RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 FXR2P51116 673 aaKnown RBP eCLIP20.75■□□□□ 0.91
PTP4A3-206ENST00000524028 HMGN5P82970 282 aaKnown RBP20.75■□□□□ 0.91
PTP4A3-206ENST00000524028 TUSC3Q13454 348 aa20.75■□□□□ 0.91
PTP4A3-206ENST00000524028 HSP90AA2PQ14568 343 aaPredicted RBP20.75■□□□□ 0.91
PTP4A3-206ENST00000524028 NAB2Q15742 525 aa20.75■□□□□ 0.91
PTP4A3-206ENST00000524028 MAPK6Q16659 721 aa20.75■□□□□ 0.91
PTP4A3-206ENST00000524028 RTP2Q5QGT7 225 aa20.75■□□□□ 0.91
PTP4A3-206ENST00000524028 EEF1DP3Q658K8 133 aa20.75■□□□□ 0.91
PTP4A3-206ENST00000524028 LILRA6Q6PI73 481 aa20.75■□□□□ 0.91
PTP4A3-206ENST00000524028 GLYCTKQ8IVS8 523 aa20.75■□□□□ 0.91
PTP4A3-206ENST00000524028 HASPINQ8TF76 798 aa20.75■□□□□ 0.91
PTP4A3-206ENST00000524028 ZSCAN31Q96LW9 406 aaPredicted RBP20.75■□□□□ 0.91
PTP4A3-206ENST00000524028 KCNK12Q9HB15 430 aa20.75■□□□□ 0.91
PTP4A3-206ENST00000524028 WDR6Q9NNW5 1121 aaKnown RBP20.75■□□□□ 0.91
PTP4A3-206ENST00000524028 FNIP2Q9P278 1114 aa20.75■□□□□ 0.91
PTP4A3-206ENST00000524028 TADA2AO75478 443 aa20.74■□□□□ 0.91
PTP4A3-206ENST00000524028 RECQL4O94761 1208 aa20.74■□□□□ 0.91
PTP4A3-206ENST00000524028 PAPLNO95428 1278 aa20.74■□□□□ 0.91
PTP4A3-206ENST00000524028 MUTP22033 750 aa20.74■□□□□ 0.91
PTP4A3-206ENST00000524028 CCT6AP40227 531 aaKnown RBP20.74■□□□□ 0.91
PTP4A3-206ENST00000524028 TRAPPC10P48553 1259 aa20.74■□□□□ 0.91
PTP4A3-206ENST00000524028 PRSS55Q6UWB4 352 aaPredicted RBP20.74■□□□□ 0.91
PTP4A3-206ENST00000524028 GPR65Q8IYL9 337 aa20.74■□□□□ 0.91
PTP4A3-206ENST00000524028 FAM184AQ8NB25 1140 aa20.74■□□□□ 0.91
PTP4A3-206ENST00000524028 DEPTORQ8TB45 409 aa20.74■□□□□ 0.91
PTP4A3-206ENST00000524028 RHOBTB2Q9BYZ6 727 aa20.74■□□□□ 0.91
PTP4A3-206ENST00000524028 BHMT2Q9H2M3 363 aa20.74■□□□□ 0.91
PTP4A3-206ENST00000524028 LRWD1Q9UFC0 647 aa20.74■□□□□ 0.91
PTP4A3-206ENST00000524028 DPP7Q9UHL4 492 aa20.74■□□□□ 0.91
PTP4A3-206ENST00000524028 PLXNA3P51805 1871 aa20.73■□□□□ 0.91
PTP4A3-206ENST00000524028 KIF4AO95239 1232 aa20.73■□□□□ 0.91
PTP4A3-206ENST00000524028 U2AF2P26368 475 aaKnown RBP eCLIP20.73■□□□□ 0.91
PTP4A3-206ENST00000524028 TDGQ13569 410 aa20.73■□□□□ 0.91
PTP4A3-206ENST00000524028 GNL2Q13823 731 aaKnown RBP20.73■□□□□ 0.91
PTP4A3-206ENST00000524028 TMEM132AQ24JP5 1023 aa20.73■□□□□ 0.91
PTP4A3-206ENST00000524028 HAUS3Q68CZ6 603 aa20.73■□□□□ 0.91
PTP4A3-206ENST00000524028 CYP26C1Q6V0L0 522 aa20.73■□□□□ 0.91
PTP4A3-206ENST00000524028 HDAC7Q8WUI4 952 aa20.73■□□□□ 0.91
PTP4A3-206ENST00000524028 RSAD2Q8WXG1 361 aa20.73■□□□□ 0.91
PTP4A3-206ENST00000524028 SMG7Q92540 1137 aaKnown RBP20.73■□□□□ 0.91
PTP4A3-206ENST00000524028 NT5C3AQ9H0P0 336 aa20.73■□□□□ 0.91
PTP4A3-206ENST00000524028 SH2B1Q9NRF2 756 aaPredicted RBP20.73■□□□□ 0.91
PTP4A3-206ENST00000524028 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.73■□□□□ 0.916e-6■■□□□ 11.7
PTP4A3-206ENST00000524028 KIAA1024Q9UPX6 916 aa20.73■□□□□ 0.91
PTP4A3-206ENST00000524028 PCDHB6Q9Y5E3 794 aa20.73■□□□□ 0.91
PTP4A3-206ENST00000524028 TDRD15B5MCY1 1934 aaKnown RBP20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 C2orf16Q68DN1 1984 aa20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 H0Y858 1186 aa20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 GALR2O43603 387 aaPredicted RBP20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 C1RP00736 705 aa20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 THP07101 528 aa20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 IGFBP6P24592 240 aaPredicted RBP20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 PTGDRQ13258 359 aa20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 PDIA5Q14554 519 aa20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 NT5DC1Q5TFE4 455 aa20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 IGSF22Q8N9C0 903 aa20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 MYADMQ96S97 322 aa20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 PLEKHA4Q9H4M7 779 aa20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 DDX19AQ9NUU7 478 aaKnown RBP20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 NOL7Q9UMY1 257 aaKnown RBP20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 GDAQ9Y2T3 454 aa20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 CLUHO75153 1309 aa20.72■□□□□ 0.91
PTP4A3-206ENST00000524028 SF3B1O75533 1304 aaKnown RBP eCLIP20.72■□□□□ 0.912e-6■■■■■ 52.2
PTP4A3-206ENST00000524028 NUBP1P53384 320 aa20.71■□□□□ 0.91
PTP4A3-206ENST00000524028 PPP2R5AQ15172 486 aa20.71■□□□□ 0.91
PTP4A3-206ENST00000524028 IL17AQ16552 155 aa20.71■□□□□ 0.91
PTP4A3-206ENST00000524028 C8orf34Q49A92 452 aa20.71■□□□□ 0.91
PTP4A3-206ENST00000524028 ASTLQ6HA08 431 aaPredicted RBP20.71■□□□□ 0.91
PTP4A3-206ENST00000524028 ELMSAN1Q6PJG2 1045 aa20.71■□□□□ 0.91
PTP4A3-206ENST00000524028 LNX1Q8TBB1 728 aaPredicted RBP20.71■□□□□ 0.91
PTP4A3-206ENST00000524028 CLSTN3Q9BQT9 956 aa20.71■□□□□ 0.91
PTP4A3-206ENST00000524028 ADPGKQ9BRR6 497 aa20.71■□□□□ 0.91
PTP4A3-206ENST00000524028 ZDHHC7Q9NXF8 308 aa20.71■□□□□ 0.91
PTP4A3-206ENST00000524028 DUSP12Q9UNI6 340 aa20.71■□□□□ 0.91
PTP4A3-206ENST00000524028 CACNA1HO95180 2353 aa20.71■□□□□ 0.91
PTP4A3-206ENST00000524028 PP2D1A8MPX8 630 aa20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 NARSO43776 548 aaKnown RBP20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 NPR3P17342 541 aa20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 GBP2P32456 591 aaPredicted RBP20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 FAM171A1Q5VUB5 890 aa20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 CWF19L1Q69YN2 538 aaKnown RBP20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 CEP57Q86XR8 500 aa20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 SNX29Q8TEQ0 813 aa20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 KIFAP3Q92845 792 aa20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 ATOH1Q92858 354 aaPredicted RBP20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 IFT74Q96LB3 600 aa20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 TTPALQ9BTX7 342 aa20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 PRKD2Q9BZL6 878 aa20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 MFSD1Q9H3U5 465 aa20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 IGSF9Q9P2J2 1179 aa20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 EPS15L1Q9UBC2 864 aa20.7■□□□□ 0.9
PTP4A3-206ENST00000524028 E9PMD0 336 aa20.69■□□□□ 0.9
PTP4A3-206ENST00000524028 ADAM12O43184 909 aa20.69■□□□□ 0.9
PTP4A3-206ENST00000524028 ZMYND10O75800 440 aa20.69■□□□□ 0.9
PTP4A3-206ENST00000524028 EFNA5P52803 228 aa20.69■□□□□ 0.9
PTP4A3-206ENST00000524028 CREMQ03060 361 aa20.69■□□□□ 0.9
PTP4A3-206ENST00000524028 ATF7IP2Q5U623 682 aa20.69■□□□□ 0.9
PTP4A3-206ENST00000524028 DAW1Q8N136 415 aa20.69■□□□□ 0.9
PTP4A3-206ENST00000524028 PIK3R5Q8WYR1 880 aa20.69■□□□□ 0.9
PTP4A3-206ENST00000524028 STAMQ92783 540 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms