RNA–Protein interactions for RNA: ENST00000523799.5

CCNC-215, Transcript of cyclin C, humanhuman

TSL 3 BASIC

Gene CCNC, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-215ENST00000523799 GBP3Q9H0R5 595 aa9.43□□□□□ -0.9
CCNC-215ENST00000523799 RXFP1Q9HBX9 757 aa9.43□□□□□ -0.9
CCNC-215ENST00000523799 ZNF302Q9NR11 478 aa9.43□□□□□ -0.9
CCNC-215ENST00000523799 SEC63Q9UGP8 760 aaKnown RBP9.43□□□□□ -0.9
CCNC-215ENST00000523799 INPP5FQ9Y2H2 1132 aa9.43□□□□□ -0.9
CCNC-215ENST00000523799 FAN1Q9Y2M0 1017 aa9.43□□□□□ -0.9
CCNC-215ENST00000523799 FREM2Q5SZK8 3169 aa9.43□□□□□ -0.9
CCNC-215ENST00000523799 F5P12259 2224 aa9.43□□□□□ -0.9
CCNC-215ENST00000523799 SALL3Q9BXA9 1300 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 SRRM3A6NNA2 597 aaPredicted RBP9.42□□□□□ -0.9
CCNC-215ENST00000523799 GAS2O43903 313 aaKnown RBP9.42□□□□□ -0.9
CCNC-215ENST00000523799 ZNF623O75123 536 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 OFD1O75665 1012 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 KCNK5O95279 499 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 SMARCA1P28370 1054 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 KIF5BP33176 963 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 RAB27AP51159 221 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 CLCN3P51790 818 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 CDC42EP1Q00587 391 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 RING1Q06587 406 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 TROAPQ12815 778 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 ITGB3BPQ13352 177 aaPredicted RBP9.42□□□□□ -0.9
CCNC-215ENST00000523799 FZD5Q13467 585 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 EFCAB12Q6NXP0 572 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 MIS18BP1Q6P0N0 1132 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 CCDC60Q8IWA6 550 aaPredicted RBP9.42□□□□□ -0.9
CCNC-215ENST00000523799 C12orf50Q8NA57 414 aaPredicted RBP9.42□□□□□ -0.9
CCNC-215ENST00000523799 ST13P5Q8NFI4 369 aaPredicted RBP9.42□□□□□ -0.9
CCNC-215ENST00000523799 PIBF1Q8WXW3 757 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 SCLT1Q96NL6 688 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 FAM193BQ96PV7 902 aaPredicted RBP9.42□□□□□ -0.9
CCNC-215ENST00000523799 CDK15Q96Q40 435 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 PHF20Q9BVI0 1012 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 HERC2P3Q9BVR0 1158 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 SPZ1Q9BXG8 430 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 CHRDQ9H2X0 955 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 AGO4Q9HCK5 861 aaKnown RBP9.42□□□□□ -0.9
CCNC-215ENST00000523799 KANSL3Q9P2N6 904 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 PCDHA6Q9UN73 950 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 PCDHA8Q9Y5H6 950 aa9.42□□□□□ -0.9
CCNC-215ENST00000523799 ERICH2A1L162 156 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 MAN2B1O00754 1011 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 SPATA31D3P0C874 917 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 ATP4AP20648 1035 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 GLUD2P49448 558 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 GPC3P51654 580 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 TWF2Q6IBS0 349 aaKnown RBP9.41□□□□□ -0.9
CCNC-215ENST00000523799 SWSAP1Q6NVH7 229 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 SPATA31D4Q6ZUB0 917 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 ZNF280BQ86YH2 543 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 GPR65Q8IYL9 337 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 LINC01465Q8N7H1 131 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 HPS1Q92902 700 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 LPPQ93052 612 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 PGBD4Q96DM1 585 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 LSM14BQ9BX40 385 aaKnown RBP9.41□□□□□ -0.9
CCNC-215ENST00000523799 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.41□□□□□ -0.9
CCNC-215ENST00000523799 FAM105AQ9NUU6 356 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 MAFBQ9Y5Q3 323 aaPredicted RBP9.41□□□□□ -0.9
CCNC-215ENST00000523799 WASF2Q9Y6W5 498 aa9.41□□□□□ -0.9
CCNC-215ENST00000523799 TAF4O00268 1085 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 MEIS1O00470 390 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 NRP1O14786 923 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 TGM5O43548 720 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 DDHD2O94830 711 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 CCNE2O96020 404 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 HNRNPA1P09651 372 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCNC-215ENST00000523799 ZNF806P0C7X5 589 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 MYBP10242 640 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 SFPQP23246 707 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCNC-215ENST00000523799 CXCL12P48061 93 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 SMCPP49901 116 aaPredicted RBP9.4□□□□□ -0.9
CCNC-215ENST00000523799 DSG1Q02413 1049 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 CREMQ03060 361 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 TRDNQ13061 729 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 ARID5BQ14865 1188 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 LONRF3Q496Y0 759 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 CEP55Q53EZ4 464 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 STPG1Q5TH74 334 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 LILRA6Q6PI73 481 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 GRASPQ7Z6J2 395 aaPredicted RBP9.4□□□□□ -0.9
CCNC-215ENST00000523799 CATIPQ7Z7H3 387 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 PALB2Q86YC2 1186 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 TEX2Q8IWB9 1127 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 DNASE1L2Q92874 299 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 FGF13Q92913 245 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 FAM167AQ96KS9 214 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 MAP3K14Q99558 947 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 LZTS2Q9BRK4 669 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 DSCC1Q9BVC3 393 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 GCOM2Q9BZD3 368 aaPredicted RBP9.4□□□□□ -0.9
CCNC-215ENST00000523799 LY9Q9HBG7 655 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 RXFP3Q9NSD7 469 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 FNIP2Q9P278 1114 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 DACH1Q9UI36 760 aa9.4□□□□□ -0.9
CCNC-215ENST00000523799 SDK1Q7Z5N4 2213 aa9.4□□□□□ -0.91
CCNC-215ENST00000523799 TDRD15B5MCY1 1934 aaKnown RBP9.39□□□□□ -0.91
CCNC-215ENST00000523799 CNTNAP2Q9UHC6 1331 aa9.39□□□□□ -0.91
CCNC-215ENST00000523799 DDX39AO00148 427 aaKnown RBP9.39□□□□□ -0.91
CCNC-215ENST00000523799 IFIT3O14879 490 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms