RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 LDAHQ9H6V9 325 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 GIT1Q9Y2X7 761 aa7.23□□□□□ -1.25
CPNE3-207ENST00000523588 HTRA2O43464 458 aaPredicted RBP7.22□□□□□ -1.25
CPNE3-207ENST00000523588 SLC16A1P53985 500 aa7.22□□□□□ -1.25
CPNE3-207ENST00000523588 RRP1BQ14684 758 aaKnown RBP7.22□□□□□ -1.25
CPNE3-207ENST00000523588 PLEKHG6Q3KR16 790 aa7.22□□□□□ -1.25
CPNE3-207ENST00000523588 METTL24Q5JXM2 366 aa7.22□□□□□ -1.25
CPNE3-207ENST00000523588 NAIF1Q69YI7 327 aaPredicted RBP7.22□□□□□ -1.25
CPNE3-207ENST00000523588 CPA6Q8N4T0 437 aa7.22□□□□□ -1.25
CPNE3-207ENST00000523588 ATXN2LQ8WWM7 1075 aaKnown RBP7.22□□□□□ -1.25
CPNE3-207ENST00000523588 EXTL1Q92935 676 aa7.22□□□□□ -1.25
CPNE3-207ENST00000523588 UHRF1Q96T88 793 aaPredicted RBP7.22□□□□□ -1.25
CPNE3-207ENST00000523588 C7orf25Q9BPX7 421 aa7.22□□□□□ -1.25
CPNE3-207ENST00000523588 TCF7L1Q9HCS4 588 aa7.22□□□□□ -1.25
CPNE3-207ENST00000523588 SAP30BPQ9UHR5 308 aaKnown RBP7.22□□□□□ -1.25
CPNE3-207ENST00000523588 LUC7L2Q9Y383 392 aaKnown RBP7.22□□□□□ -1.25
CPNE3-207ENST00000523588 CCDC154A6NI56 674 aa7.21□□□□□ -1.26
CPNE3-207ENST00000523588 TBKBP1A7MCY6 615 aa7.21□□□□□ -1.26
CPNE3-207ENST00000523588 B5MCH6 92 aa7.21□□□□□ -1.26
CPNE3-207ENST00000523588 AMY1AP04745 511 aa7.21□□□□□ -1.26
CPNE3-207ENST00000523588 SP140Q13342 867 aa7.21□□□□□ -1.26
CPNE3-207ENST00000523588 C3orf36Q3SXR2 165 aa7.21□□□□□ -1.26
CPNE3-207ENST00000523588 DCAF17Q5H9S7 520 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-207ENST00000523588 IL17DQ8TAD2 202 aa7.21□□□□□ -1.26
CPNE3-207ENST00000523588 SLC35B2Q8TB61 432 aa7.21□□□□□ -1.26
CPNE3-207ENST00000523588 STON2Q8WXE9 905 aa7.21□□□□□ -1.26
CPNE3-207ENST00000523588 CYFIP2Q96F07 1278 aa7.21□□□□□ -1.26
CPNE3-207ENST00000523588 MNTQ99583 582 aa7.21□□□□□ -1.26
CPNE3-207ENST00000523588 GPR20Q99678 358 aa7.21□□□□□ -1.26
CPNE3-207ENST00000523588 AASDHPPTQ9NRN7 309 aa7.21□□□□□ -1.26
CPNE3-207ENST00000523588 LANCL2Q9NS86 450 aa7.21□□□□□ -1.26
CPNE3-207ENST00000523588 AJAP1Q9UKB5 411 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-207ENST00000523588 THRAP3Q9Y2W1 955 aaKnown RBP7.21□□□□□ -1.26
CPNE3-207ENST00000523588 XDHP47989 1333 aa7.21□□□□□ -1.26
CPNE3-207ENST00000523588 CXorf49A8MYA2 514 aaPredicted RBP7.2□□□□□ -1.26
CPNE3-207ENST00000523588 ABLIM3O94929 683 aa7.2□□□□□ -1.26
CPNE3-207ENST00000523588 HK1P19367 917 aa7.2□□□□□ -1.26
CPNE3-207ENST00000523588 FPR1P21462 350 aa7.2□□□□□ -1.26
CPNE3-207ENST00000523588 PCSK1P29120 753 aa7.2□□□□□ -1.26
CPNE3-207ENST00000523588 MAN2A2P49641 1150 aa7.2□□□□□ -1.26
CPNE3-207ENST00000523588 ATP8B2P98198 1209 aa7.2□□□□□ -1.26
CPNE3-207ENST00000523588 BMT2Q1RMZ1 405 aa7.2□□□□□ -1.26
CPNE3-207ENST00000523588 SPRED1Q7Z699 444 aa7.2□□□□□ -1.26
CPNE3-207ENST00000523588 ZGPATQ8N5A5 531 aaKnown RBP7.2□□□□□ -1.26
CPNE3-207ENST00000523588 CASKIN2Q8WXE0 1202 aa7.2□□□□□ -1.26
CPNE3-207ENST00000523588 GPR87Q9BY21 358 aa7.2□□□□□ -1.26
CPNE3-207ENST00000523588 KRTAP4-2Q9BYR5 136 aa7.2□□□□□ -1.26
CPNE3-207ENST00000523588 SENP6Q9GZR1 1112 aaPredicted RBP7.2□□□□□ -1.26
CPNE3-207ENST00000523588 MANSC1Q9H8J5 431 aa7.2□□□□□ -1.26
CPNE3-207ENST00000523588 PCDHA13Q9Y5I0 950 aa7.2□□□□□ -1.26
CPNE3-207ENST00000523588 PJA2O43164 708 aa7.19□□□□□ -1.26
CPNE3-207ENST00000523588 IL2RBP14784 551 aa7.19□□□□□ -1.26
CPNE3-207ENST00000523588 MTM1Q13496 603 aa7.19□□□□□ -1.26
CPNE3-207ENST00000523588 IL10RAQ13651 578 aa7.19□□□□□ -1.26
CPNE3-207ENST00000523588 VPS72Q15906 364 aa7.19□□□□□ -1.26
CPNE3-207ENST00000523588 USP39Q53GS9 565 aaKnown RBP7.19□□□□□ -1.26
CPNE3-207ENST00000523588 AFMIDQ63HM1 303 aa7.19□□□□□ -1.26
CPNE3-207ENST00000523588 MIGA2Q7L4E1 593 aa7.19□□□□□ -1.26
CPNE3-207ENST00000523588 TMPRSS6Q8IU80 811 aa7.19□□□□□ -1.26
CPNE3-207ENST00000523588 RHOT1Q8IXI2 618 aa7.19□□□□□ -1.26
CPNE3-207ENST00000523588 CCHCR1Q8TD31 782 aa7.19□□□□□ -1.26
CPNE3-207ENST00000523588 SH3RF3Q8TEJ3 882 aaPredicted RBP7.19□□□□□ -1.26
CPNE3-207ENST00000523588 HDAC10Q969S8 669 aa7.19□□□□□ -1.26
CPNE3-207ENST00000523588 PGBD4Q96DM1 585 aa7.19□□□□□ -1.26
CPNE3-207ENST00000523588 AURKAIP1Q9NWT8 199 aaPredicted RBP7.19□□□□□ -1.26
CPNE3-207ENST00000523588 HDAC5Q9UQL6 1122 aa7.19□□□□□ -1.26
CPNE3-207ENST00000523588 PNPLA7Q6ZV29 1317 aa7.19□□□□□ -1.26
CPNE3-207ENST00000523588 GRXCR1A8MXD5 290 aa7.18□□□□□ -1.26
CPNE3-207ENST00000523588 GOLGA6L6A8MZA4 724 aa7.18□□□□□ -1.26
CPNE3-207ENST00000523588 AKAP10O43572 662 aa7.18□□□□□ -1.26
CPNE3-207ENST00000523588 ALDH1A3P47895 512 aa7.18□□□□□ -1.26
CPNE3-207ENST00000523588 TARDBPQ13148 414 aaKnown RBP eCLIP7.18□□□□□ -1.26
CPNE3-207ENST00000523588 CRHR2Q13324 411 aa7.18□□□□□ -1.26
CPNE3-207ENST00000523588 UAP1L1Q3KQV9 507 aa7.18□□□□□ -1.26
CPNE3-207ENST00000523588 DRICH1Q6PGQ1 229 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-207ENST00000523588 RNF207Q6ZRF8 634 aa7.18□□□□□ -1.26
CPNE3-207ENST00000523588 C1orf210Q8IVY1 113 aa7.18□□□□□ -1.26
CPNE3-207ENST00000523588 RAVER1Q8IY67 606 aaKnown RBP7.18□□□□□ -1.26
CPNE3-207ENST00000523588 KRTAP9-3Q9BYQ3 159 aa7.18□□□□□ -1.26
CPNE3-207ENST00000523588 ZNF703Q9H7S9 590 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-207ENST00000523588 TMEM140Q9NV12 185 aa7.18□□□□□ -1.26
CPNE3-207ENST00000523588 CEP72Q9P209 647 aa7.18□□□□□ -1.26
CPNE3-207ENST00000523588 IP6K2Q9UHH9 426 aa7.18□□□□□ -1.26
CPNE3-207ENST00000523588 ACTL7AQ9Y615 435 aa7.18□□□□□ -1.26
CPNE3-207ENST00000523588 PRR5-ARHGAP8B1AHC4 643 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 GPR32O75388 356 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 INSRRP14616 1297 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 RAB27AP51159 221 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 PTTG1IPP53801 180 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 PTH1RQ03431 593 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 PIN1Q13526 163 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-207ENST00000523588 CNGB1Q14028 1251 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-207ENST00000523588 ODR4Q5SWX8 454 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 OTUD7BQ6GQQ9 843 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 SYT12Q8IV01 421 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 MIER2Q8N344 545 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 RAB24Q969Q5 203 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 HSPBAP1Q96EW2 488 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 MRI1Q9BV20 369 aa7.17□□□□□ -1.26
CPNE3-207ENST00000523588 RTFDC1Q9BY42 306 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms