RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SPPL3Q8TCT6 385 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 POF1BQ8WVV4 589 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 STAMQ92783 540 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 TMEM169Q96HH4 297 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 TMEM206Q9H813 350 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 ANKFY1Q9P2R3 1169 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 HCSTQ9UBK5 93 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 SERTAD1Q9UHV2 236 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 PUF60Q9UHX1 559 aaKnown RBP13.74□□□□□ -0.21
VEGFA-225ENST00000523950 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-225ENST00000523950 UBE4BO95155 1302 aa13.73□□□□□ -0.21
VEGFA-225ENST00000523950 GRM6O15303 877 aa13.73□□□□□ -0.21
VEGFA-225ENST00000523950 ALDH2P05091 517 aa13.73□□□□□ -0.21
VEGFA-225ENST00000523950 GALTP07902 379 aa13.73□□□□□ -0.21
VEGFA-225ENST00000523950 SCNN1GP51170 649 aa13.73□□□□□ -0.21
VEGFA-225ENST00000523950 NDUFA8P51970 172 aa13.73□□□□□ -0.21
VEGFA-225ENST00000523950 L1TD1Q5T7N2 865 aaKnown RBP13.73□□□□□ -0.21
VEGFA-225ENST00000523950 COLGALT2Q8IYK4 626 aa13.73□□□□□ -0.21
VEGFA-225ENST00000523950 GSTCDQ8NEC7 633 aa13.73□□□□□ -0.21
VEGFA-225ENST00000523950 PPP2R3CQ969Q6 453 aa13.73□□□□□ -0.21
VEGFA-225ENST00000523950 ZFP42Q96MM3 310 aa13.73□□□□□ -0.21
VEGFA-225ENST00000523950 ACAP3Q96P50 834 aa13.73□□□□□ -0.21
VEGFA-225ENST00000523950 ACCSQ96QU6 501 aa13.73□□□□□ -0.21
VEGFA-225ENST00000523950 NSUN3Q9H649 340 aaKnown RBP13.73□□□□□ -0.21
VEGFA-225ENST00000523950 PDCD11Q14690 1871 aaKnown RBP13.73□□□□□ -0.21
VEGFA-225ENST00000523950 CDH23Q9H251 3354 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 CHD7Q9P2D1 2997 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 FSD2A1L4K1 749 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 OGTO15294 1046 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 EIF3DO15371 548 aaKnown RBP eCLIP13.72□□□□□ -0.21
VEGFA-225ENST00000523950 DDHD2O94830 711 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 THP07101 528 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 MATR3P43243 847 aaKnown RBP eCLIP13.72□□□□□ -0.21
VEGFA-225ENST00000523950 AFMP43652 599 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 AFF1P51825 1210 aaKnown RBP13.72□□□□□ -0.21
VEGFA-225ENST00000523950 POU5F1Q01860 360 aaKnown RBP13.72□□□□□ -0.21
VEGFA-225ENST00000523950 EHHADHQ08426 723 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 TUSC3Q13454 348 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 BMS1Q14692 1282 aaKnown RBP13.72□□□□□ -0.21
VEGFA-225ENST00000523950 POSTNQ15063 836 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 ZC2HC1CQ53FD0 456 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-225ENST00000523950 XKR4Q5GH76 650 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 FAM26FQ5R3K3 315 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 KANK3Q6NY19 840 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 ZBTB33Q86T24 672 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 ZNF280BQ86YH2 543 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 PAGE5Q96GU1 130 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 ZBTB45Q96K62 511 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-225ENST00000523950 TSPAN18Q96SJ8 248 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 ALG13Q9NP73 1137 aaKnown RBP13.72□□□□□ -0.21
VEGFA-225ENST00000523950 TLR9Q9NR96 1032 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 MIOSQ9NXC5 875 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 KLK14Q9P0G3 267 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 FAN1Q9Y2M0 1017 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 GDAQ9Y2T3 454 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 STYXL1Q9Y6J8 313 aa13.72□□□□□ -0.21
VEGFA-225ENST00000523950 TRIP11Q15643 1979 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 A0A0B4J269 797 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 PTGESO14684 152 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 NCK2O43639 380 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 ZNF202O95125 648 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 CLTAP09496 248 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 HARSP12081 509 aaKnown RBP13.71□□□□□ -0.21
VEGFA-225ENST00000523950 SLC11A1P49279 550 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 PSMD2Q13200 908 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 CUL4BQ13620 913 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 ALKAL1Q6UXT8 129 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 KRBA2Q6ZNG9 492 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 CEP120Q8N960 986 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 TMEM87AQ8NBN3 555 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 CCDC47Q96A33 483 aaKnown RBP13.71□□□□□ -0.21
VEGFA-225ENST00000523950 IGSF21Q96ID5 467 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 SNX27Q96L92 541 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 COLEC11Q9BWP8 271 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 GBP3Q9H0R5 595 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 BLZF1Q9H2G9 400 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 GOLPH3LQ9H4A5 285 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 PLEKHA5Q9HAU0 1116 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 NGRNQ9NPE2 291 aaKnown RBP13.71□□□□□ -0.21
VEGFA-225ENST00000523950 SLC38A7Q9NVC3 462 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 TBC1D7Q9P0N9 293 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 CNTN3Q9P232 1028 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 DNAJB4Q9UDY4 337 aa13.71□□□□□ -0.21
VEGFA-225ENST00000523950 PRRC2BQ5JSZ5 2229 aaKnown RBP13.7□□□□□ -0.22
VEGFA-225ENST00000523950 NRP1O14786 923 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 KIAA0391O15091 583 aaKnown RBP13.7□□□□□ -0.22
VEGFA-225ENST00000523950 MYBP10242 640 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 KCNE1P15382 129 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 GARTP22102 1010 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 DNAJB1P25685 340 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 PBX3P40426 434 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 OR1G1P47890 313 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 CASP5P51878 434 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 SNRPFP62306 86 aaKnown RBP13.7□□□□□ -0.22
VEGFA-225ENST00000523950 FAM160A1Q05DH4 1040 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 CAMK1Q14012 370 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 SLC39A4Q6P5W5 647 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 DDX53Q86TM3 631 aaKnown RBP13.7□□□□□ -0.22
VEGFA-225ENST00000523950 CD302Q8IX05 232 aa13.7□□□□□ -0.22
VEGFA-225ENST00000523950 SYCP3Q8IZU3 236 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms