -1.06	2e-6	■■■■■ 27.8
SPIDR-223	ENST00000524033	STAT2	P52630	851 aa		8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	JAM2	P57087	298 aa		8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	POLR2F	P61218	127 aa	Known RBP	8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	POU5F1	Q01860	360 aa	Known RBP	8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	TLE2	Q04725	743 aa		8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	ACTN3	Q08043	901 aa	Predicted RBP	8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	BIRC3	Q13489	604 aa		8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	ACVR2B	Q13705	512 aa		8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	TRIM60	Q495X7	471 aa		8.46	□□□□□ -1.06
SPIDR-223	ENST00000524033	CCDC40	Q4G0X9	1142 aa		8.46	□□□□□ -1.06

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms